BLASTX nr result

ID: Coptis25_contig00025780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025780
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802...   175   3e-42
ref|XP_002518800.1| conserved hypothetical protein [Ricinus comm...   168   5e-40
emb|CBI27489.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243...   159   2e-37

>ref|XP_003524133.1| PREDICTED: uncharacterized protein LOC100802419 [Glycine max]
          Length = 2812

 Score =  175 bits (444), Expect = 3e-42
 Identities = 83/120 (69%), Positives = 101/120 (84%)
 Frame = +2

Query: 2    DSILFKSARWKVLFSDNFRKSFGNLKSSQLQKSVINLLLKLSSGWRPKRKSVDSVCQNSS 181
            DS LFK +RWKVLFSDNF KSF  L+S Q +K V++LLLKLS+GWRPKR  VD +C NSS
Sbjct: 879  DSFLFKKSRWKVLFSDNFLKSFKKLRSKQTKKLVLDLLLKLSTGWRPKRMKVDLLCGNSS 938

Query: 182  QLVKQFKVEHLYVITTIDIVKHSMYTQVLKIWDILPLAEIQKLIKRLNNIFGMYTDDFIS 361
            Q++KQFKVE L+V+ + DIVK SMYTQVLKIWDI+PL ++ KL+KRL+NIFG YTD+FIS
Sbjct: 939  QILKQFKVESLFVVCSTDIVKESMYTQVLKIWDIMPLEDVPKLVKRLDNIFGSYTDEFIS 998


>ref|XP_002518800.1| conserved hypothetical protein [Ricinus communis]
            gi|223542181|gb|EEF43725.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 2820

 Score =  168 bits (425), Expect = 5e-40
 Identities = 82/120 (68%), Positives = 100/120 (83%)
 Frame = +2

Query: 2    DSILFKSARWKVLFSDNFRKSFGNLKSSQLQKSVINLLLKLSSGWRPKRKSVDSVCQNSS 181
            DS  FKSARWKVLFS+NFRKSFG L S + + S +NLLLKLSSGWRPK K+VDS+C +S 
Sbjct: 891  DSAFFKSARWKVLFSENFRKSFGKLSSVRKKTSALNLLLKLSSGWRPKTKNVDSIC-HSY 949

Query: 182  QLVKQFKVEHLYVITTIDIVKHSMYTQVLKIWDILPLAEIQKLIKRLNNIFGMYTDDFIS 361
            +L+KQ+KVE LY+I +IDIVK  MYTQVLK+WDILPL +I +L KRL+ IFG YTDDF++
Sbjct: 950  RLLKQYKVEGLYIICSIDIVKERMYTQVLKVWDILPLEDIPRLAKRLDGIFGSYTDDFMN 1009


>emb|CBI27489.3| unnamed protein product [Vitis vinifera]
          Length = 2562

 Score =  164 bits (414), Expect = 9e-39
 Identities = 81/119 (68%), Positives = 99/119 (83%)
 Frame = +2

Query: 5    SILFKSARWKVLFSDNFRKSFGNLKSSQLQKSVINLLLKLSSGWRPKRKSVDSVCQNSSQ 184
            SILFKSA WKVLFSDNF+KSF  L+S   +KSV+NLLLKLSSGWRPKR +VD VC++SS 
Sbjct: 833  SILFKSAMWKVLFSDNFKKSFVKLRSDHTKKSVLNLLLKLSSGWRPKRLNVDRVCESSSH 892

Query: 185  LVKQFKVEHLYVITTIDIVKHSMYTQVLKIWDILPLAEIQKLIKRLNNIFGMYTDDFIS 361
            ++KQFKVE LY++ +IDIVK+   TQVL++WDILPL  + KL KRL+NIF  YTDDFI+
Sbjct: 893  ILKQFKVEGLYIVCSIDIVKN---TQVLRVWDILPLEGVPKLAKRLDNIFQRYTDDFIN 948


>ref|XP_002311566.1| predicted protein [Populus trichocarpa] gi|222851386|gb|EEE88933.1|
            predicted protein [Populus trichocarpa]
          Length = 1950

 Score =  161 bits (407), Expect = 6e-38
 Identities = 80/120 (66%), Positives = 96/120 (80%)
 Frame = +2

Query: 2    DSILFKSARWKVLFSDNFRKSFGNLKSSQLQKSVINLLLKLSSGWRPKRKSVDSVCQNSS 181
            DS LF+SARWKVLFS+ F+KSFG L S + +  V+NLLLKLSSGWRPK++SVD +C +SS
Sbjct: 718  DSALFRSARWKVLFSEYFKKSFGKLASVRKKTPVLNLLLKLSSGWRPKKRSVDFICGSSS 777

Query: 182  QLVKQFKVEHLYVITTIDIVKHSMYTQVLKIWDILPLAEIQKLIKRLNNIFGMYTDDFIS 361
            Q++KQFKVE LYVI +IDIVK   YTQVLK+WD+L L +I  L KRL  IF  YTDDFIS
Sbjct: 778  QILKQFKVEGLYVICSIDIVKEICYTQVLKVWDLLALEDIPILAKRLEGIFETYTDDFIS 837


>ref|XP_002263192.2| PREDICTED: uncharacterized protein LOC100243095 [Vitis vinifera]
          Length = 2788

 Score =  159 bits (403), Expect = 2e-37
 Identities = 78/119 (65%), Positives = 99/119 (83%)
 Frame = +2

Query: 5    SILFKSARWKVLFSDNFRKSFGNLKSSQLQKSVINLLLKLSSGWRPKRKSVDSVCQNSSQ 184
            SILFK+ARWKVLFS+NFRKSF  L+S + +KSV+ LLL LSSGWRPKR ++D VC +SSQ
Sbjct: 891  SILFKNARWKVLFSNNFRKSFVKLRSDRTKKSVMKLLLNLSSGWRPKRLNIDRVCGSSSQ 950

Query: 185  LVKQFKVEHLYVITTIDIVKHSMYTQVLKIWDILPLAEIQKLIKRLNNIFGMYTDDFIS 361
            ++KQFKVE  Y++ +IDIVK+   TQVL++WDILPL +I KL+K L+NIF  YTDDFI+
Sbjct: 951  ILKQFKVEGFYIVCSIDIVKN---TQVLRVWDILPLEDILKLVKHLDNIFQRYTDDFIN 1006


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