BLASTX nr result
ID: Coptis25_contig00025783
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025783 (1803 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI30150.3| unnamed protein product [Vitis vinifera] 414 e-113 ref|XP_002529591.1| conserved hypothetical protein [Ricinus comm... 401 e-109 ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3... 400 e-109 ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|2... 379 e-102 ref|XP_002316395.1| predicted protein [Populus trichocarpa] gi|2... 377 e-102 >emb|CBI30150.3| unnamed protein product [Vitis vinifera] Length = 610 Score = 414 bits (1065), Expect = e-113 Identities = 208/367 (56%), Positives = 272/367 (74%), Gaps = 1/367 (0%) Frame = +3 Query: 63 GHTLGSRYGAQGSNCCRFALEDELVLEGAKIMDIDASNQILILARCLPGMGGNHVLTKIS 242 GH +G +GS+C F L+ EL ++GA+ DIDAS +IL++AR L G GG HVLTK+S Sbjct: 247 GHNFAENFGRRGSSC-NFVLQKELQVDGARYFDIDASGEILVIARRLSGTGGTHVLTKMS 305 Query: 243 LMYPYDSENIQLPVTTKNVKDLHVSPYGSKLALFASLGKKLSVLSMESNNIVVTYDLPGS 422 L+ P++ E+I LP TK VKDL VSP +LAL ASLGKKLSVLSMESNN+++TYDLP + Sbjct: 306 LISPHEIEDILLPSGTKAVKDLRVSPAKCRLALLASLGKKLSVLSMESNNVILTYDLPTA 365 Query: 423 AWSCSWDLNSPHYLYAGLQNGMLLVFDMRHAANPLESLTGLKPKPVHTINSILHKSPSPS 602 AWSCSWDLNS HY+YAGLQNGML+VFDMR A P+ ++G P+HTI S+LH S PS Sbjct: 366 AWSCSWDLNSSHYMYAGLQNGMLMVFDMRQTARPMAEISGPTSNPIHTIQSVLHNSTLPS 425 Query: 603 DVRTLLTASAIGPCVWNTGAAGERPFLIPKLENQGVCISVACCPSSDDIVASFRP-VQTS 779 V TLL+AS++G C WN G + ERPFL+P+ +N GVCIS+A CPSSD+IV++FRP V+ S Sbjct: 426 GVSTLLSASSVGLCQWNFGGSEERPFLVPETKNHGVCISLAHCPSSDNIVSTFRPKVEMS 485 Query: 780 NDIISSQSPLTPSPTVGGRGIQGSHVLIKRLVGNCYQNVACTSANVNDVRLLKSAVVNVE 959 N+I SQ LTPS V G+G+QGSHVL+KR+ GNCYQ + + ANVND+RL +SA+++++ Sbjct: 486 NEIAVSQYSLTPS--VMGQGMQGSHVLLKRVGGNCYQKLGSSCANVNDIRLQRSAIIDLQ 543 Query: 960 NCNPLFAYGDESTQGLSVYALPSLGILQNLKPHHNPILDVKFAPTPGSGILGCISKDRLQ 1139 + +PLF GDE T L + LPSL + Q LK +P+ DVK++ +L C+S+D LQ Sbjct: 544 SHHPLFVSGDEITHELVLQELPSLRVSQRLKSQKHPLRDVKYSHDLSPSLLCCLSEDTLQ 603 Query: 1140 VFSAKVS 1160 FSAK S Sbjct: 604 FFSAKFS 