BLASTX nr result

ID: Coptis25_contig00025766 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025766
         (587 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27754.3| unnamed protein product [Vitis vinifera]              169   2e-40
ref|XP_002275046.1| PREDICTED: uncharacterized protein LOC100254...   169   2e-40
ref|XP_002516209.1| microtubule motor, putative [Ricinus communi...   165   6e-39
ref|XP_002326146.1| predicted protein [Populus trichocarpa] gi|2...   164   1e-38
ref|XP_002321490.1| predicted protein [Populus trichocarpa] gi|2...   160   2e-37

>emb|CBI27754.3| unnamed protein product [Vitis vinifera]
          Length = 942

 Score =  169 bits (429), Expect = 2e-40
 Identities = 99/195 (50%), Positives = 120/195 (61%), Gaps = 1/195 (0%)
 Frame = -2

Query: 586  LEIVQQSIDKLMMALPDTVETSESKDQLGNNSVLPSPLRNSTNRSHIIRYPCSPMSSSSD 407
            LE VQ+SIDKL+ + P T +T E K Q     V P  L N+    ++IR PCSPMSS   
Sbjct: 574  LENVQKSIDKLVFSFPSTEKTPEPKAQSKKKKVHPFALSNNGTMPNLIRSPCSPMSSRK- 632

Query: 406  VMDLEQENKPPQNEGFVSGHDAPLQSC-RATPIKNGHGHNISSREGTPGSSRVKSVNVKK 230
            VM+ E EN+ P++   VSG    L    +AT  ++    N  SREGTP S R  SVNVKK
Sbjct: 633  VMECEVENRAPEHNNIVSGGGDALPGLYKATSPRSDQSGNCISREGTPVSQRSNSVNVKK 692

Query: 229  MQEMFKNAAEQNIRSIRAYVTELKERVAKLQYQKXXXXXXXXXXXXXXXXXXXXEVQDKT 50
            MQ MFKNAAE+NI+SIRAYVTELKERVAKLQYQK                    ++ D +
Sbjct: 693  MQRMFKNAAEENIQSIRAYVTELKERVAKLQYQKQLLVCQVLELETNEPATEETDMIDHS 752

Query: 49   PISWHLVFEEQRKQI 5
            P+SWHL+FE QRKQI
Sbjct: 753  PVSWHLMFESQRKQI 767


>ref|XP_002275046.1| PREDICTED: uncharacterized protein LOC100254378 [Vitis vinifera]
          Length = 943

 Score =  169 bits (429), Expect = 2e-40
 Identities = 99/195 (50%), Positives = 120/195 (61%), Gaps = 1/195 (0%)
 Frame = -2

Query: 586  LEIVQQSIDKLMMALPDTVETSESKDQLGNNSVLPSPLRNSTNRSHIIRYPCSPMSSSSD 407
            LE VQ+SIDKL+ + P T +T E K Q     V P  L N+    ++IR PCSPMSS   
Sbjct: 575  LENVQKSIDKLVFSFPSTEKTPEPKAQSKKKKVHPFALSNNGTMPNLIRSPCSPMSSRK- 633

Query: 406  VMDLEQENKPPQNEGFVSGHDAPLQSC-RATPIKNGHGHNISSREGTPGSSRVKSVNVKK 230
            VM+ E EN+ P++   VSG    L    +AT  ++    N  SREGTP S R  SVNVKK
Sbjct: 634  VMECEVENRAPEHNNIVSGGGDALPGLYKATSPRSDQSGNCISREGTPVSQRSNSVNVKK 693

Query: 229  MQEMFKNAAEQNIRSIRAYVTELKERVAKLQYQKXXXXXXXXXXXXXXXXXXXXEVQDKT 50
            MQ MFKNAAE+NI+SIRAYVTELKERVAKLQYQK                    ++ D +
Sbjct: 694  MQRMFKNAAEENIQSIRAYVTELKERVAKLQYQKQLLVCQVLELETNEPATEETDMIDHS 753

Query: 49   PISWHLVFEEQRKQI 5
            P+SWHL+FE QRKQI
Sbjct: 754  PVSWHLMFESQRKQI 768


>ref|XP_002516209.1| microtubule motor, putative [Ricinus communis]
            gi|223544695|gb|EEF46211.1| microtubule motor, putative
            [Ricinus communis]
          Length = 891

 Score =  165 bits (417), Expect = 6e-39
 Identities = 93/195 (47%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
 Frame = -2

Query: 586  LEIVQQSIDKLMMALPDTVETSESKDQLGNNSVLPSPLRNSTNRSHIIRYPCSPMSSSSD 407
            L+ VQ+SI+ L+ +     ET E K  L      P  L NS+N  +IIRYPCSP+SSS  
Sbjct: 578  LDNVQKSIEMLVSSYACNEETPEFKSLLKKKKSFPFALSNSSNMQNIIRYPCSPLSSSRG 637

