BLASTX nr result

ID: Coptis25_contig00025829 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025829
         (583 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002437117.1| hypothetical protein SORBIDRAFT_10g021300 [S...    78   1e-28
ref|NP_001143743.1| uncharacterized protein LOC100276497 [Zea ma...    76   2e-27
gb|ACN35589.1| unknown [Zea mays] gi|413954108|gb|AFW86757.1| hy...    75   3e-27
gb|AFW86755.1| hypothetical protein ZEAMMB73_026457 [Zea mays]         75   4e-27
gb|AFW86756.1| hypothetical protein ZEAMMB73_026457 [Zea mays]         75   4e-27

>ref|XP_002437117.1| hypothetical protein SORBIDRAFT_10g021300 [Sorghum bicolor]
           gi|241915340|gb|EER88484.1| hypothetical protein
           SORBIDRAFT_10g021300 [Sorghum bicolor]
          Length = 382

 Score = 77.8 bits (190), Expect(2) = 1e-28
 Identities = 35/67 (52%), Positives = 43/67 (64%)
 Frame = -1

Query: 364 EPXXXXXXXIVPEFPLKIGIIGLGEFGQFLAKAFKRQGHNVLGTSRSDYSEYCQEHGIEF 185
           +P        VP  PL++GI+G G FGQF+A   +RQGH VL  SRSDYS YC  HGI F
Sbjct: 78  DPPAASSAAAVPAAPLRVGIVGFGNFGQFIAGGLQRQGHVVLAASRSDYSVYCASHGIRF 137

Query: 184 YRHVNGL 164
           +R V+ L
Sbjct: 138 FRSVDAL 144



 Score = 73.9 bits (180), Expect(2) = 1e-28
 Identities = 36/48 (75%), Positives = 42/48 (87%)
 Frame = -3

Query: 146 VNGLCEAQPDVILICSSILSTEDVVRKIPFRKPKQNTILADVLSVKEY 3
           V+ LCE QPDV+LICSSILSTE VVR IPFRK + +TI+ADVLSVKE+
Sbjct: 141 VDALCEEQPDVLLICSSILSTEGVVRAIPFRKLRHDTIVADVLSVKEF 188


>ref|NP_001143743.1| uncharacterized protein LOC100276497 [Zea mays]
           gi|195626078|gb|ACG34869.1| hypothetical protein [Zea
           mays]
          Length = 302

 Score = 76.3 bits (186), Expect(2) = 2e-27
 Identities = 32/53 (60%), Positives = 40/53 (75%)
 Frame = -1

Query: 322 PLKIGIIGLGEFGQFLAKAFKRQGHNVLGTSRSDYSEYCQEHGIEFYRHVNGL 164
           PL++GI+G G FGQF+A   +RQGH VL  SRSDYS YC +HGI F+R V+ L
Sbjct: 85  PLRVGIVGFGNFGQFIAGGVQRQGHTVLAASRSDYSAYCAQHGIRFFRSVDAL 137



 Score = 72.0 bits (175), Expect(2) = 2e-27
 Identities = 35/48 (72%), Positives = 41/48 (85%)
 Frame = -3

Query: 146 VNGLCEAQPDVILICSSILSTEDVVRKIPFRKPKQNTILADVLSVKEY 3
           V+ LCE QPDV+LICSSILSTE VVR IPF K + +TI+ADVLSVKE+
Sbjct: 134 VDALCEEQPDVLLICSSILSTESVVRAIPFHKLRPDTIVADVLSVKEF 181


>gb|ACN35589.1| unknown [Zea mays] gi|413954108|gb|AFW86757.1| hypothetical protein
           ZEAMMB73_026457 [Zea mays]
          Length = 392

 Score = 75.1 bits (183), Expect(2) = 3e-27
 Identities = 31/53 (58%), Positives = 40/53 (75%)
 Frame = -1

Query: 322 PLKIGIIGLGEFGQFLAKAFKRQGHNVLGTSRSDYSEYCQEHGIEFYRHVNGL 164
           PL++GI+G G FGQF+A   +RQGH VL  SR+DYS YC +HGI F+R V+ L
Sbjct: 85  PLRVGIVGFGNFGQFIAGGVQRQGHTVLAASRTDYSAYCAQHGIRFFRSVDAL 137



 Score = 72.0 bits (175), Expect(2) = 3e-27
 Identities = 35/48 (72%), Positives = 41/48 (85%)
 Frame = -3

Query: 146 VNGLCEAQPDVILICSSILSTEDVVRKIPFRKPKQNTILADVLSVKEY 3
           V+ LCE QPDV+LICSSILSTE VVR IPF K + +TI+ADVLSVKE+
Sbjct: 134 VDALCEEQPDVLLICSSILSTESVVRAIPFHKLRPDTIVADVLSVKEF 181


>gb|AFW86755.1| hypothetical protein ZEAMMB73_026457 [Zea mays]
          Length = 255

 Score = 75.1 bits (183), Expect(2) = 4e-27
 Identities = 31/53 (58%), Positives = 40/53 (75%)
 Frame = -1

Query: 322 PLKIGIIGLGEFGQFLAKAFKRQGHNVLGTSRSDYSEYCQEHGIEFYRHVNGL 164
           PL++GI+G G FGQF+A   +RQGH VL  SR+DYS YC +HGI F+R V+ L
Sbjct: 85  PLRVGIVGFGNFGQFIAGGVQRQGHTVLAASRTDYSAYCAQHGIRFFRSVDAL 137



 Score = 72.0 bits (175), Expect(2) = 4e-27
 Identities = 35/48 (72%), Positives = 41/48 (85%)
 Frame = -3

Query: 146 VNGLCEAQPDVILICSSILSTEDVVRKIPFRKPKQNTILADVLSVKEY 3
           V+ LCE QPDV+LICSSILSTE VVR IPF K + +TI+ADVLSVKE+
Sbjct: 134 VDALCEEQPDVLLICSSILSTESVVRAIPFHKLRPDTIVADVLSVKEF 181


>gb|AFW86756.1| hypothetical protein ZEAMMB73_026457 [Zea mays]
          Length = 253

 Score = 75.1 bits (183), Expect(2) = 4e-27
 Identities = 31/53 (58%), Positives = 40/53 (75%)
 Frame = -1

Query: 322 PLKIGIIGLGEFGQFLAKAFKRQGHNVLGTSRSDYSEYCQEHGIEFYRHVNGL 164
           PL++GI+G G FGQF+A   +RQGH VL  SR+DYS YC +HGI F+R V+ L
Sbjct: 85  PLRVGIVGFGNFGQFIAGGVQRQGHTVLAASRTDYSAYCAQHGIRFFRSVDAL 137



 Score = 72.0 bits (175), Expect(2) = 4e-27
 Identities = 35/48 (72%), Positives = 41/48 (85%)
 Frame = -3

Query: 146 VNGLCEAQPDVILICSSILSTEDVVRKIPFRKPKQNTILADVLSVKEY 3
           V+ LCE QPDV+LICSSILSTE VVR IPF K + +TI+ADVLSVKE+
Sbjct: 134 VDALCEEQPDVLLICSSILSTESVVRAIPFHKLRPDTIVADVLSVKEF 181


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