BLASTX nr result

ID: Coptis25_contig00025658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025658
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325700.1| BED finger-nbs-lrr resistance protein [Popul...   102   8e-20
ref|XP_002325701.1| nbs-lrr resistance protein [Populus trichoca...    92   2e-16
ref|XP_002325306.1| BED finger-nbs-lrr resistance protein [Popul...    87   3e-15
emb|CBI20133.3| unnamed protein product [Vitis vinifera]               86   7e-15
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul...    85   2e-14

>ref|XP_002325700.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222862575|gb|EEF00082.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1159

 Score =  102 bits (255), Expect = 8e-20
 Identities = 79/273 (28%), Positives = 127/273 (46%), Gaps = 24/273 (8%)
 Frame = +1

Query: 10   CPNVKFLFSSKLFKQLQKLAEVRVTDCGKFKEIIIAT-EDEETQGEESCTSAPXXXXXXX 186
            C ++K LF   L   L  L  + V  C K +EII+ T  DEE+    +    P       
Sbjct: 840  CSSMKKLFPLVLLPNLVNLENISVFGCEKMEEIIVGTRSDEESSSNSTEFKLPKLRYLAL 899

Query: 187  XXXXXXXXXFSRRSVQHFQNLELISVYNCGELEELME-----------------GKQEKS 315
                      S + +    +L+ I V NC  +E L+                  GK E+ 
Sbjct: 900  EDLPELKRICSAKLI--CDSLQQIEVRNCKSMESLVPSSWICLVNLERIIVTGCGKMEEI 957

Query: 316  EGSCSSNSDFNNSTIITLPSLQFI-CLDEVNLKRLWSGIVVCKSLRKLEVYDCHELKTLF 492
             G   ++ + +N+T   LP L+ +  +D   LKR+ S  ++C SLR++EV +C+ ++ L 
Sbjct: 958  IGGTRADEESSNNTEFKLPKLRSLESVDLPELKRICSAKLICDSLREIEVRNCNSMEILV 1017

Query: 493  STKSLQHCPNLEEITVQQCSQMEELLTSGE-----DSGEGSTNTTTDTISVPRLKILWLE 657
             + S     NLE I V  C +M+E++         D GE S+N  T+   +P+L+ L L 
Sbjct: 1018 PS-SWICLVNLERIIVAGCGKMDEIICGTRSDEEGDIGEESSNNNTE-FKLPKLRSLLLF 1075

Query: 658  SLPKLESIWKGVMACDCLQEVVVDECVQLKKLP 756
             LP+L+SI    + CD L  + +  C  LK++P
Sbjct: 1076 ELPELKSICSAKLICDSLGTISIRNCENLKRMP 1108



 Score = 67.4 bits (163), Expect = 4e-09
 Identities = 46/175 (26%), Positives = 79/175 (45%)
 Frame = +1

Query: 229  VQHFQNLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEVNL 408
            ++H   LE+I + +C  +E L+      S   C S +  ++                   
Sbjct: 789  IEHSIELEVIHIEDCNSMESLIS-----SSWFCPSPTPLSS------------------- 824

Query: 409  KRLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGEDS 588
               ++G+     L++     C  +K LF    L +  NLE I+V  C +MEE++      
Sbjct: 825  ---YNGVF--SGLKEFNCSGCSSMKKLFPLVLLPNLVNLENISVFGCEKMEEIIVGTRSD 879

Query: 589  GEGSTNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKL 753
             E S+N+T     +P+L+ L LE LP+L+ I    + CD LQ++ V  C  ++ L
Sbjct: 880  EESSSNST--EFKLPKLRYLALEDLPELKRICSAKLICDSLQQIEVRNCKSMESL 932


>ref|XP_002325701.1| nbs-lrr resistance protein [Populus trichocarpa]
            gi|222862576|gb|EEF00083.1| nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1031

 Score = 91.7 bits (226), Expect = 2e-16
 Identities = 56/172 (32%), Positives = 97/172 (56%), Gaps = 1/172 (0%)
 Frame = +1

