BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025788
         (393 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinu...   173   1e-41
ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein lig...   172   2e-41
emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]   172   2e-41
ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein lig...   167   6e-40
gb|ACU23737.1| unknown [Glycine max]                                  167   6e-40

>ref|XP_002528573.1| Ran GTPase binding protein, putative [Ricinus communis]
           gi|223532017|gb|EEF33828.1| Ran GTPase binding protein,
           putative [Ricinus communis]
          Length = 497

 Score =  173 bits (439), Expect = 1e-41
 Identities = 88/138 (63%), Positives = 105/138 (76%), Gaps = 11/138 (7%)
 Frame = -3

Query: 391 SAHLTATDLVSLEQTCQTI-----------RSIIEYVAFHLCASHTIYVSLNVNAKTELL 245
           +  L+ATDLV LE T +T            +S++++ AF LCASH++Y  +  NA+ ELL
Sbjct: 24  TGRLSATDLVCLELTSKTFGGSHGLYPHKFKSLVDFAAFQLCASHSVYTGMLWNAQKELL 83

Query: 244 DRCSGNWKRVLRFLQGVEQASSLVVTSSGNEMQITTGRYHTLLISDSSVYSCGSSLCGVL 65
           DRC GNWKRVLRFL  VE++S +V TS+GN MQITTGRYHTLLIS+SSVYSCGSSLCGVL
Sbjct: 84  DRCGGNWKRVLRFLLAVEESSGMVETSAGN-MQITTGRYHTLLISNSSVYSCGSSLCGVL 142

Query: 64  GHGSETKQCVSFSRINFP 11
           GHG ET QCVSFSRI FP
Sbjct: 143 GHGPETTQCVSFSRITFP 160


>ref|XP_002284809.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2 [Vitis
           vinifera] gi|302143037|emb|CBI20332.3| unnamed protein
           product [Vitis vinifera]
          Length = 492

 Score =  172 bits (437), Expect = 2e-41
 Identities = 88/138 (63%), Positives = 103/138 (74%), Gaps = 11/138 (7%)
 Frame = -3

Query: 391 SAHLTATDLVSLEQTCQTI-----------RSIIEYVAFHLCASHTIYVSLNVNAKTELL 245
           S  L+A DLV LE T +T            RS++++ AF LC SH IY +L++NA+ +L 
Sbjct: 24  SGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFAAFQLCGSHPIYAALSLNAQKDLF 83

Query: 244 DRCSGNWKRVLRFLQGVEQASSLVVTSSGNEMQITTGRYHTLLISDSSVYSCGSSLCGVL 65
           DRC  NWKRVLRFLQ VEQ+S +  TS+GN MQITTGRYHTLLI DSSVYSCGSSLCGVL
Sbjct: 84  DRCGENWKRVLRFLQSVEQSSYISETSAGN-MQITTGRYHTLLIKDSSVYSCGSSLCGVL 142

Query: 64  GHGSETKQCVSFSRINFP 11
           GHG ET QCV+FSRINFP
Sbjct: 143 GHGPETTQCVAFSRINFP 160


>emb|CAN60415.1| hypothetical protein VITISV_023540 [Vitis vinifera]
          Length = 511

 Score =  172 bits (437), Expect = 2e-41
 Identities = 88/138 (63%), Positives = 103/138 (74%), Gaps = 11/138 (7%)
 Frame = -3

Query: 391 SAHLTATDLVSLEQTCQTI-----------RSIIEYVAFHLCASHTIYVSLNVNAKTELL 245
           S  L+A DLV LE T +T            RS++++ AF LC SH IY +L++NA+ +L 
Sbjct: 24  SGRLSAVDLVCLELTSRTFGASHGLYPHKFRSLVDFAAFQLCGSHPIYAALSLNAQKDLF 83

Query: 244 DRCSGNWKRVLRFLQGVEQASSLVVTSSGNEMQITTGRYHTLLISDSSVYSCGSSLCGVL 65
           DRC  NWKRVLRFLQ VEQ+S +  TS+GN MQITTGRYHTLLI DSSVYSCGSSLCGVL
Sbjct: 84  DRCGENWKRVLRFLQSVEQSSYISETSAGN-MQITTGRYHTLLIKDSSVYSCGSSLCGVL 142

Query: 64  GHGSETKQCVSFSRINFP 11
           GHG ET QCV+FSRINFP
Sbjct: 143 GHGPETTQCVAFSRINFP 160


>ref|XP_003543252.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 485

 Score =  167 bits (424), Expect = 6e-40
 Identities = 85/138 (61%), Positives = 102/138 (73%), Gaps = 11/138 (7%)
 Frame = -3

Query: 391 SAHLTATDLVSLEQTCQTI-----------RSIIEYVAFHLCASHTIYVSLNVNAKTELL 245
           S  L+A DLV LE T +T            +S++ + AF LCASH  Y  + +N++ EL 
Sbjct: 24  SGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFAAFQLCASHVTYARMGLNSQRELY 83

Query: 244 DRCSGNWKRVLRFLQGVEQASSLVVTSSGNEMQITTGRYHTLLISDSSVYSCGSSLCGVL 65
           DRC GNWKRVLRFLQ VEQ+S +V TSSGN MQITTG+YHTLLIS+SSVYSCGS LCGVL
Sbjct: 84  DRCGGNWKRVLRFLQSVEQSSQMVETSSGN-MQITTGKYHTLLISNSSVYSCGSGLCGVL 142

Query: 64  GHGSETKQCVSFSRINFP 11
           G GSET QCV+F+RI+FP
Sbjct: 143 GQGSETTQCVAFTRIDFP 160


>gb|ACU23737.1| unknown [Glycine max]
          Length = 485

 Score =  167 bits (424), Expect = 6e-40
 Identities = 85/138 (61%), Positives = 102/138 (73%), Gaps = 11/138 (7%)
 Frame = -3

Query: 391 SAHLTATDLVSLEQTCQTI-----------RSIIEYVAFHLCASHTIYVSLNVNAKTELL 245
           S  L+A DLV LE T +T            +S++ + AF LCASH  Y  + +N++ EL 
Sbjct: 24  SGRLSAMDLVCLELTSKTFGGSHGLHPFKFKSLVAFAAFQLCASHVTYARMGLNSQRELY 83

Query: 244 DRCSGNWKRVLRFLQGVEQASSLVVTSSGNEMQITTGRYHTLLISDSSVYSCGSSLCGVL 65
           DRC GNWKRVLRFLQ VEQ+S +V TSSGN MQITTG+YHTLLIS+SSVYSCGS LCGVL
Sbjct: 84  DRCGGNWKRVLRFLQSVEQSSQMVETSSGN-MQITTGKYHTLLISNSSVYSCGSGLCGVL 142

Query: 64  GHGSETKQCVSFSRINFP 11
           G GSET QCV+F+RI+FP
Sbjct: 143 GQGSETTQCVAFTRIDFP 160