BLASTX nr result
ID: Coptis25_contig00025729
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00025729
(1363 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95414.1| transposon protein, putative, unclassified [Oryza... 318 2e-84
gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japo... 318 2e-84
ref|XP_003532941.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-l... 273 6e-71
ref|NP_001068457.2| Os11g0681400 [Oryza sativa Japonica Group] g... 264 4e-68
gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [... 258 3e-66
>gb|ABA95414.1| transposon protein, putative, unclassified [Oryza sativa Japonica
Group]
Length = 862
Score = 318 bits (815), Expect = 2e-84
Identities = 166/358 (46%), Positives = 219/358 (61%), Gaps = 2/358 (0%)
Frame = -1
Query: 1360 RWCLWHIMKKLPEKLGGCNQYDPIKDAMENAVYDSLTCEEFEGKWNSIIHNFSLQKNNWL 1181
RWCLWHIMKK+PEKLGG +Y+ I + N VYDSL ++F+ W +I FSLQ N WL
Sbjct: 327 RWCLWHIMKKIPEKLGGYLEYEVISSTLSNVVYDSLNRDDFDKGWMKMIDEFSLQDNEWL 386
Query: 1180 SRLYKERNFWVPAFMKGTFWAGMSSPQRSEKLIAFFDGFVYPNTSIKQFVEQYENALRSK 1001
+ LY R WVPA++K TFWAGMSS QRSE + AFFDG+V T++KQFVEQY+NALR K
Sbjct: 387 AGLYDNRELWVPAYVKDTFWAGMSSSQRSESVNAFFDGYVNARTTLKQFVEQYDNALRDK 446
Query: 1000 VQKENEEDFNSFDRWIPCITFYPLEKQFQDAYTTEIFKGFQNEIKGKIYCAISSIKEECG 821
V+KEN+ D SF IPCIT Y E+QFQ AYT + FK FQ+E++GKIY + K E
Sbjct: 447 VEKENKSDCKSFQEAIPCITHYEFERQFQVAYTNKKFKEFQDELRGKIYYYATLRKTEGL 506
Query: 820 CQVYNVTEDMFGGTTRRAT-FSVCFKEGFCDIRCNCLLFEFRGILCKHALTVLLQKQVHT 644
++V ED G R + V F + CD+ C C FEFRGILC+H L++L +
Sbjct: 507 VHTFSVREDRKIGEQRVVSELLVLFNQEDCDLHCECRHFEFRGILCRHILSILPLVDIEK 566
Query: 643 LPEKFFLRRWRKDVKRHHKKIKIIYADWTVNPENERFDKMCKAFYEVADLAAVDEDKINV 464
+P K+ L+RWRKD KR H IK Y D P RFD +CK F EVA+ +V + N+
Sbjct: 567 VPSKYILQRWRKDFKRKHTFIKCSYDDQLDTPIVRRFDTLCKRFNEVAENGSVSDALCNL 626
Query: 463 VICWTKRLLNEINLNDGTRESDNCTPKVGTYVHSG-NSGPSAKESVSVGRPLAVHHKG 293
V+ L +I+ + G++E + Y +G N K+ V P++V +G
Sbjct: 627 VMDGLNELQIKIDAHHGSKE-------IQEYQQNGKNKDMVLKQGKMVLSPISVRRRG 677
>gb|EEE52553.1| hypothetical protein OsJ_34801 [Oryza sativa Japonica Group]
Length = 965
Score = 318 bits (815), Expect = 2e-84
Identities = 166/358 (46%), Positives = 219/358 (61%), Gaps = 2/358 (0%)
Frame = -1
Query: 1360 RWCLWHIMKKLPEKLGGCNQYDPIKDAMENAVYDSLTCEEFEGKWNSIIHNFSLQKNNWL 1181
RWCLWHIMKK+PEKLGG +Y+ I + N VYDSL ++F+ W +I FSLQ N WL
Sbjct: 327 RWCLWHIMKKIPEKLGGYLEYEVISSTLSNVVYDSLNRDDFDKGWMKMIDEFSLQDNEWL 386
Query: 1180 SRLYKERNFWVPAFMKGTFWAGMSSPQRSEKLIAFFDGFVYPNTSIKQFVEQYENALRSK 1001