Query: 244  NLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEV-NLKRLW 420
            NLE I+V  C ++EE++ G +   E S       +N+T   LP L+ + L  +  LK + 
Sbjct: 849  NLEKITVSACKKMEEIIGGTRSDEESS-------SNNTEFKLPKLRSLALFNLPELKSIC 901

Query: 421  SGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGEDSGEGS 600
            S  + C SL+++EV++C+ ++ L  +  +    NLE+ITV  C +M+E++       E S
Sbjct: 902  SAKLTCDSLQQIEVWNCNSMEILVPSSWIS-LVNLEKITVSACKKMKEIIGGTRSDEESS 960

Query: 601  TNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKLP 756
            +N T     +P+L+ L L  LP+L+ I    + CD L+ + V +C +LK++P
Sbjct: 961  SNNTE--FKLPKLRSLALSWLPELKRICSAKLICDSLRMIEVYKCQKLKRMP 1010



 Score = 90.9 bits (224), Expect = 3e-16
 Identities = 57/171 (33%), Positives = 95/171 (55%), Gaps = 1/171 (0%)
 Frame = +1

Query: 244  NLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEV-NLKRLW 420
            NLE I+V  C ++EE++ G++   E S         ST   LP L+ + L  +  LK + 
Sbjct: 766  NLEKITVRGCEKMEEIIGGRRSDEESS---------STEFKLPKLRSLALFNLPELKSIC 816

Query: 421  SGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGEDSGEGS 600
            S  + C SL+++EV++C+ ++ L  +  +    NLE+ITV  C +MEE++       E S
Sbjct: 817  SAKLTCDSLQQIEVWNCNSMEILVPSSWIS-LVNLEKITVSACKKMEEIIGGTRSDEESS 875

Query: 601  TNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKL 753
            +N T     +P+L+ L L +LP+L+SI    + CD LQ++ V  C  ++ L
Sbjct: 876  SNNT--EFKLPKLRSLALFNLPELKSICSAKLTCDSLQQIEVWNCNSMEIL 924



 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 42/116 (36%), Positives = 71/116 (61%)
 Frame = +1

Query: 406  LKRLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGED 585
            LK + S  + C SL+K+EV++C+ ++ L  +  +    NLE+ITV+ C +MEE++  G  
Sbjct: 729  LKNICSAKLTCDSLQKIEVWNCNSMEILVPSSWIS-LVNLEKITVRGCEKMEEII-GGRR 786

Query: 586  SGEGSTNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKL 753
            S E S++T      +P+L+ L L +LP+L+SI    + CD LQ++ V  C  ++ L
Sbjct: 787  SDEESSSTE---FKLPKLRSLALFNLPELKSICSAKLTCDSLQQIEVWNCNSMEIL 839


>ref|XP_002325306.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222862181|gb|EEE99687.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1570

 Score = 87.4 bits (215), Expect = 3e-15
 Identities = 81/291 (27%), Positives = 127/291 (43%), Gaps = 36/291 (12%)
 Frame = +1

Query: 10   CPNVKFLFSSKLFKQLQKLAEVRVTDCGKFKEII--IATEDEETQGEESCT-----SAPX 168
            C  +K LF   L   L  L  + V +C K +EII    +++E   GEES         P 
Sbjct: 907  CKGMKKLFPPVLLPYLVNLERIDVKECEKMEEIIGGAISDEEGDMGEESSVRNTEFKLPK 966

Query: 169  XXXXXXXXXXXXXXXFSRR----SVQHFQ-------------------NLELISVYNCGE 279
                            S +    S+Q  +                   NLE I V  C +
Sbjct: 967  LRELHLGDLPELKSICSAKLICDSLQKIEVRNCSIREILVPSSWIGLVNLEEIVVEGCEK 1026

Query: 280  LEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEV-NLKRLWSGIVVCKSLRKL 456
            +EE++ G +   EG     S   N T   LP L+ + L ++  LK + S  ++C SLR +
Sbjct: 1027 MEEIIGGARSDEEGVMGEESSIRN-TEFKLPKLRELHLGDLPELKSICSAKLICDSLRVI 1085

