BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025789
         (777 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]   204   2e-50
ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containi...   203   3e-50
ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   197   3e-48
emb|CBI36964.3| unnamed protein product [Vitis vinifera]              197   3e-48
ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group] g...   182   5e-44

>emb|CAN71816.1| hypothetical protein VITISV_023421 [Vitis vinifera]
          Length = 494

 Score =  204 bits (518), Expect = 2e-50
 Identities = 99/185 (53%), Positives = 136/185 (73%)
 Frame = -1

Query: 558 KSSELYKRLSVLGGRNDMNVGETLNEWAKEGKSVNKKEIIGFVYQLRKYKKYNHAIQLLE 379
           K + LY +LS L G  + +V ETL++W KEGKSV + ++I  V QLR++KKY HA Q+ E
Sbjct: 27  KEASLYWKLSALRG-TEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIYE 85

Query: 378 WLDKRGQTLSYANQAVHLDLIAKAKGIDSAEKYFTSLPESSKNKLTYGALLNCYCQEKMT 199
           W++K    L+ A++A+ +DL+AK +GI  AE YF SL ES+K   TYGALLNCYC+E M 
Sbjct: 86  WMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENMV 145

Query: 198 KKAMDLLEKMKEQNLASTCLAYNNIISLHMRSGEPEKVPLLVQEMKEKKITTNIYTYAFL 19
            KA++L +K+KE N  S+ L+YNN+ISL++R G+PEKVP LV EM+EK I  ++YTY  L
Sbjct: 146 DKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLL 205

Query: 18  MSSYA 4
           M+SYA
Sbjct: 206 MNSYA 210


>ref|XP_002277733.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02370,
           mitochondrial [Vitis vinifera]
           gi|296089781|emb|CBI39600.3| unnamed protein product
           [Vitis vinifera]
          Length = 498

 Score =  203 bits (517), Expect = 3e-50
 Identities = 99/185 (53%), Positives = 136/185 (73%)
 Frame = -1

Query: 558 KSSELYKRLSVLGGRNDMNVGETLNEWAKEGKSVNKKEIIGFVYQLRKYKKYNHAIQLLE 379
           K + LY +LS L G  + +V ETL++W KEGKSV + ++I  V QLR++KKY HA Q+ E
Sbjct: 31  KEASLYWKLSALRG-TEGDVAETLDKWVKEGKSVKRFDMISCVNQLRRFKKYKHAAQIYE 89

Query: 378 WLDKRGQTLSYANQAVHLDLIAKAKGIDSAEKYFTSLPESSKNKLTYGALLNCYCQEKMT 199
           W++K    L+ A++A+ +DL+AK +GI  AE YF SL ES+K   TYGALLNCYC+E M 
Sbjct: 90  WMEKSKNDLNNADRAIRIDLLAKTEGIAQAENYFNSLQESAKTNKTYGALLNCYCKENML 149

Query: 198 KKAMDLLEKMKEQNLASTCLAYNNIISLHMRSGEPEKVPLLVQEMKEKKITTNIYTYAFL 19
            KA++L +K+KE N  S+ L+YNN+ISL++R G+PEKVP LV EM+EK I  ++YTY  L
Sbjct: 150 DKAVELFKKLKELNFVSSALSYNNMISLYLRVGQPEKVPSLVHEMEEKDIPADLYTYNLL 209

Query: 18  MSSYA 4
           M+SYA
Sbjct: 210 MNSYA 214


>ref|XP_003632411.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02370, mitochondrial-like [Vitis vinifera]
          Length = 506

 Score =  197 bits (500), Expect = 3e-48
 Identities = 96/185 (51%), Positives = 132/185 (71%)
 Frame = -1

Query: 558 KSSELYKRLSVLGGRNDMNVGETLNEWAKEGKSVNKKEIIGFVYQLRKYKKYNHAIQLLE 379
           +   LY RLS LG     +V +TLNE  KEGK + K E+   + QLRKY+++ HA+++++
Sbjct: 42  RQPRLYHRLSALGATGG-SVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMD 100

Query: 378 WLDKRGQTLSYANQAVHLDLIAKAKGIDSAEKYFTSLPESSKNKLTYGALLNCYCQEKMT 199
           W++ R    SYA+ AV LDL++K KG+ +AE+YF +L  S+KN LTYG LLNCYC+EKM 
Sbjct: 101 WMENRKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKME 160