+ LY R WVPA++K TFWAGMSS QRSE + AFFDG+V T++KQFVEQY+NALR K
Sbjct: 387 AGLYDNRELWVPAYVKDTFWAGMSSSQRSESVNAFFDGYVNARTTLKQFVEQYDNALRDK 446
Query: 1000 VQKENEEDFNSFDRWIPCITFYPLEKQFQDAYTTEIFKGFQNEIKGKIYCAISSIKEECG 821
V+KEN+ D SF IPCIT Y E+QFQ AYT + FK FQ+E++GKIY + K E
Sbjct: 447 VEKENKSDCKSFQEAIPCITHYEFERQFQVAYTNKKFKEFQDELRGKIYYYATLRKTEGL 506
Query: 820 CQVYNVTEDMFGGTTRRAT-FSVCFKEGFCDIRCNCLLFEFRGILCKHALTVLLQKQVHT 644
++V ED G R + V F + CD+ C C FEFRGILC+H L++L +
Sbjct: 507 VHTFSVREDRKIGEQRVVSELLVLFNQEDCDLHCECRHFEFRGILCRHILSILPLVDIEK 566
Query: 643 LPEKFFLRRWRKDVKRHHKKIKIIYADWTVNPENERFDKMCKAFYEVADLAAVDEDKINV 464
+P K+ L+RWRKD KR H IK Y D P RFD +CK F EVA+ +V + N+
Sbjct: 567 VPSKYILQRWRKDFKRKHTFIKCSYDDQLDTPIVRRFDTLCKRFNEVAENGSVSDALCNL 626
Query: 463 VICWTKRLLNEINLNDGTRESDNCTPKVGTYVHSG-NSGPSAKESVSVGRPLAVHHKG 293
V+ L +I+ + G++E + Y +G N K+ V P++V +G
Sbjct: 627 VMDGLNELQIKIDAHHGSKE-------IQEYQQNGKNKDMVLKQGKMVLSPISVRRRG 677
>ref|XP_003532941.1| PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Glycine max]
Length = 669
Score = 273 bits (699), Expect = 6e-71
Identities = 136/315 (43%), Positives = 195/315 (61%), Gaps = 2/315 (0%)
Frame = -1
Query: 1363 RRWCLWHIMKKLPEKLGGCNQYDPIKDAMENAVYDSLTCEEFEGKWNSIIHNFSLQKNNW 1184
+RWCL HIMK++ EKL G +Y+ IK + AVYDS + ++F W +I++ +L N W
Sbjct: 336 QRWCLSHIMKRVSEKLRGYPRYESIKTDFDGAVYDSFSKDDFNESWKKLIYSHNLHDNEW 395
Query: 1183 LSRLYKERNFWVPAFMKGTFWAGMSSPQRSEKLIAFFDGFVYPNTSIKQFVEQYENALRS 1004
L+ LY ER+ WVP ++K TFWAGMS+ R+E + AFFDG+V TS+KQF +Q++NA++
Sbjct: 396 LNSLYNERHRWVPVYVKDTFWAGMSTIDRNESVHAFFDGYVCSKTSLKQFFKQFDNAMKD 455
Query: 1003 KVQKENEEDFNSFDRWIPCITFYPLEKQFQDAYTTEIFKGFQNEIKGKIYCAISSIKEEC 824
KV+KE DFNSF+ IPC + + +E QFQ YT FK FQ E+ +YC + K+E
Sbjct: 456 KVEKECLADFNSFNNLIPCRSHFGIEYQFQKVYTNGKFKEFQEEVACIMYCNAAFEKKEG 515
Query: 823 GCQVYNVTED-MFGGTTRRATFSVCFKEGFCDIRCNCLLFEFRGILCKHALTVL-LQKQV 650
Y+V E + TF+V F E +++C C LFEF+GILC+H L++L L ++
Sbjct: 516 LVSAYSVVESKKIQEAIKYVTFNVQFNEEDFEVQCECHLFEFKGILCRHILSLLKLIRKT 575
Query: 649 HTLPEKFFLRRWRKDVKRHHKKIKIIYADWTVNPENERFDKMCKAFYEVADLAAVDEDKI 470
++P K+ WRKD+KR H ++ Y D NPE ER DKMC AF EVA + +
Sbjct: 576 ESVPSKYVFSHWRKDLKRKHTLVRSSYGDLIANPEAERLDKMCNAFQEVACMGVNTDVDF 635
Query: 469 NVVICWTKRLLNEIN 425
V+ W L E++
Sbjct: 636 KKVMKWIDDLKVELS 650
>ref|NP_001068457.2| Os11g0681400 [Oryza sativa Japonica Group]
gi|255680367|dbj|BAF28820.2| Os11g0681400 [Oryza sativa
Japonica Group]
Length = 715
Score = 264 bits (675), Expect = 4e-68