Query: 457  EVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGE-----DSGEGSTNTTTDT 621
            EV +C  ++ L  +  + H   L+ I V++C +MEE++         D GE S+   T+ 
Sbjct: 1086 EVRNCSIIEVLVPSSWI-HLVKLKRIDVKECEKMEEIIGGARSDEEGDMGEESSVRNTE- 1143

Query: 622  ISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKLPQFSVKH 774
              +P+L+ L L  LP+L+SI    + CD L+ + V  C  ++ L   S  H
Sbjct: 1144 FKLPKLRELHLGDLPELKSICSAKLICDSLRVIEVRNCSIIEVLVPSSWIH 1194



 Score = 85.9 bits (211), Expect = 1e-14
 Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
 Frame = +1

Query: 244  NLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEV-NLKRLW 420
            NLE I V  C ++EE++ G     EG     S   N T   LP L+ + L ++  LK + 
Sbjct: 924  NLERIDVKECEKMEEIIGGAISDEEGDMGEESSVRN-TEFKLPKLRELHLGDLPELKSIC 982

Query: 421  SGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGEDSGEG- 597
            S  ++C SL+K+EV +C  ++ +    S     NLEEI V+ C +MEE++       EG 
Sbjct: 983  SAKLICDSLQKIEVRNC-SIREILVPSSWIGLVNLEEIVVEGCEKMEEIIGGARSDEEGV 1041

Query: 598  ---STNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKLPQFSV 768
                ++       +P+L+ L L  LP+L+SI    + CD L+ + V  C  ++ L   S 
Sbjct: 1042 MGEESSIRNTEFKLPKLRELHLGDLPELKSICSAKLICDSLRVIEVRNCSIIEVLVPSSW 1101

Query: 769  KH--KFSPLTLKE 801
             H  K   + +KE
Sbjct: 1102 IHLVKLKRIDVKE 1114



 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 55/175 (31%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
 Frame = +1

Query: 244  NLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEV-NLKRLW 420
            NLE I V  C ++EE++ G +   EG     S   N T   LP L+ + L  +  LK + 
Sbjct: 1348 NLEEIVVEGCEKMEEIIGGARSDEEGVMGEESSIRN-TEFKLPKLRQLHLKNLLELKSIC 1406

Query: 421  SGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELL---TSGEDSG 591
            S  ++C SL  +EV++C  ++ +    S      L+ I V +C +MEE++    S E+  
Sbjct: 1407 SAKLICDSLEVIEVWNC-SIREILVPSSWIRLVKLKVIVVGRCVKMEEIIGGTRSDEEGV 1465

Query: 592  EGSTNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKLP 756
             G  ++++  ++ P+LK L L  LP+L SI    + CD ++ + + EC +LK++P
Sbjct: 1466 MGEESSSSTELNFPQLKTLKLIWLPELRSICSAKLICDSMKLIHIRECQKLKRMP 1520



 Score = 79.0 bits (193), Expect = 1e-12
 Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 5/173 (2%)
 Frame = +1

Query: 235  HFQNLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEV-NLK 411
            H   L+ I V  C ++EE++ G +   EG     S   N T   LP L+ + L ++  LK
Sbjct: 1103 HLVKLKRIDVKECEKMEEIIGGARSDEEGDMGEESSVRN-TEFKLPKLRELHLGDLPELK 1161

Query: 412  RLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELL---TSGE 582
             + S  ++C SLR +EV +C  ++ L  +  + H  NL+ I V+ C +MEE++    S E
Sbjct: 1162 SICSAKLICDSLRVIEVRNCSIIEVLVPSSWI-HLVNLKRIDVKGCEKMEEIIGGAISDE 1220

Query: 583  DSGEGSTNTTTDT-ISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECV 738
            +   G  ++  +T   +P+L+ L L  L +L+SI    + CD L+ V ++E +
Sbjct: 1221 EGVMGEESSIRNTEFKLPKLRELHLRDLLELKSICSAKLICDSLKCVKMEEII 1273



 Score = 64.3 bits (155), Expect = 3e-08
 Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
 Frame = +1

Query: 226  SVQHFQNLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEVN 405
            S+++   LE I + NC  +E L+      S   CS+           LP     C     
Sbjct: 853  SLKYATELEYIKILNCNSMESLVS-----SSWLCSA----------PLPQPSPSC----- 892

