BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025734
         (520 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK21883.1| unknown [Picea sitchensis]                             134   6e-30
ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   131   7e-29
ref|XP_003526857.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   130   1e-28
gb|ACU19859.1| unknown [Glycine max]                                  130   1e-28
ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|2...   129   2e-28

>gb|ABK21883.1| unknown [Picea sitchensis]
          Length = 303

 Score =  134 bits (338), Expect = 6e-30
 Identities = 66/85 (77%), Positives = 70/85 (82%)
 Frame = +1

Query: 1   KLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTEATDGYDSVQVGYRRVRDKKLTMPEMG 180
           KLGMM+YFE            F EGNIVTQIKTEATDGY++VQVGYRRVRDKKLT PEMG
Sbjct: 94  KLGMMSYFEPGGKFVPVTVVGFHEGNIVTQIKTEATDGYEAVQVGYRRVRDKKLTKPEMG 153

Query: 181 HLNKVGAIPMRHLQEFRLTSVEGFE 255
           HLNKVG IPMRHLQEFRLTSV+GFE
Sbjct: 154 HLNKVGTIPMRHLQEFRLTSVDGFE 178



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 429 RWNFKRGPMSHGSKSHRAIGSIGAGTTPGR 518
           R NF+RGPMSHGSKSHR +GSIGAGTTPGR
Sbjct: 212 RHNFRRGPMSHGSKSHRQLGSIGAGTTPGR 241


>ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Vitis
           vinifera]
          Length = 281

 Score =  131 bits (329), Expect = 7e-29
 Identities = 63/86 (73%), Positives = 68/86 (79%)
 Frame = +1

Query: 1   KLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTEATDGYDSVQVGYRRVRDKKLTMPEMG 180
           KLGMM+YFE            FREGNIVTQ+KTEATDGY +VQVGYRRVRD+KLT PEMG
Sbjct: 72  KLGMMSYFEPEGKVVPVTVVGFREGNIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPEMG 131

Query: 181 HLNKVGAIPMRHLQEFRLTSVEGFEP 258
           HL K G IPMRHLQEFRL SV+GFEP
Sbjct: 132 HLEKAGTIPMRHLQEFRLVSVDGFEP 157



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/29 (86%), Positives = 28/29 (96%)
 Frame = +3

Query: 429 RWNFKRGPMSHGSKSHRAIGSIGAGTTPG 515
           R NF+RGPM+HGSKSHRA+GSIGAGTTPG
Sbjct: 190 RHNFRRGPMTHGSKSHRALGSIGAGTTPG 218


>ref|XP_003526857.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Glycine
           max]
          Length = 264

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/85 (72%), Positives = 71/85 (83%)
 Frame = +1

Query: 1   KLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTEATDGYDSVQVGYRRVRDKKLTMPEMG 180
           KLGMM+YFE            F+EGNIVTQIKTEATDGYD+VQVGYRRVRD+KLT PEMG
Sbjct: 55  KLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVRDRKLTKPEMG 114

Query: 181 HLNKVGAIPMRHLQEFRLTSVEGFE 255
           HL+KVGAIPMRHLQEFRL +++GF+
Sbjct: 115 HLHKVGAIPMRHLQEFRLQAIDGFD 139



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 429 RWNFKRGPMSHGSKSHRAIGSIGAGTTPGR 518
           R NFKRGPM+HGSKSHR +GSIGAGTTPGR
Sbjct: 173 RHNFKRGPMTHGSKSHRQLGSIGAGTTPGR 202


>gb|ACU19859.1| unknown [Glycine max]
          Length = 264

 Score =  130 bits (327), Expect = 1e-28
 Identities = 62/85 (72%), Positives = 71/85 (83%)
 Frame = +1

Query: 1   KLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTEATDGYDSVQVGYRRVRDKKLTMPEMG 180
           KLGMM+YFE            F+EGNIVTQIKTEATDGYD+VQVGYRRVRD+KLT PEMG
Sbjct: 55  KLGMMSYFESDGEVVPVTVVGFKEGNIVTQIKTEATDGYDAVQVGYRRVRDRKLTKPEMG 114

Query: 181 HLNKVGAIPMRHLQEFRLTSVEGFE 255
           HL+KVGAIPMRHLQEFRL +++GF+
Sbjct: 115 HLHKVGAIPMRHLQEFRLQAIDGFD 139



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/30 (86%), Positives = 28/30 (93%)
 Frame = +3

Query: 429 RWNFKRGPMSHGSKSHRAIGSIGAGTTPGR 518
           R NFKRGPM+HGSKSHR +GSIGAGTTPGR
Sbjct: 173 RHNFKRGPMTHGSKSHRQLGSIGAGTTPGR 202


>ref|XP_002319213.1| predicted protein [Populus trichocarpa] gi|222857589|gb|EEE95136.1|
           predicted protein [Populus trichocarpa]
          Length = 222

 Score =  129 bits (325), Expect = 2e-28
 Identities = 63/85 (74%), Positives = 67/85 (78%)
 Frame = +1

Query: 1   KLGMMTYFEXXXXXXXXXXXXFREGNIVTQIKTEATDGYDSVQVGYRRVRDKKLTMPEMG 180
           KLGMMTYFE            FREGNIVTQIKT+ATDGYD+VQVGYRRVRDKKLT PEMG
Sbjct: 13  KLGMMTYFEPNGKVVPVTVVGFREGNIVTQIKTDATDGYDAVQVGYRRVRDKKLTKPEMG 72

Query: 181 HLNKVGAIPMRHLQEFRLTSVEGFE 255
           HL K G IPMRHLQEFRL  ++GFE
Sbjct: 73  HLEKAGVIPMRHLQEFRLQGLDGFE 97



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 28/30 (93%), Positives = 29/30 (96%)
 Frame = +3

Query: 429 RWNFKRGPMSHGSKSHRAIGSIGAGTTPGR 518
           R NFKRGPMSHGSKSHRA+GSIGAGTTPGR
Sbjct: 131 RHNFKRGPMSHGSKSHRALGSIGAGTTPGR 160