BLASTX nr result

ID: Coptis25_contig00025673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025673
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN81443.1| hypothetical protein VITISV_004291 [Vitis vinifera]    57   2e-06
emb|CBI23735.3| unnamed protein product [Vitis vinifera]               56   3e-06

>emb|CAN81443.1| hypothetical protein VITISV_004291 [Vitis vinifera]
          Length = 151

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 27/60 (45%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
 Frame = -3

Query: 177 LTKQKNESMETHQQQSWK-LKLSYKNATMLVCFLNLVTVLILLQGFFSGVSSKRLSRNQP 1
           + +QKN   E   QQ W+ L+ S+++AT++VCFLNL+  L+LLQGF S  S+++ S  +P
Sbjct: 1   MEEQKNRR-EMETQQPWRSLRFSFRSATIIVCFLNLIAALLLLQGFLSSASTRKFSTPRP 59


>emb|CBI23735.3| unnamed protein product [Vitis vinifera]
          Length = 142

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/52 (51%), Positives = 39/52 (75%), Gaps = 1/52 (1%)
 Frame = -3

Query: 153 METHQQQSWK-LKLSYKNATMLVCFLNLVTVLILLQGFFSGVSSKRLSRNQP 1
           MET  QQ W+ L+ S++NAT++VCFLNL+  L+LLQGF S  S+++ S  +P
Sbjct: 1   MET--QQPWRSLRFSFRNATIIVCFLNLIAALLLLQGFLSSASTRKFSTPRP 50


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