Query: 406  VMDLEQ-ENKPPQNEGFVSGHDAPLQSCRATPIKNGHGHNISSREGTPGSSRVKSVNVKK 230
            V++  + EN+ P+  G +   +  ++    TP+++      SSREGTP +SR  SVNVKK
Sbjct: 638  VVNHNEIENRVPETSGSLFSDNTSVRPSEVTPLRSEKSGYTSSREGTP-NSRSNSVNVKK 696

Query: 229  MQEMFKNAAEQNIRSIRAYVTELKERVAKLQYQKXXXXXXXXXXXXXXXXXXXXEVQDKT 50
            MQ MFKNAAE+NIRSIRAYVTELKERVAKLQYQK                    ++ D++
Sbjct: 697  MQRMFKNAAEENIRSIRAYVTELKERVAKLQYQKQLLVCQVLELEANEGTTAEMDIIDQS 756

Query: 49   PISWHLVFEEQRKQI 5
            P++WHL+FE+QRKQI
Sbjct: 757  PMAWHLLFEDQRKQI 771


>ref|XP_002326146.1| predicted protein [Populus trichocarpa] gi|222833339|gb|EEE71816.1|
            predicted protein [Populus trichocarpa]
          Length = 952

 Score =  164 bits (415), Expect = 1e-38
 Identities = 97/195 (49%), Positives = 123/195 (63%), Gaps = 1/195 (0%)
 Frame = -2

Query: 586  LEIVQQSIDKLMMALPDTVETSESKDQLGNNSVLPSPLRNSTNRSHIIRYPCSPMSSSSD 407
            L+ VQ+SID L+ +   T ET  SK QL    + P  L NS++  +IIR PCSP++SS  
Sbjct: 585  LDNVQKSIDMLVSSFSSTEETPNSKVQL-KKKIFPFALNNSSSMQNIIRSPCSPLTSSGG 643

Query: 406  VMDLEQENKPPQNEGFVSGHDAPLQSCRATPIKNG-HGHNISSREGTPGSSRVKSVNVKK 230
            V+D E EN+ P+N   +   ++  +   ATP K+G +G+   SRE TP S    SVNVKK
Sbjct: 644  VVDNEIENRAPENSNALFCSNSLARPSEATPPKSGKNGNRTPSREVTPASGS-NSVNVKK 702

Query: 229  MQEMFKNAAEQNIRSIRAYVTELKERVAKLQYQKXXXXXXXXXXXXXXXXXXXXEVQDKT 50
            MQ MFKNAAE+NIRSIRAYVTELKERVAKLQYQK                    E  D++
Sbjct: 703  MQRMFKNAAEENIRSIRAYVTELKERVAKLQYQKQLLVCQVLELEANEEATTETEKMDQS 762

Query: 49   PISWHLVFEEQRKQI 5
            P+ WHLVF++QRKQI
Sbjct: 763  PMPWHLVFDDQRKQI 777


>ref|XP_002321490.1| predicted protein [Populus trichocarpa] gi|222868486|gb|EEF05617.1|
            predicted protein [Populus trichocarpa]
          Length = 965

 Score =  160 bits (404), Expect = 2e-37
 Identities = 92/208 (44%), Positives = 125/208 (60%), Gaps = 14/208 (6%)
 Frame = -2

Query: 586  LEIVQQSIDKLMMALPDTVE------TSESKDQLGNNSVLPSPLRNSTNRSHIIRYPCSP 425
            LE VQ+SIDKL+M+LP+         T ++K+Q     +LP    N +NR + IR PCSP
Sbjct: 584  LENVQKSIDKLVMSLPNNNPQSNCEVTPKAKNQQKKKKILPLASSNGSNRQNFIRSPCSP 643

Query: 424  MSSSSDVMDLEQENKPPQNEGFVSGHDAPLQSCRATPIKNGHGHNISSREGTPGSSRVKS 245
            +S+S  +++ E EN+ P N+  V+    P +S + T  KN  G ++SSREGTPG  R  S
Sbjct: 644  LSTSRQILEKEIENRDPYNDDIVASETLP-ESEKETHKKNEEGGDVSSREGTPGYRRSSS 702

Query: 244  VNVKKMQEMFKNAAEQNIRSIRAYVTELKERVAKLQYQK--------XXXXXXXXXXXXX 89
            VN+KKMQ+MF+NAAE+N+R+IRAYVTELKERVAKLQYQK                     
Sbjct: 703  VNMKKMQKMFQNAAEENVRNIRAYVTELKERVAKLQYQKQLLVCQVLELEANEAAGYNME 762

Query: 88   XXXXXXXEVQDKTPISWHLVFEEQRKQI 5
                     Q++  +SWH+ F EQR+ I
Sbjct: 763  EEEENNINEQEEPQVSWHVTFREQRQLI 790


Top