BLASTX nr result
ID: Coptis25_contig00025658
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00025658
(804 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002325700.1| BED finger-nbs-lrr resistance protein [Popul... 102 8e-20
ref|XP_002325701.1| nbs-lrr resistance protein [Populus trichoca... 92 2e-16
ref|XP_002325306.1| BED finger-nbs-lrr resistance protein [Popul... 87 3e-15
emb|CBI20133.3| unnamed protein product [Vitis vinifera] 86 7e-15
ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Popul... 85 2e-14
>ref|XP_002325700.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
gi|222862575|gb|EEF00082.1| BED finger-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 1159
Score = 102 bits (255), Expect = 8e-20
Identities = 79/273 (28%), Positives = 127/273 (46%), Gaps = 24/273 (8%)
Frame = +1
Query: 10 CPNVKFLFSSKLFKQLQKLAEVRVTDCGKFKEIIIAT-EDEETQGEESCTSAPXXXXXXX 186
C ++K LF L L L + V C K +EII+ T DEE+ + P
Sbjct: 840 CSSMKKLFPLVLLPNLVNLENISVFGCEKMEEIIVGTRSDEESSSNSTEFKLPKLRYLAL 899
Query: 187 XXXXXXXXXFSRRSVQHFQNLELISVYNCGELEELME-----------------GKQEKS 315
S + + +L+ I V NC +E L+ GK E+
Sbjct: 900 EDLPELKRICSAKLI--CDSLQQIEVRNCKSMESLVPSSWICLVNLERIIVTGCGKMEEI 957
Query: 316 EGSCSSNSDFNNSTIITLPSLQFI-CLDEVNLKRLWSGIVVCKSLRKLEVYDCHELKTLF 492
G ++ + +N+T LP L+ + +D LKR+ S ++C SLR++EV +C+ ++ L
Sbjct: 958 IGGTRADEESSNNTEFKLPKLRSLESVDLPELKRICSAKLICDSLREIEVRNCNSMEILV 1017
Query: 493 STKSLQHCPNLEEITVQQCSQMEELLTSGE-----DSGEGSTNTTTDTISVPRLKILWLE 657
+ S NLE I V C +M+E++ D GE S+N T+ +P+L+ L L
Sbjct: 1018 PS-SWICLVNLERIIVAGCGKMDEIICGTRSDEEGDIGEESSNNNTE-FKLPKLRSLLLF 1075
Query: 658 SLPKLESIWKGVMACDCLQEVVVDECVQLKKLP 756
LP+L+SI + CD L + + C LK++P
Sbjct: 1076 ELPELKSICSAKLICDSLGTISIRNCENLKRMP 1108
Score = 67.4 bits (163), Expect = 4e-09
Identities = 46/175 (26%), Positives = 79/175 (45%)
Frame = +1
Query: 229 VQHFQNLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEVNL 408
++H LE+I + +C +E L+ S C S + ++
Sbjct: 789 IEHSIELEVIHIEDCNSMESLIS-----SSWFCPSPTPLSS------------------- 824
Query: 409 KRLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGEDS 588
++G+ L++ C +K LF L + NLE I+V C +MEE++
Sbjct: 825 ---YNGVF--SGLKEFNCSGCSSMKKLFPLVLLPNLVNLENISVFGCEKMEEIIVGTRSD 879
Query: 589 GEGSTNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKL 753
E S+N+T +P+L+ L LE LP+L+ I + CD LQ++ V C ++ L
Sbjct: 880 EESSSNST--EFKLPKLRYLALEDLPELKRICSAKLICDSLQQIEVRNCKSMESL 932
>ref|XP_002325701.1| nbs-lrr resistance protein [Populus trichocarpa]
gi|222862576|gb|EEF00083.1| nbs-lrr resistance protein
[Populus trichocarpa]
Length = 1031
Score = 91.7 bits (226), Expect = 2e-16
Identities = 56/172 (32%), Positives = 97/172 (56%), Gaps = 1/172 (0%)
Frame = +1
Query: 244 NLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEV-NLKRLW 420
NLE I+V C ++EE++ G + E S +N+T LP L+ + L + LK +
Sbjct: 849 NLEKITVSACKKMEEIIGGTRSDEESS-------SNNTEFKLPKLRSLALFNLPELKSIC 901