610 >ref|XP_002529591.1| conserved hypothetical protein [Ricinus communis] gi|223530924|gb|EEF32783.1| conserved hypothetical protein [Ricinus communis] Length = 515 Score = 401 bits (1030), Expect = e-109 Identities = 198/345 (57%), Positives = 260/345 (75%) Frame = +3 Query: 123 EDELVLEGAKIMDIDASNQILILARCLPGMGGNHVLTKISLMYPYDSENIQLPVTTKNVK 302 + EL +EGA++ ID + Q LILAR + GMGG H+L KI+L+ P+++E+IQLP +TK VK Sbjct: 174 QHELAVEGARLFAIDITYQNLILARRISGMGGIHMLNKINLINPHENEDIQLPTSTKTVK 233 Query: 303 DLHVSPYGSKLALFASLGKKLSVLSMESNNIVVTYDLPGSAWSCSWDLNSPHYLYAGLQN 482 DL +SP G +L L ASLGKKLS+LSMESN+IV TY+L AWSCSWDLNSPHY+YAGLQN Sbjct: 234 DLQISPCG-RLTLLASLGKKLSILSMESNSIVTTYNLRVPAWSCSWDLNSPHYMYAGLQN 292 Query: 483 GMLLVFDMRHAANPLESLTGLKPKPVHTINSILHKSPSPSDVRTLLTASAIGPCVWNTGA 662 GM+LVFDMRH NPL+S+ GL P+P+HTI+S++H + + LLTAS++GPCVW+ + Sbjct: 293 GMILVFDMRHTVNPLQSMIGLTPRPIHTIHSLVHNPALGQNAQKLLTASSLGPCVWDV-S 351 Query: 663 AGERPFLIPKLENQGVCISVACCPSSDDIVASFRPVQTSNDIISSQSPLTPSPTVGGRGI 842 AGERPFL+P L+NQG+C S+A PSSDDIVAS+RP + ++ S TV G+GI Sbjct: 352 AGERPFLVPGLDNQGICTSLAYGPSSDDIVASYRPKFFPSS--ETERSYQESSTVPGQGI 409 Query: 843 QGSHVLIKRLVGNCYQNVACTSANVNDVRLLKSAVVNVENCNPLFAYGDESTQGLSVYAL 1022 G+ VL+KR+ G Y N+ T A +ND + SA++N+ENC PL AY D T GL + L Sbjct: 410 LGTQVLVKRVAGGFYHNLGSTPAYLNDAHMENSAIINMENCFPLLAYADGVTHGLRLREL 469 Query: 1023 PSLGILQNLKPHHNPILDVKFAPTPGSGILGCISKDRLQVFSAKV 1157 PSL + QNLKPHH+PILDVK A T G+G+LGC+S+D+LQ+FS K+ Sbjct: 470 PSLTVSQNLKPHHHPILDVKCAHTRGTGVLGCVSEDKLQLFSLKI 514 >ref|XP_002266033.1| PREDICTED: E3 ubiquitin-protein ligase RFWD3-like [Vitis vinifera] Length = 567 Score = 400 bits (1029), Expect = e-109 Identities = 201/348 (57%), Positives = 262/348 (75%), Gaps = 1/348 (0%) Frame = +3 Query: 120 LEDELVLEGAKIMDIDASNQILILARCLPGMGGNHVLTKISLMYPYDSENIQLPVTTKNV 299 +E EL ++GA+ DIDAS +IL++AR L G GG HVLTK+SL+ P++ E+I LP TK V Sbjct: 222 IEKELQVDGARYFDIDASGEILVIARRLSGTGGTHVLTKMSLISPHEIEDILLPSGTKAV 281 Query: 300 KDLHVSPYGSKLALFASLGKKLSVLSMESNNIVVTYDLPGSAWSCSWDLNSPHYLYAGLQ 479 KDL VSP +LAL