BLASTX nr result

ID: Coptis25_contig00025800 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025800
         (484 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633299.1| PREDICTED: cellulose synthase-like protein H...   183   1e-44
emb|CBI28832.3| unnamed protein product [Vitis vinifera]              183   1e-44
emb|CAN72832.1| hypothetical protein VITISV_017982 [Vitis vinifera]   183   1e-44
ref|XP_002269976.2| PREDICTED: cellulose synthase-like protein H...   179   3e-43
emb|CBI28833.3| unnamed protein product [Vitis vinifera]              179   3e-43

>ref|XP_003633299.1| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera]
          Length = 764

 Score =  183 bits (464), Expect = 1e-44
 Identities = 89/146 (60%), Positives = 111/146 (76%), Gaps = 3/146 (2%)
 Frame = -1

Query: 484  SGLSVKAWWNNQRMMRITTVTAWLFGVMSLLLKLLGISDTVFEITRKDQGNDP---TDVD 314
            +G S++A WNN RM RIT VTAWLFG +S++LKLLG+S+TVFE+T+KDQ   P   +D D
Sbjct: 610  AGYSIRACWNNLRMWRITAVTAWLFGFLSVILKLLGLSETVFEVTKKDQSTTPGEGSDKD 669

Query: 313  LGRFTFDDSPMFVPGTTLVLLHISALVLSLIGIHSQFEFRSGLGEVICSAVVLLSFLPFL 134
             GRFTFD S +FVP TTL+L+H+ ALV +L+G+    E  S +GE+ICS  V+L F PFL
Sbjct: 670  AGRFTFDGSLIFVPATTLLLVHLMALVTALLGLFDHVEIESRIGEIICSVWVVLCFSPFL 729

Query: 133  KGLFGKGSYGLPTSTICKSVALVGLF 56
            KGLFGKG YG+P STICKS AL  LF
Sbjct: 730  KGLFGKGKYGIPKSTICKSAALAFLF 755


>emb|CBI28832.3| unnamed protein product [Vitis vinifera]
          Length = 751

 Score =  183 bits (464), Expect = 1e-44
 Identities = 89/146 (60%), Positives = 111/146 (76%), Gaps = 3/146 (2%)
 Frame = -1

Query: 484  SGLSVKAWWNNQRMMRITTVTAWLFGVMSLLLKLLGISDTVFEITRKDQGNDP---TDVD 314
            +G S++A WNN RM RIT VTAWLFG +S++LKLLG+S+TVFE+T+KDQ   P   +D D
Sbjct: 597  AGYSIRACWNNLRMWRITAVTAWLFGFLSVILKLLGLSETVFEVTKKDQSTTPGEGSDKD 656

Query: 313  LGRFTFDDSPMFVPGTTLVLLHISALVLSLIGIHSQFEFRSGLGEVICSAVVLLSFLPFL 134
             GRFTFD S +FVP TTL+L+H+ ALV +L+G+    E  S +GE+ICS  V+L F PFL
Sbjct: 657  AGRFTFDGSLIFVPATTLLLVHLMALVTALLGLFDHVEIESRIGEIICSVWVVLCFSPFL 716

Query: 133  KGLFGKGSYGLPTSTICKSVALVGLF 56
            KGLFGKG YG+P STICKS AL  LF
Sbjct: 717  KGLFGKGKYGIPKSTICKSAALAFLF 742


>emb|CAN72832.1| hypothetical protein VITISV_017982 [Vitis vinifera]
          Length = 1332

 Score =  183 bits (464), Expect = 1e-44
 Identities = 89/146 (60%), Positives = 111/146 (76%), Gaps = 3/146 (2%)
 Frame = -1

Query: 484  SGLSVKAWWNNQRMMRITTVTAWLFGVMSLLLKLLGISDTVFEITRKDQGNDP---TDVD 314
            +G S++A WNN RM RIT VTAWLFG +S++LKLLG+S+TVFE+T+KDQ   P   +D D
Sbjct: 1178 AGYSIRACWNNLRMWRITAVTAWLFGFLSVILKLLGLSETVFEVTKKDQSTTPGEGSDKD 1237

Query: 313  LGRFTFDDSPMFVPGTTLVLLHISALVLSLIGIHSQFEFRSGLGEVICSAVVLLSFLPFL 134
             GRFTFD S +FVP TTL+L+H+ ALV +L+G+    E  S +GE+ICS  V+L F PFL
Sbjct: 1238 AGRFTFDGSLIFVPATTLLLVHLMALVTALLGLFDHVEIESRIGEIICSVWVVLCFSPFL 1297

