BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025801
         (222 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containi...    82   6e-14
ref|XP_002309562.1| predicted protein [Populus trichocarpa] gi|2...    75   6e-12
ref|XP_002309564.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-11
ref|XP_003619848.1| CCP [Medicago truncatula] gi|355494863|gb|AE...    72   5e-11

>ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 37/71 (52%), Positives = 50/71 (70%)
 Frame = -2

Query: 218 KSGTLGVDEALGLFNKLIQTRPLPCIFPFTQLLGALVKMKHFSVALSMSKRMDAAGIQPD 39
           KSG   +D+A+ LF +LI   PLP +  F  +LG++VKMKH+  A+S+SK+M   GI P 
Sbjct: 53  KSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPS 112

Query: 38  VVTLSTLINCY 6
           +VTLS LINCY
Sbjct: 113 IVTLSILINCY 123


>ref|XP_002309562.1| predicted protein [Populus trichocarpa] gi|222855538|gb|EEE93085.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 33/67 (49%), Positives = 50/67 (74%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 VDEALGLFNKLIQTRPLPCIFPFTQLLGALVKM-KHFSVALSMSKRMDAAGIQPDVVTLS 24
           +D+AL  FN ++   PLPCI  FT+LL A+VKM +++   +S+SK+M+ AG+ PD+ TLS
Sbjct: 75  IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134

Query: 23  TLINCYS 3
            LI+C+S
Sbjct: 135 ILIDCFS 141


>ref|XP_002309564.1| predicted protein [Populus trichocarpa] gi|222855540|gb|EEE93087.1|
           predicted protein [Populus trichocarpa]
          Length = 593

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 32/67 (47%), Positives = 51/67 (76%), Gaps = 1/67 (1%)
 Frame = -2

Query: 200 VDEALGLFNKLIQTRPLPCIFPFTQLLGALVKM-KHFSVALSMSKRMDAAGIQPDVVTLS 24
           +D+AL  FN ++  +PLPCI  FT+LL A+VKM +++   +S++K+M+ AG+ P++ TLS
Sbjct: 78  IDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLS 137

Query: 23  TLINCYS 3
            LINC+S
Sbjct: 138 ILINCFS 144


>ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/65 (52%), Positives = 48/65 (73%)
 Frame = -2

Query: 200 VDEALGLFNKLIQTRPLPCIFPFTQLLGALVKMKHFSVALSMSKRMDAAGIQPDVVTLST 21
           V +A+  FN ++  R  P I  F ++LG+LVKMKHF  A+S+SK+M+  GI+PD+VTLS 
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172

Query: 20  LINCY 6
           LINC+
Sbjct: 173 LINCF 177


>ref|XP_003619848.1| CCP [Medicago truncatula] gi|355494863|gb|AES76066.1| CCP [Medicago
           truncatula]
          Length = 556

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/66 (48%), Positives = 46/66 (69%)
 Frame = -2

Query: 203 GVDEALGLFNKLIQTRPLPCIFPFTQLLGALVKMKHFSVALSMSKRMDAAGIQPDVVTLS 24
           G+D+A+ LFN LI  +PLP +  F  ++G++VKMKH  VA+S+ K+M   G+ P + TLS
Sbjct: 64  GIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLS 123

Query: 23  TLINCY 6
             INCY
Sbjct: 124 IWINCY 129