ASLGKKLSVLSMESNN+++TYDLP +AWSCSWDLNS HY+YAGLQ Sbjct: 282 KDLRVSPAKCRLALLASLGKKLSVLSMESNNVILTYDLPTAAWSCSWDLNSSHYMYAGLQ 341 Query: 480 NGMLLVFDMRHAANPLESLTGLKPKPVHTINSILHKSPSPSDVRTLLTASAIGPCVWNTG 659 NGML+VFDMR A P+ ++G P+HTI S+LH S PS V TLL+AS++G C WN G Sbjct: 342 NGMLMVFDMRQTARPMAEISGPTSNPIHTIQSVLHNSTLPSGVSTLLSASSVGLCQWNFG 401 Query: 660 AAGERPFLIPKLENQGVCISVACCPSSDDIVASFRP-VQTSNDIISSQSPLTPSPTVGGR 836 + ERPFL+P+ +N GVCIS+A CPSSD+IV++FRP V+ SN+I SQ LTPS V G+ Sbjct: 402 GSEERPFLVPETKNHGVCISLAHCPSSDNIVSTFRPKVEMSNEIAVSQYSLTPS--VMGQ 459 Query: 837 GIQGSHVLIKRLVGNCYQNVACTSANVNDVRLLKSAVVNVENCNPLFAYGDESTQGLSVY 1016 G+QGSHVL+KR+ GNCYQ + + ANVND+RL +SA++++++ +PLF GDE T L + Sbjct: 460 GMQGSHVLLKRVGGNCYQKLGSSCANVNDIRLQRSAIIDLQSHHPLFVSGDEITHELVLQ 519 Query: 1017 ALPSLGILQNLKPHHNPILDVKFAPTPGSGILGCISKDRLQVFSAKVS 1160 LPSL + Q LK +P+ DVK++ +L C+S+D LQ FSAK S Sbjct: 520 ELPSLRVSQRLKSQKHPLRDVKYSHDLSPSLLCCLSEDTLQFFSAKFS 567 >ref|XP_002326378.1| predicted protein [Populus trichocarpa] gi|222833571|gb|EEE72048.1| predicted protein [Populus trichocarpa] Length = 681 Score = 379 bits (974), Expect = e-102 Identities = 193/367 (52%), Positives = 266/367 (72%), Gaps = 1/367 (0%) Frame = +3 Query: 63 GHTLGSRYGAQGSNCCRFALEDELVLEGAKIMDIDASNQILILARCLPGMGGNHVLTKIS 242 G+++ S + QGS+ C F L+ EL ++GA++ D+DAS +IL+L R +P MGG+HVLTK+S Sbjct: 319 GNSIYSDFNRQGSSSC-FMLQRELRVDGARLFDVDASGKILLLVRRVPMMGGSHVLTKMS 377 Query: 243 LMYPYDSENIQLPVTTKNVKDLHVSPYGSKLALFASLGKKLSVLSMESNNIVVTYDLPGS 422 L+ P++SE+I LP TK +KDLH+SP LALFASLGKKLSVLSMESNN++++YDLP + Sbjct: 378 LIPPHESEDIFLPPATKIIKDLHISPTNGSLALFASLGKKLSVLSMESNNVILSYDLPAA 437 Query: 423 AWSCSWDLNSPHYLYAGLQNGMLLVFDMRHAANPLESLTGLKPKPVHTINSILHKSPSPS 602 AWSCSWDLN HY+YAGLQNG LLVFDMR +P+ES G P+HT+ S+ H S PS Sbjct: 438 AWSCSWDLNCSHYVYAGLQNGSLLVFDMRITGSPVESRLGHTTDPIHTVQSLQHISTLPS 497 Query: 603 DVRTLLTASAIGPCVWNTGAAGERPFLIPKLENQGVCISVACCPSSDDIVASFRP-VQTS 779 V+T+++AS++G C WN G ERPFLIP+ NQGVC+S+A C SSDDIV S+RP V+ S Sbjct: 498 GVKTVVSASSVGMCQWNFGGEEERPFLIPETTNQGVCVSLAYCASSDDIVVSYRPRVEMS 557 Query: 