BLASTX nr result

ID: Coptis25_contig00025710 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025710
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002329995.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
dbj|BAB10320.1| mutator-like transposase-like protein [Arabidops...    56   4e-06
ref|XP_002318925.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-06
ref|XP_002320261.1| predicted protein [Populus trichocarpa] gi|2...    55   8e-06

>ref|XP_002302803.1| predicted protein [Populus trichocarpa] gi|222844529|gb|EEE82076.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 23/56 (41%), Positives = 35/56 (62%)
 Frame = +2

Query: 2   CNWWRIEGFPCAHALRSILADGLNVYTYCDKFFYSQTFRDSYSRAIVPVENSKMPA 169
           C  W++ GFPC+HA+  +   G +VY YC KF+ ++ +R +YS +I PV     PA
Sbjct: 467 CREWQLNGFPCSHAVAVLQHIGRDVYDYCSKFYTTEAYRLTYSESIKPVPTVDKPA 522


>ref|XP_002329995.1| predicted protein [Populus trichocarpa] gi|222871420|gb|EEF08551.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
 Frame = +2

Query: 2   CNWWRIEGFPCAHALRSILADGLNVYTYCDKFFYSQTFRDSYSRAIVPVENSKMPAKIPS 181
           C  W++ GFPC HAL  I   G   Y YC ++F ++++R +YS ++ PV N  MP +  S
Sbjct: 471 CKEWQLTGFPCCHALAVIGCIGRCPYDYCSRYFTTESYRLTYSESVHPVTNVDMPVEKDS 530

Query: 182 ---VPDLLPP 202
              V  + PP
Sbjct: 531 SQVVVTVTPP 540


>dbj|BAB10320.1| mutator-like transposase-like protein [Arabidopsis thaliana]
           gi|22531088|gb|AAM97048.1| unknown protein [Arabidopsis
           thaliana] gi|23197938|gb|AAN15496.1| unknown protein
           [Arabidopsis thaliana]
          Length = 757

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 23/62 (37%), Positives = 37/62 (59%)
 Frame = +2

Query: 2   CNWWRIEGFPCAHALRSILADGLNVYTYCDKFFYSQTFRDSYSRAIVPVENSKMPAKIPS 181
           C  WR+ G PC+HA+  +   G + Y YC ++F S+++R +Y+ +I PV N+ M   I  
Sbjct: 641 CKVWRLTGLPCSHAVAVVECIGKSPYEYCSRYFTSESYRLTYAESINPVPNTTMTMMILE 700

Query: 182 VP 187
            P
Sbjct: 701 EP 702


>ref|XP_002318925.1| predicted protein [Populus trichocarpa] gi|222857301|gb|EEE94848.1|
           predicted protein [Populus trichocarpa]
          Length = 580

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/55 (40%), Positives = 34/55 (61%)
 Frame = +2

Query: 2   CNWWRIEGFPCAHALRSILADGLNVYTYCDKFFYSQTFRDSYSRAIVPVENSKMP 166
           C  W++ G PC HAL  I   G + Y YC ++F ++++R +YS ++ PV N  MP
Sbjct: 471 CKDWQLSGLPCCHALAVIGCIGRSPYDYCSRYFTTESYRLTYSESVHPVPNVDMP 525


>ref|XP_002320261.1| predicted protein [Populus trichocarpa] gi|222861034|gb|EEE98576.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 22/55 (40%), Positives = 33/55 (60%)
 Frame = +2

Query: 2   CNWWRIEGFPCAHALRSILADGLNVYTYCDKFFYSQTFRDSYSRAIVPVENSKMP 166
           C  W++ GFPC HA+  +   G +VY YC K++ ++ FR +YS +I PV     P
Sbjct: 467 CREWQLNGFPCLHAVAVLQHIGRDVYDYCSKYYTTEAFRLTYSESIKPVPTVDKP 521


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