Query: 406  LKRLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELL---TS 576
               ++SG      L++L    C  +K LF    L +  NLE I V++C +MEE++    S
Sbjct: 893  -NGIFSG------LKRLYCSGCKGMKKLFPPVLLPYLVNLERIDVKECEKMEEIIGGAIS 945

Query: 577  GEDSGEGSTNTTTDT-ISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDEC 735
             E+   G  ++  +T   +P+L+ L L  LP+L+SI    + CD LQ++ V  C
Sbjct: 946  DEEGDMGEESSVRNTEFKLPKLRELHLGDLPELKSICSAKLICDSLQKIEVRNC 999



 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 1/168 (0%)
 Frame = +1

Query: 235  HFQNLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICL-DEVNLK 411
            H  NL+ I V  C ++EE++ G     EG     S   N T   LP L+ + L D + LK
Sbjct: 1194 HLVNLKRIDVKGCEKMEEIIGGAISDEEGVMGEESSIRN-TEFKLPKLRELHLRDLLELK 1252

Query: 412  RLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGEDSG 591
             + S  ++C SL+                     C  +EEI     S  E       D G
Sbjct: 1253 SICSAKLICDSLK---------------------CVKMEEIIGGTRSDEEG------DMG 1285

Query: 592  EGSTNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDEC 735
            E S+   T+   +P+L+ L L  LP+L+SI    + CD LQ + V  C
Sbjct: 1286 EESSIRNTE-FKLPKLRELHLGDLPELKSICSAKLICDSLQVIEVRNC 1332


>emb|CBI20133.3| unnamed protein product [Vitis vinifera]
          Length = 656

 Score = 86.3 bits (212), Expect = 7e-15
 Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 3/143 (2%)
 Frame = +1

Query: 337 SDFNNSTIITLPSLQFICLDEVNLKRLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQ-H 513
           +  NN  +  LP+L       V  K   + IV C SL+ L+V  C  LK LF+ + ++ H
Sbjct: 498 ASLNNLYLNELPNLS------VFFKFQPTDIVSCFSLKHLQVTKCGNLKHLFTPELVKYH 551

Query: 514 CPNLEEITVQQCSQMEELLTSGE--DSGEGSTNTTTDTISVPRLKILWLESLPKLESIWK 687
             NL+ I +  CSQME+++ + E  + GE            P L+ L L +LP+L+SIWK
Sbjct: 552 LQNLQTIYLHDCSQMEDIIVAAEVEEEGEDINEMNNLLFYFPNLQSLELRNLPELKSIWK 611

Query: 688 GVMACDCLQEVVVDECVQLKKLP 756
           G M C+ LQ+++V +C  L++LP
Sbjct: 612 GTMTCNLLQQLIVLDCPNLRRLP 634


>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr resistance
            protein [Populus trichocarpa]
          Length = 1075

 Score = 85.1 bits (209), Expect = 2e-14
 Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
 Frame = +1

Query: 232  QHFQNLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICL---DEV 402
            +H  +L+ + ++ C  +E L    +       SS   F +   + L +L+  C+    E 
Sbjct: 851  KHATSLKSLGMWECDGIECLASMSE-------SSTDIFESLESLYLKTLKNFCVFITREG 903

Query: 403  NLKRLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGE 582
                 W        L+K+ + +C  +K LFS   L +  NLE I V  C QMEE++   E
Sbjct: 904  AAPPSWQSNGTFSHLKKVTIGECPSMKNLFSLDLLPNLTNLEVIEVDDCDQMEEIIAI-E 962

Query: 583  DSGEG------STNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQL 744
            D  EG      S+++     S+P LK+L L +LP+L+SI+ G + CD LQE++V  C  L
Sbjct: 963  DEEEGMMVEDSSSSSHYAVTSLPNLKVLKLSNLPELKSIFHGEVICDSLQEIIVVNCPNL 1022

Query: 745  KKLPQFSVKHKFSPLTLKEI 804
            K++      H      L++I
Sbjct: 1023 KRISLSHRNHANGQTPLRKI 1042


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