BLASTX nr result

ID: Coptis25_contig00025853 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025853
         (861 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262994.1| PREDICTED: uncharacterized protein At5g64816...   219   8e-55
ref|XP_002301092.1| predicted protein [Populus trichocarpa] gi|2...   217   3e-54
ref|XP_002307342.1| predicted protein [Populus trichocarpa] gi|2...   217   3e-54
dbj|BAA97293.1| unnamed protein product [Arabidopsis thaliana]        215   9e-54
ref|XP_002527373.1| conserved hypothetical protein [Ricinus comm...   215   9e-54

>ref|XP_002262994.1| PREDICTED: uncharacterized protein At5g64816 isoform 1 [Vitis
           vinifera] gi|359476416|ref|XP_003631833.1| PREDICTED:
           uncharacterized protein At5g64816 isoform 2 [Vitis
           vinifera] gi|359476418|ref|XP_003631834.1| PREDICTED:
           uncharacterized protein At5g64816 isoform 3 [Vitis
           vinifera]
          Length = 126

 Score =  219 bits (557), Expect = 8e-55
 Identities = 100/114 (87%), Positives = 108/114 (94%)
 Frame = +3

Query: 309 MVDVWWSLLGATVPALVTAQALRMKRRRAEEQRIKSARGREKSSDDVFVCERVCTSKRML 488
           MV+VWWSLLGA +PA+V  QALRMKRR AEEQRIKSARGREK+SD++FVCERVCTSKRML
Sbjct: 1   MVEVWWSLLGAAIPAIVAGQALRMKRRHAEEQRIKSARGREKTSDEIFVCERVCTSKRML 60

Query: 489 KRVGAFSKDPTPDTCVTVCGVSELDACSDACARTVCVNQHQVPNWNDICLRRCQ 650
           K+VG FSKDP+ DTCVTVCGVSELDACSDACARTVCVNQHQVPNWNDICLRRCQ
Sbjct: 61  KKVGTFSKDPSHDTCVTVCGVSELDACSDACARTVCVNQHQVPNWNDICLRRCQ 114


>ref|XP_002301092.1| predicted protein [Populus trichocarpa] gi|222842818|gb|EEE80365.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score =  217 bits (552), Expect = 3e-54
 Identities = 98/114 (85%), Positives = 108/114 (94%)
 Frame = +3

Query: 309 MVDVWWSLLGATVPALVTAQALRMKRRRAEEQRIKSARGREKSSDDVFVCERVCTSKRML 488
           MVD WWSLLGA +PA++  QALRMK+RRA+EQR+KSARGREKSSD++FVCERVCTSKRML
Sbjct: 1   MVDPWWSLLGAAIPAIIAGQALRMKKRRADEQRLKSARGREKSSDEIFVCERVCTSKRML 60

Query: 489 KRVGAFSKDPTPDTCVTVCGVSELDACSDACARTVCVNQHQVPNWNDICLRRCQ 650
           K+VGA SKDPT DTCVTVCGVSELDAC+DACARTVCVNQHQVPNWNDICLRRCQ
Sbjct: 61  KKVGALSKDPTIDTCVTVCGVSELDACADACARTVCVNQHQVPNWNDICLRRCQ 114


>ref|XP_002307342.1| predicted protein [Populus trichocarpa]
           gi|224148058|ref|XP_002336584.1| predicted protein
           [Populus trichocarpa] gi|222836242|gb|EEE74663.1|
           predicted protein [Populus trichocarpa]
           gi|222856791|gb|EEE94338.1| predicted protein [Populus
           trichocarpa]
          Length = 127

 Score =  217 bits (552), Expect = 3e-54
 Identities = 98/114 (85%), Positives = 108/114 (94%)
 Frame = +3

Query: 309 MVDVWWSLLGATVPALVTAQALRMKRRRAEEQRIKSARGREKSSDDVFVCERVCTSKRML 488
           MVD WWSLLGA +PA++  QALRMK+RRA+EQR+KSARGREKSSD++FVCERVCTSKRML
Sbjct: 1   MVDPWWSLLGAAIPAIIAGQALRMKKRRADEQRLKSARGREKSSDEIFVCERVCTSKRML 60

Query: 489 KRVGAFSKDPTPDTCVTVCGVSELDACSDACARTVCVNQHQVPNWNDICLRRCQ 650
           K+VGA SKDPT DTCVTVCGVSELDAC+DACARTVCVNQHQVPNWNDICLRRCQ
Sbjct: 61  KKVGALSKDPTIDTCVTVCGVSELDACADACARTVCVNQHQVPNWNDICLRRCQ 114


>dbj|BAA97293.1| unnamed protein product [Arabidopsis thaliana]
          Length = 651

 Score =  215 bits (548), Expect = 9e-54
 Identities = 99/121 (81%), Positives = 108/121 (89%)
 Frame = +3

Query: 288 QNFSKADMVDVWWSLLGATVPALVTAQALRMKRRRAEEQRIKSARGREKSSDDVFVCERV 467
           Q   K  MV+VWWSL+GA VPAL+  QA R+K+R  EE+RIKSARGREKSSD++FVCERV
Sbjct: 515 QVLKKRKMVEVWWSLIGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERV 574

Query: 468 CTSKRMLKRVGAFSKDPTPDTCVTVCGVSELDACSDACARTVCVNQHQVPNWNDICLRRC 647
           CTSKRMLK+VGAFSKDP PDTCVTVCGVSELDACSDACARTVCVNQHQV NWNDICLRRC
Sbjct: 575 CTSKRMLKKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRC 634

Query: 648 Q 650
           Q
Sbjct: 635 Q 635


>ref|XP_002527373.1| conserved hypothetical protein [Ricinus communis]
           gi|223533292|gb|EEF35045.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 127

 Score =  215 bits (548), Expect = 9e-54
 Identities = 96/114 (84%), Positives = 108/114 (94%)
 Frame = +3

Query: 309 MVDVWWSLLGATVPALVTAQALRMKRRRAEEQRIKSARGREKSSDDVFVCERVCTSKRML 488
           MVD WWSLLGA +PA++  QA+RMK++RAEEQR+KSARGREKSSD++FVCERVCTSKRML
Sbjct: 1   MVDPWWSLLGAAIPAVIAGQAIRMKKKRAEEQRLKSARGREKSSDEIFVCERVCTSKRML 60

Query: 489 KRVGAFSKDPTPDTCVTVCGVSELDACSDACARTVCVNQHQVPNWNDICLRRCQ 650
           K+VGA SKDPT DTCVTVCGVSELDAC+DACARTVCVNQHQVPNWND+CLRRCQ
Sbjct: 61  KKVGALSKDPTIDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDVCLRRCQ 114


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