BLASTX nr result

ID: Coptis25_contig00025742 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025742
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278553.1| PREDICTED: uncharacterized protein LOC100253...   156   5e-36
ref|XP_002315124.1| predicted protein [Populus trichocarpa] gi|2...   154   3e-35
ref|XP_002520815.1| conserved hypothetical protein [Ricinus comm...   149   6e-34
gb|AFK39264.1| unknown [Lotus japonicus]                              134   3e-29
ref|XP_002312191.1| predicted protein [Populus trichocarpa] gi|2...   134   3e-29

>ref|XP_002278553.1| PREDICTED: uncharacterized protein LOC100253518 isoform 1 [Vitis
           vinifera] gi|359486360|ref|XP_003633434.1| PREDICTED:
           uncharacterized protein LOC100253518 isoform 2 [Vitis
           vinifera]
          Length = 156

 Score =  156 bits (395), Expect = 5e-36
 Identities = 84/162 (51%), Positives = 117/162 (72%), Gaps = 9/162 (5%)
 Frame = -3

Query: 816 MGKTLPSTTKFHQLTKMATPN-FKNQK--QPIMSQNGGFLSKAETS------ICSDKLKL 664
           MGK+LP+TT+  +  ++ T   F++ K  +PI       +S  ET+      + S++++L
Sbjct: 1   MGKSLPTTTRLQEFARVVTSEKFQSPKHAKPISRNR---VSPPETTKLRGARLGSERVRL 57

Query: 663 KMESSSPLVLNQKERVPLAEIVSDCAKRWFRDTLKEAKAGDTAMQVLLAQMYFSGYGIPK 484
           KMESS       + R+PLA++VSDCAKRWF+DTLKEAKAGDT MQVL+ QMYFSGYG+ +
Sbjct: 58  KMESSEG-----QRRMPLAQVVSDCAKRWFQDTLKEAKAGDTTMQVLVGQMYFSGYGVSR 112

Query: 483 DPKMGKIWINKASKVRSAALKVGDKRPGYVASDSDSEELADE 358
           D + G+ WI++ASK RS+ALKVGDK PGY ASDSDS++L ++
Sbjct: 113 DAQKGRAWISRASKSRSSALKVGDKHPGYNASDSDSDDLKND 154


>ref|XP_002315124.1| predicted protein [Populus trichocarpa] gi|222864164|gb|EEF01295.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score =  154 bits (388), Expect = 3e-35
 Identities = 77/152 (50%), Positives = 106/152 (69%), Gaps = 3/152 (1%)
 Frame = -3

Query: 816 MGKTLPSTTKFHQLTKMAT---PNFKNQKQPIMSQNGGFLSKAETSICSDKLKLKMESSS 646
           MGK+LPST K  +L+K+ +   P  K    P++         +E  + S++LK+K    S
Sbjct: 1   MGKSLPSTGKLLELSKIVSSHKPRHKRSIVPVVPSR-----PSEVRVDSERLKVKKMEES 55

Query: 645 PLVLNQKERVPLAEIVSDCAKRWFRDTLKEAKAGDTAMQVLLAQMYFSGYGIPKDPKMGK 466
            L+L+ ++RVPL ++VSDCAKRWF DTLKEAK GD +MQVL+ QMYF+GYG+PKD + G 
Sbjct: 56  SLILDGQKRVPLGQVVSDCAKRWFEDTLKEAKTGDISMQVLVGQMYFNGYGVPKDVEKGS 115

Query: 465 IWINKASKVRSAALKVGDKRPGYVASDSDSEE 370
            WI++ASK R++  KV +KRPGY  SDSDSE+
Sbjct: 116 AWISRASKRRASVWKVSNKRPGYNGSDSDSED 147


>ref|XP_002520815.1| conserved hypothetical protein [Ricinus communis]
           gi|223539946|gb|EEF41524.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 159

 Score =  149 bits (377), Expect = 6e-34
 Identities = 82/156 (52%), Positives = 105/156 (67%), Gaps = 3/156 (1%)
 Frame = -3

Query: 816 MGKTLPSTTKFHQLTKMATPNFKNQKQPIMSQNGGFLSKAETSICSDKLKLKM---ESSS 646
           MGK+  ST     L K+ +  F   K         F S+    I +D+LK+K     SSS
Sbjct: 1   MGKSQFSTGDLQALAKIVS--FHKPKPKKSQLIIPFKSREVGPIDTDQLKVKKMEESSSS 58

Query: 645 PLVLNQKERVPLAEIVSDCAKRWFRDTLKEAKAGDTAMQVLLAQMYFSGYGIPKDPKMGK 466
            L+L+ K R+PL+ +VSDC +RWF+DTLKEAKAGD +MQVL+ QMYF+GYGIPKD + G+
Sbjct: 59  SLILDGKNRLPLSNVVSDCVRRWFQDTLKEAKAGDISMQVLVGQMYFNGYGIPKDSQKGR 118

Query: 465 IWINKASKVRSAALKVGDKRPGYVASDSDSEELADE 358
            WIN+ASK R +A KV DKRPGY ASDSDS+E  D+
Sbjct: 119 AWINRASKSRVSAWKVSDKRPGYAASDSDSDEGKDD 154


>gb|AFK39264.1| unknown [Lotus japonicus]
          Length = 101

 Score =  134 bits (336), Expect = 3e-29
 Identities = 64/101 (63%), Positives = 81/101 (80%)
 Frame = -3

Query: 660 MESSSPLVLNQKERVPLAEIVSDCAKRWFRDTLKEAKAGDTAMQVLLAQMYFSGYGIPKD 481
           MESSS    +   RVPL+E+V+DC KRWF+DTLKEAK GD  MQVL+ QMY +GYG+PKD
Sbjct: 1   MESSSGRPTSNG-RVPLSEVVADCVKRWFKDTLKEAKGGDINMQVLVGQMYCTGYGVPKD 59

Query: 480 PKMGKIWINKASKVRSAALKVGDKRPGYVASDSDSEELADE 358
            + G+IW+ KAS+VRS+  KVGDKRPGY ASDSDS++L ++
Sbjct: 60  AQKGRIWLTKASRVRSSVWKVGDKRPGYNASDSDSDDLEED 100


>ref|XP_002312191.1| predicted protein [Populus trichocarpa] gi|222852011|gb|EEE89558.1|
           predicted protein [Populus trichocarpa]
          Length = 102

 Score =  134 bits (336), Expect = 3e-29
 Identities = 64/101 (63%), Positives = 82/101 (81%)
 Frame = -3

Query: 660 MESSSPLVLNQKERVPLAEIVSDCAKRWFRDTLKEAKAGDTAMQVLLAQMYFSGYGIPKD 481
           ME+SS L+L+ ++RVPL  +VSDCAKRWF+DTLKEAK GD  MQVL+ QMYF+GYG+PKD
Sbjct: 1   MENSS-LILDGQKRVPLGLVVSDCAKRWFQDTLKEAKTGDITMQVLVGQMYFNGYGVPKD 59

Query: 480 PKMGKIWINKASKVRSAALKVGDKRPGYVASDSDSEELADE 358
            + G  W+++ASK R +  KV DKRPGY ASDSDS+E+ D+
Sbjct: 60  VEKGSDWMSRASKRRMSVWKVSDKRPGYNASDSDSDEVEDD 100


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