BLASTX nr result

ID: Coptis25_contig00025808 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025808
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003634726.1| PREDICTED: uncharacterized protein LOC100853...   160   8e-38
ref|XP_002330921.1| predicted protein [Populus trichocarpa] gi|2...   148   5e-34
ref|XP_002525915.1| conserved hypothetical protein [Ricinus comm...   144   7e-33
ref|NP_001050362.1| Os03g0414400 [Oryza sativa Japonica Group] g...   143   1e-32
gb|AFK48336.1| unknown [Lotus japonicus]                              142   2e-32

>ref|XP_003634726.1| PREDICTED: uncharacterized protein LOC100853072 [Vitis vinifera]
           gi|297737443|emb|CBI26644.3| unnamed protein product
           [Vitis vinifera]
          Length = 111

 Score =  160 bits (406), Expect = 8e-38
 Identities = 78/109 (71%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
 Frame = +1

Query: 46  MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDLRVIACSKCKGS 225
           MENITASELAG GVGTLL CATIAAP+VD+FISASQR SLGMCKKCGDL++IACSKCKG 
Sbjct: 1   MENITASELAGFGVGTLLLCATIAAPRVDSFISASQRRSLGMCKKCGDLKMIACSKCKGV 60

Query: 226 GLVKSNA-LNFSLVDDIFQSLGAQKSNERSIACSNCQGRGRMNCSDCSK 369
           G VK+ A  +F+LVDD++QS    +S  RS AC +CQGRG  +C DCSK
Sbjct: 61  GSVKAGAPFSFNLVDDLYQSFWGDESKVRSTACPSCQGRGHFSCPDCSK 109


>ref|XP_002330921.1| predicted protein [Populus trichocarpa] gi|222873115|gb|EEF10246.1|
           predicted protein [Populus trichocarpa]
          Length = 112

 Score =  148 bits (373), Expect = 5e-34
 Identities = 70/109 (64%), Positives = 89/109 (81%), Gaps = 1/109 (0%)
 Frame = +1

Query: 46  MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDLRVIACSKCKGS 225
           M N+T+SE+AG GVG LL CATI+APK+D+FISASQR+SLGMCK+CGDLR+IACS CKG+
Sbjct: 1   MNNLTSSEVAGFGVGALLLCATISAPKIDSFISASQRSSLGMCKRCGDLRMIACSGCKGT 60

Query: 226 GLVK-SNALNFSLVDDIFQSLGAQKSNERSIACSNCQGRGRMNCSDCSK 369
           GLVK   AL+F+ +DD+++SLG   S  ++I CS CQ RGR  C +CSK
Sbjct: 61  GLVKEGGALSFTFIDDMYESLGGD-SKVKTIRCSKCQARGRFCCPECSK 108


>ref|XP_002525915.1| conserved hypothetical protein [Ricinus communis]
           gi|223534744|gb|EEF36435.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 109

 Score =  144 bits (363), Expect = 7e-33
 Identities = 66/108 (61%), Positives = 88/108 (81%), Gaps = 1/108 (0%)
 Frame = +1

Query: 46  MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDLRVIACSKCKGS 225
           M NITASE+AGLGVG+LL C  IAAPK+D+FIS+SQR+SLGMCK CGDLR++ACSKC+G 
Sbjct: 1   MNNITASEIAGLGVGSLLLCCAIAAPKIDSFISSSQRSSLGMCKTCGDLRMVACSKCRGI 60

Query: 226 GLVKSNA-LNFSLVDDIFQSLGAQKSNERSIACSNCQGRGRMNCSDCS 366
           G+VK++   +F+++DD++QSLG +    ++  CS CQ RGR +C DCS
Sbjct: 61  GVVKADGPFSFNMMDDLYQSLGGE-PKVKTFKCSKCQARGRFSCPDCS 107


>ref|NP_001050362.1| Os03g0414400 [Oryza sativa Japonica Group]
           gi|41469078|gb|AAS07052.1| expressed protein [Oryza
           sativa Japonica Group] gi|108708805|gb|ABF96600.1|
           expressed protein [Oryza sativa Japonica Group]
           gi|113548833|dbj|BAF12276.1| Os03g0414400 [Oryza sativa
           Japonica Group] gi|125544312|gb|EAY90451.1| hypothetical
           protein OsI_12037 [Oryza sativa Indica Group]
           gi|125586657|gb|EAZ27321.1| hypothetical protein
           OsJ_11261 [Oryza sativa Japonica Group]
           gi|215704738|dbj|BAG94766.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|215765188|dbj|BAG86885.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 111

 Score =  143 bits (361), Expect = 1e-32
 Identities = 64/109 (58%), Positives = 85/109 (77%), Gaps = 1/109 (0%)
 Frame = +1

Query: 46  MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDLRVIACSKCKGS 225
           ME +T+SE+AG GVG LL CATIAA +VD FI++SQRTSLGMCKKCGDLR++ACS+CKG 
Sbjct: 1   MEGLTSSEIAGFGVGALLVCATIAAQRVDGFIASSQRTSLGMCKKCGDLRIVACSQCKGV 60

Query: 226 GLVKSNAL-NFSLVDDIFQSLGAQKSNERSIACSNCQGRGRMNCSDCSK 369
           G V+   L  F ++DDI++SLGA+      + C+NC+ +GR+ C +CSK
Sbjct: 61  GSVRKGGLFTFGMLDDIYESLGAETKTSNLVPCTNCRSKGRLLCPECSK 109


>gb|AFK48336.1| unknown [Lotus japonicus]
          Length = 110

 Score =  142 bits (359), Expect = 2e-32
 Identities = 65/109 (59%), Positives = 87/109 (79%), Gaps = 1/109 (0%)
 Frame = +1

Query: 46  MENITASELAGLGVGTLLFCATIAAPKVDAFISASQRTSLGMCKKCGDLRVIACSKCKGS 225
           M+NITASE+AGLGVG LL  ATIAAPK+DAF S+SQR+SLGMCK+CG++R +ACS+CKG+
Sbjct: 1   MDNITASEIAGLGVGVLLLSATIAAPKIDAFFSSSQRSSLGMCKRCGNIRRLACSRCKGT 60

Query: 226 GLVKSNAL-NFSLVDDIFQSLGAQKSNERSIACSNCQGRGRMNCSDCSK 369
           G VK   L   +LVDD+++++G ++S  + IAC  CQ +G  +C DCSK
Sbjct: 61  GFVKEGGLFGINLVDDLYETIGNRESTVKQIACVKCQAKGYFSCPDCSK 109


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