BLASTX nr result

ID: Coptis25_contig00025809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025809
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634726.1| PREDICTED: uncharacterized protein LOC100853...    99   3e-19
ref|XP_002330921.1| predicted protein [Populus trichocarpa] gi|2...    98   8e-19
ref|NP_001050362.1| Os03g0414400 [Oryza sativa Japonica Group] g...    97   1e-18
ref|XP_002525915.1| conserved hypothetical protein [Ricinus comm...    92   3e-17
gb|AFW79255.1| hypothetical protein ZEAMMB73_970258 [Zea mays]         92   6e-17

>ref|XP_003634726.1| PREDICTED: uncharacterized protein LOC100853072 [Vitis vinifera]
           gi|297737443|emb|CBI26644.3| unnamed protein product
           [Vitis vinifera]
          Length = 111

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 47/79 (59%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
 Frame = -3

Query: 416 FISASQITSLGMCKKCGDLRVIACSRCKGSSLVKSNA-LNFSLVDDIFQSLGAQKTNKGS 240
           FISASQ  SLGMCKKCGDL++IACS+CKG   VK+ A  +F+LVDD++QS    ++   S
Sbjct: 31  FISASQRRSLGMCKKCGDLKMIACSKCKGVGSVKAGAPFSFNLVDDLYQSFWGDESKVRS 90

Query: 239 IACSNCQGRGRMNCLDCSK 183
            AC +CQGRG  +C DCSK
Sbjct: 91  TACPSCQGRGHFSCPDCSK 109


>ref|XP_002330921.1| predicted protein [Populus trichocarpa] gi|222873115|gb|EEF10246.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 48/79 (60%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
 Frame = -3

Query: 416 FISASQITSLGMCKKCGDLRVIACSRCKGSSLVK-SNALNFSLVDDIFQSLGAQKTNKGS 240
           FISASQ +SLGMCK+CGDLR+IACS CKG+ LVK   AL+F+ +DD+++SLG     K +
Sbjct: 31  FISASQRSSLGMCKRCGDLRMIACSGCKGTGLVKEGGALSFTFIDDMYESLGGDSKVK-T 89

Query: 239 IACSNCQGRGRMNCLDCSK 183
           I CS CQ RGR  C +CSK
Sbjct: 90  IRCSKCQARGRFCCPECSK 108


>ref|NP_001050362.1| Os03g0414400 [Oryza sativa Japonica Group]
           gi|41469078|gb|AAS07052.1| expressed protein [Oryza
           sativa Japonica Group] gi|108708805|gb|ABF96600.1|
           expressed protein [Oryza sativa Japonica Group]
           gi|113548833|dbj|BAF12276.1| Os03g0414400 [Oryza sativa
           Japonica Group] gi|125544312|gb|EAY90451.1| hypothetical
           protein OsI_12037 [Oryza sativa Indica Group]
           gi|125586657|gb|EAZ27321.1| hypothetical protein
           OsJ_11261 [Oryza sativa Japonica Group]
           gi|215704738|dbj|BAG94766.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765188|dbj|BAG86885.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 111

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 42/79 (53%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
 Frame = -3

Query: 416 FISASQITSLGMCKKCGDLRVIACSRCKG-SSLVKSNALNFSLVDDIFQSLGAQKTNKGS 240
           FI++SQ TSLGMCKKCGDLR++ACS+CKG  S+ K     F ++DDI++SLGA+      
Sbjct: 31  FIASSQRTSLGMCKKCGDLRIVACSQCKGVGSVRKGGLFTFGMLDDIYESLGAETKTSNL 90

Query: 239 IACSNCQGRGRMNCLDCSK 183
           + C+NC+ +GR+ C +CSK
Sbjct: 91  VPCTNCRSKGRLLCPECSK 109


>ref|XP_002525915.1| conserved hypothetical protein [Ricinus communis]
           gi|223534744|gb|EEF36435.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 109

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 42/78 (53%), Positives = 60/78 (76%), Gaps = 1/78 (1%)
 Frame = -3

Query: 416 FISASQITSLGMCKKCGDLRVIACSRCKGSSLVKSNA-LNFSLVDDIFQSLGAQKTNKGS 240
           FIS+SQ +SLGMCK CGDLR++ACS+C+G  +VK++   +F+++DD++QSLG +   K +
Sbjct: 31  FISSSQRSSLGMCKTCGDLRMVACSKCRGIGVVKADGPFSFNMMDDLYQSLGGEPKVK-T 89

Query: 239 IACSNCQGRGRMNCLDCS 186
             CS CQ RGR +C DCS
Sbjct: 90  FKCSKCQARGRFSCPDCS 107


>gb|AFW79255.1| hypothetical protein ZEAMMB73_970258 [Zea mays]
          Length = 159

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 38/79 (48%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
 Frame = -3

Query: 416 FISASQITSLGMCKKCGDLRVIACSRCKGSSLVKSNA-LNFSLVDDIFQSLGAQKTNKGS 240
           FI++SQ  SLGMCK+CGDLR++ACS+CKG+   +S   L+  ++DD+++SLGA+   +  
Sbjct: 79  FIASSQRRSLGMCKRCGDLRIVACSQCKGTGSARSGGMLSLGMLDDLYESLGAEAKTENL 138

Query: 239 IACSNCQGRGRMNCLDCSK 183
           + C+ C+ RGR+ C +CSK
Sbjct: 139 VPCTKCRSRGRLLCPECSK 157


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