Identities = 142/320 (44%), Positives = 191/320 (59%), Gaps = 2/320 (0%)
Frame = -1
Query: 1246 EEFEGKWNSIIHNFSLQKNNWLSRLYKERNFWVPAFMKGTFWAGMSSPQRSEKLIAFFDG 1067
++F+ W +I FSLQ N WL+ LY R WVPA++K TFWAGMSS QRSE + AFFDG
Sbjct: 221 DDFDKGWMKMIDEFSLQDNEWLAGLYDNRELWVPAYVKDTFWAGMSSSQRSESVNAFFDG 280
Query: 1066 FVYPNTSIKQFVEQYENALRSKVQKENEEDFNSFDRWIPCITFYPLEKQFQDAYTTEIFK 887
+V T++KQFVEQY+NALR KV+KEN+ D SF IPCIT Y E+QFQ AYT + FK
Sbjct: 281 YVNARTTLKQFVEQYDNALRDKVEKENKSDCKSFQEAIPCITHYEFERQFQVAYTNKKFK 340
Query: 886 GFQNEIKGKIYCAISSIKEECGCQVYNVTEDMFGGTTRRAT-FSVCFKEGFCDIRCNCLL 710
FQ+E++GKIY + K E ++V ED G R + V F + CD+ C C
Sbjct: 341 EFQDELRGKIYYYATLRKTEGLVHTFSVREDRKIGEQRVVSELLVLFNQEDCDLHCECRH 400
Query: 709 FEFRGILCKHALTVLLQKQVHTLPEKFFLRRWRKDVKRHHKKIKIIYADWTVNPENERFD 530
FEFRGILC+H L++L + +P K+ L+RWRKD KR H IK Y D P RFD
Sbjct: 401 FEFRGILCRHILSILPLVDIEKVPSKYILQRWRKDFKRKHTFIKCSYDDQLDTPIVRRFD 460
Query: 529 KMCKAFYEVADLAAVDEDKINVVICWTKRLLNEINLNDGTRESDNCTPKVGTYVHSG-NS 353
+CK F EVA+ +V + N+V+ L +I+ + G++E + Y +G N
Sbjct: 461 TLCKRFNEVAENGSVSDALCNLVMDGLNELQIKIDAHHGSKE-------IQEYQQNGKNK 513
Query: 352 GPSAKESVSVGRPLAVHHKG 293
K+ V P++V +G
Sbjct: 514 DMVLKQGKMVLSPISVRRRG 533
>gb|ABD33026.2| Cyclin-like F-box; FAR1; Zinc finger, SWIM-type [Medicago truncatula]
Length = 1116
Score = 258 bits (658), Expect = 3e-66
Identities = 137/314 (43%), Positives = 183/314 (58%), Gaps = 2/314 (0%)
Frame = -1
Query: 1360 RWCLWHIMKKLPEKLGGCNQYDPIKDAMENAVYDSLTCEEFEGKWNSIIHNFSLQKNNWL 1181
RWCLWH+MKK+PEKLG + Y+ IK + +AVYDS + +F KW +I + L N WL
Sbjct: 656 RWCLWHLMKKVPEKLGRHSHYESIKLLLHDAVYDSSSISDFMEKWKKMIECYELHDNEWL 715
Query: 1180 SRLYKERNFWVPAFMKGTFWAGMSSPQRSEKLIAFFDGFVYPNTSIKQFVEQYENALRSK 1001
L+ ER WVP +++ TFWAGMS+ QRSE + +FFDG+V T++KQFVEQY+NAL+ K
Sbjct: 716 KGLFDERYRWVPVYVRDTFWAGMSTTQRSESMNSFFDGYVSSKTTLKQFVEQYDNALKDK 775
Query: 1000 VQKENEEDFNSFDRWIPCITFYPLEKQFQDAYTTEIFKGFQNEIKGKIYC-AISSIKEEC 824
++KE+ DF SF+ I CI+ + E QFQ A+T FK FQ EI IYC A E
Sbjct: 776 IEKESMADFVSFNTTIACISLFGFESQFQKAFTNAKFKEFQIEIASMIYCNAFLEGMENL 835
Query: 823 GCQVYNVTEDMFGGTTRRATFSVCFKEGFCDIRCNCLLFEFRGILCKHALTVL-LQKQVH 647
+ + F V F E +I+C C LFEF+GILC+H L VL L +
Sbjct: 836 NSTFCVIESKKVYDRFKDTRFRVIFNEKDFEIQCACCLFEFKGILCRHILCVLQLTGKTE 895
Query: 646 TLPEKFFLRRWRKDVKRHHKKIKIIYADWTVNPENERFDKMCKAFYEVADLAAVDEDKIN 467
++P + L RWRKD+KR H IK + N E + K C AFYEV + ED +
Sbjct: 896 SVPSCYILSRWRKDIKRRHTLIK---CGFDGNVELQLVGKACDAFYEVVSVGIHTEDDLL 952
Query: 466 VVICWTKRLLNEIN 425
V+ L E+N
Sbjct: 953 KVMNRINELKIELN 966