BLASTX nr result

ID: Coptis25_contig00025733 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025733
         (983 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    59   2e-06

>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 26/88 (29%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
 Frame = -3

Query: 888 MLAWNCHGIGTNTVVQSLEDLIHAHDPDVISLAETKVGSRRIKAVGKKIKTGKNYCVEAD 709
           +L+WNC G+G+ + + +L  L+ + +P ++ L+ETK+ S  +++V KK+K      V+ +
Sbjct: 4   ILSWNCRGMGSPSALSALRRLLASENPQIVFLSETKLKSYEMESVKKKLKWEHMVAVDCE 63

Query: 708 SS----KGGLAVFWKEVCDVEIFGGTTN 637
                 +GGLA+ W+    V++   ++N
Sbjct: 64  GECRKRRGGLAMLWRSEIKVQVMSMSSN 91


Top