780 NDIISSQSPLTPSPTVGGRGIQGSHVLIKRLVGNCYQNVACTSANVNDVRLLKSAVVNVE 959 N+++ SQ+ PS G+G+ GSH+ +KR G+ Y+ + + V+ +RL KS++++ + Sbjct: 558 NEVV-SQTLFKPS-LATGQGVLGSHLHLKR-AGSNYEKLGIACSTVSGIRLPKSSIIDRQ 614 Query: 960 NCNPLFAYGDESTQGLSVYALPSLGILQNLKPHHNPILDVKFAPTPGSGILGCISKDRLQ 1139 N PLFA GDE + GL + LPS Q LK H + I DVK+ T G+LGC+S+D +Q Sbjct: 615 NQKPLFATGDEVSCGLILQELPSFTATQRLKSHQHFIYDVKYTSTHSQGLLGCLSEDTVQ 674 Query: 1140 VFSAKVS 1160 +FS K+S Sbjct: 675 LFSTKLS 681 >ref|XP_002316395.1| predicted protein [Populus trichocarpa] gi|222865435|gb|EEF02566.1| predicted protein [Populus trichocarpa] Length = 605 Score = 377 bits (969), Expect = e-102 Identities = 196/367 (53%), Positives = 265/367 (72%), Gaps = 1/367 (0%) Frame = +3 Query: 60 SGHTLGSRYGAQGSNCCRFALEDELVLEGAKIMDIDASNQILILARCLPGMGGNHVLTKI 239 SG + GS Y ++ C F L+ EL +EG ++ +D S Q LIL R + GMGG H+L KI Sbjct: 238 SGCSFGS-YSSKQLLHCNFKLQHELAIEGGRLFAMDFSYQNLILTRRIAGMGGMHMLNKI 296 Query: 240 SLMYPYDSENIQLPVTTKNVKDLHVSPYGSKLALFASLGKKLSVLSMESNNIVVTYDLPG 419 +L+ P ++E+IQLP +TK VKD+ +SP G KL L ASLGKKLS+LSMESNNIVVTY+L Sbjct: 297 NLINPRENEDIQLPPSTKAVKDIQISPCG-KLTLLASLGKKLSILSMESNNIVVTYNLRV 355 Query: 420 SAWSCSWDLNSPHYLYAGLQNGMLLVFDMRHAANPLESLTGLKPKPVHTINSILHKSPSP 599 AWSCSWDLNSPHY+YAGLQNGMLLVFDMR NPL+S+ G P+HT++ + Sbjct: 356 PAWSCSWDLNSPHYVYAGLQNGMLLVFDMRGTLNPLQSMVGPVLGPIHTMHPLAQNPVLG 415 Query: 600 SDVRTLLTASAIGPCVWNTGAAGERPFLIPKLENQGVCISVACCPSSDDIVASFRP-VQT 776 S+ + LLTAS++GPCVWNT AG+RPFL+P ENQG+C S+A P SDDIVAS+ P + Sbjct: 416 SNSQKLLTASSLGPCVWNTD-AGKRPFLVPGFENQGICTSLAYGPLSDDIVASYHPKSKK 474 Query: 777 SNDIISSQSPLTPSPTVGGRGIQGSHVLIKRLVGNCYQNVACTSANVNDVRLLKSAVVNV 956 SN ++SQ S G S +L+KR+ + Y+N+ TSA +++ ++ ++A++N+ Sbjct: 475 SNATVNSQCIDPDSSPFPGSATLCSQLLVKRIADSHYRNLGSTSAYLSNGQMARTAIINM 534 Query: 957 ENCNPLFAYGDESTQGLSVYALPSLGILQNLKPHHNPILDVKFAPTPGSGILGCISKDRL 1136 +NC PLFAYGDE+T+GL + LPS + QNLKPHH+PILDVK+A +GILG +S+D+L Sbjct: 535 QNCFPLFAYGDEATRGLRLKELPSFNVTQNLKPHHHPILDVKYAHNQDTGILGSVSEDKL 594 Query: 1137 QVFSAKV 1157 Q+FSA++ Sbjct: 595 QLFSAEL 601