Query: 133  KGLFGKGSYGLPTSTICKSVALVGLF 56
            KGLFGKG YG+P STICKS AL  LF
Sbjct: 1298 KGLFGKGKYGIPKSTICKSAALAFLF 1323


>ref|XP_002269976.2| PREDICTED: cellulose synthase-like protein H1-like [Vitis vinifera]
          Length = 757

 Score =  179 bits (453), Expect = 3e-43
 Identities = 87/147 (59%), Positives = 111/147 (75%), Gaps = 3/147 (2%)
 Frame = -1

Query: 484  SGLSVKAWWNNQRMMRITTVTAWLFGVMSLLLKLLGISDTVFEITRKDQGNDP---TDVD 314
            +G S++A WNN RM RIT VT+WLFG +S++LKLLG+S+TVFE+T+KDQ   P   +D D
Sbjct: 603  AGYSIRACWNNLRMWRITAVTSWLFGFLSVILKLLGLSETVFEVTKKDQSTTPGEGSDKD 662

Query: 313  LGRFTFDDSPMFVPGTTLVLLHISALVLSLIGIHSQFEFRSGLGEVICSAVVLLSFLPFL 134
             GRFTFD S +FVP TTL+L+H+ ALV +L+G+       S +GE+ICS  V+L F PFL
Sbjct: 663  SGRFTFDGSLIFVPATTLLLVHLMALVTALLGLFDLVGIESRIGEIICSVWVVLCFSPFL 722

Query: 133  KGLFGKGSYGLPTSTICKSVALVGLFI 53
            KGLFGKG YG+P STICKS AL  LF+
Sbjct: 723  KGLFGKGKYGIPKSTICKSAALAFLFL 749


>emb|CBI28833.3| unnamed protein product [Vitis vinifera]
          Length = 1566

 Score =  179 bits (453), Expect = 3e-43
 Identities = 86/150 (57%), Positives = 115/150 (76%), Gaps = 4/150 (2%)
 Frame = -1

Query: 481  GLSVKAWWNNQRMMRITTVTAWLFGVMSLLLKLLGISDTVFEITRKDQGN---DPTDVDL 311
            GLS++ WWNNQRM RI T+TAW FG ++++LKLLG+ + VFE+T+K+Q +   D    D 
Sbjct: 1413 GLSIRTWWNNQRMGRIITMTAWFFGFLNVILKLLGLFEAVFEVTQKNQSSASGDDNHKDA 1472

Query: 310  GRFTFDDSPMFVPGTTLVLLHISALVLSLIGI-HSQFEFRSGLGEVICSAVVLLSFLPFL 134
            GRFTF++SP+FVP TTLVL+H+ A+V +L+ + H + E R  +GEVIC+  VLL FLPFL
Sbjct: 1473 GRFTFNESPIFVPATTLVLVHLVAMVKALLNLTHGRHESR--IGEVICNVWVLLCFLPFL 1530

Query: 133  KGLFGKGSYGLPTSTICKSVALVGLFIHYC 44
            KGLF KG YG+P+STICKS AL  +F+H C
Sbjct: 1531 KGLFKKGKYGIPSSTICKSAALAAVFVHLC 1560



 Score =  165 bits (417), Expect = 4e-39
 Identities = 83/147 (56%), Positives = 107/147 (72%), Gaps = 3/147 (2%)
 Frame = -1

Query: 484  SGLSVKAWWNNQRMMRITTVTAWLFGVMSLLLKLLGISDTVFEITRKDQGNDP---TDVD 314
            +G S++A  NN  M RI TVT+WLFG +S++LKLLG+ +TVFE+T+KD    P   +D D
Sbjct: 597  AGFSIRACLNNLMMGRIITVTSWLFGFLSVILKLLGLLETVFEVTKKDLYTTPGEGSDKD 656

Query: 313  LGRFTFDDSPMFVPGTTLVLLHISALVLSLIGIHSQFEFRSGLGEVICSAVVLLSFLPFL 134
             G FTFD S +FVP TTL+L+H+ ALV +L+G+       S +GE+ICS  V+L F PFL
Sbjct: 657  AGGFTFDGSLIFVPATTLLLVHLMALVTALLGLFDHVGIESRIGEIICSVWVVLCFSPFL 716

Query: 133  KGLFGKGSYGLPTSTICKSVALVGLFI 53
            KGLFGKG YG+PTSTICKS AL  LF+
Sbjct: 717  KGLFGKGKYGIPTSTICKSAALALLFL 743


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