Query: 198 KKAMDLLEKMKEQNLASTCLAYNNIISLHMRSGEPEKVPLLVQEMKEKKITTNIYTYAFL 19
           +KA+ L EKM E N AST L +NN++SLHMR G+PE VP LV EMK++ I+ + +TY  L
Sbjct: 161 EKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNIL 220

Query: 18  MSSYA 4
           M SYA
Sbjct: 221 MQSYA 225


>emb|CBI36964.3| unnamed protein product [Vitis vinifera]
          Length = 526

 Score =  197 bits (500), Expect = 3e-48
 Identities = 96/185 (51%), Positives = 132/185 (71%)
 Frame = -1

Query: 558 KSSELYKRLSVLGGRNDMNVGETLNEWAKEGKSVNKKEIIGFVYQLRKYKKYNHAIQLLE 379
           +   LY RLS LG     +V +TLNE  KEGK + K E+   + QLRKY+++ HA+++++
Sbjct: 81  RQPRLYHRLSALGATGG-SVADTLNEHIKEGKLIAKHELSSCIKQLRKYRQFQHALEIMD 139

Query: 378 WLDKRGQTLSYANQAVHLDLIAKAKGIDSAEKYFTSLPESSKNKLTYGALLNCYCQEKMT 199
           W++ R    SYA+ AV LDL++K KG+ +AE+YF +L  S+KN LTYG LLNCYC+EKM 
Sbjct: 140 WMENRKIFFSYADYAVRLDLLSKTKGLATAEEYFNNLSPSAKNLLTYGTLLNCYCKEKME 199

Query: 198 KKAMDLLEKMKEQNLASTCLAYNNIISLHMRSGEPEKVPLLVQEMKEKKITTNIYTYAFL 19
           +KA+ L EKM E N AST L +NN++SLHMR G+PE VP LV EMK++ I+ + +TY  L
Sbjct: 200 EKALALFEKMDELNFASTSLTFNNLMSLHMRLGKPEMVPPLVDEMKKRSISPDTFTYNIL 259

Query: 18  MSSYA 4
           M SYA
Sbjct: 260 MQSYA 264


>ref|NP_001042820.1| Os01g0301000 [Oryza sativa Japonica Group]
           gi|57899052|dbj|BAD87826.1| putative DNA-binding protein
           [Oryza sativa Japonica Group]
           gi|113532351|dbj|BAF04734.1| Os01g0301000 [Oryza sativa
           Japonica Group] gi|215694668|dbj|BAG89859.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215706899|dbj|BAG93359.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 522

 Score =  182 bits (463), Expect = 5e-44
 Identities = 86/189 (45%), Positives = 126/189 (66%), Gaps = 1/189 (0%)
 Frame = -1

Query: 567 EEKKSSELYKRLSVLGGRNDMNVGETLNEWAKEGKSVNKKEIIGFVYQLRKYKKYNHAIQ 388
           EEK +  LY+RLS LGG  + +V   +N+W +EG+     ++  +V +LRKYK++ HA++
Sbjct: 50  EEKDARSLYRRLSALGGAGEGSVSRVMNKWVREGREARAADLAKYVKELRKYKRHAHALE 109

Query: 387 LLEWL-DKRGQTLSYANQAVHLDLIAKAKGIDSAEKYFTSLPESSKNKLTYGALLNCYCQ 211
           L+EW+ + +G  +SY N A+ LDLI K +GI++AE+YF  LP+  KN  TYGALLNCYC 
Sbjct: 110 LMEWMVNTKGMNMSYTNHAIRLDLIYKVRGIEAAEQYFAGLPDPGKNHKTYGALLNCYCS 169

Query: 210 EKMTKKAMDLLEKMKEQNLASTCLAYNNIISLHMRSGEPEKVPLLVQEMKEKKITTNIYT 31
            KM  KA D+  KM E  ++S+ L  NN++SL+++ G+  KV  L +EMK K +  +  T
Sbjct: 170 AKMEDKATDIYRKMDELGISSSTLPINNLMSLYVKIGQHRKVTSLFEEMKVKNVKPDNLT 229

Query: 30  YAFLMSSYA 4
              LMSSYA
Sbjct: 230 CCLLMSSYA 238