Query: 421 SGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGEDSGEGS 600
S + C SL+++EV++C+ ++ L + + NLE+ITV C +M+E++ E S
Sbjct: 902 SAKLTCDSLQQIEVWNCNSMEILVPSSWIS-LVNLEKITVSACKKMKEIIGGTRSDEESS 960
Query: 601 TNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKLP 756
+N T +P+L+ L L LP+L+ I + CD L+ + V +C +LK++P
Sbjct: 961 SNNTE--FKLPKLRSLALSWLPELKRICSAKLICDSLRMIEVYKCQKLKRMP 1010
Score = 90.9 bits (224), Expect = 3e-16
Identities = 57/171 (33%), Positives = 95/171 (55%), Gaps = 1/171 (0%)
Frame = +1
Query: 244 NLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEV-NLKRLW 420
NLE I+V C ++EE++ G++ E S ST LP L+ + L + LK +
Sbjct: 766 NLEKITVRGCEKMEEIIGGRRSDEESS---------STEFKLPKLRSLALFNLPELKSIC 816
Query: 421 SGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGEDSGEGS 600
S + C SL+++EV++C+ ++ L + + NLE+ITV C +MEE++ E S
Sbjct: 817 SAKLTCDSLQQIEVWNCNSMEILVPSSWIS-LVNLEKITVSACKKMEEIIGGTRSDEESS 875
Query: 601 TNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKL 753
+N T +P+L+ L L +LP+L+SI + CD LQ++ V C ++ L
Sbjct: 876 SNNT--EFKLPKLRSLALFNLPELKSICSAKLTCDSLQQIEVWNCNSMEIL 924
Score = 71.2 bits (173), Expect = 2e-10
Identities = 42/116 (36%), Positives = 71/116 (61%)
Frame = +1
Query: 406 LKRLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGED 585
LK + S + C SL+K+EV++C+ ++ L + + NLE+ITV+ C +MEE++ G
Sbjct: 729 LKNICSAKLTCDSLQKIEVWNCNSMEILVPSSWIS-LVNLEKITVRGCEKMEEII-GGRR 786
Query: 586 SGEGSTNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKL 753
S E S++T +P+L+ L L +LP+L+SI + CD LQ++ V C ++ L
Sbjct: 787 SDEESSSTE---FKLPKLRSLALFNLPELKSICSAKLTCDSLQQIEVWNCNSMEIL 839
>ref|XP_002325306.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
gi|222862181|gb|EEE99687.1| BED finger-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 1570
Score = 87.4 bits (215), Expect = 3e-15
Identities = 81/291 (27%), Positives = 127/291 (43%), Gaps = 36/291 (12%)
Frame = +1
Query: 10 CPNVKFLFSSKLFKQLQKLAEVRVTDCGKFKEII--IATEDEETQGEESCT-----SAPX 168
C +K LF L L L + V +C K +EII +++E GEES P
Sbjct: 907 CKGMKKLFPPVLLPYLVNLERIDVKECEKMEEIIGGAISDEEGDMGEESSVRNTEFKLPK 966
Query: 169 XXXXXXXXXXXXXXXFSRR----SVQHFQ-------------------NLELISVYNCGE 279
S + S+Q + NLE I V C +
Sbjct: 967 LRELHLGDLPELKSICSAKLICDSLQKIEVRNCSIREILVPSSWIGLVNLEEIVVEGCEK 1026
Query: 280 LEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEV-NLKRLWSGIVVCKSLRKL 456
+EE++ G + EG S N T LP L+ + L ++ LK + S ++C SLR +
Sbjct: 1027 MEEIIGGARSDEEGVMGEESSIRN-TEFKLPKLRELHLGDLPELKSICSAKLICDSLRVI 1085
Query: 457 EVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGE-----DSGEGSTNTTTDT 621
EV +C ++ L + + H L+ I V++C +MEE++ D GE S+ T+
Sbjct: 1086 EVRNCSIIEVLVPSSWI-HLVKLKRIDVKECEKMEEIIGGARSDEEGDMGEESSVRNTE- 1143
Query: 622 ISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKLPQFSVKH 774
+P+L+ L L LP+L+SI + CD L+ + V C ++ L S H
Sbjct: 1144 FKLPKLRELHLGDLPELKSICSAKLICDSLRVIEVRNCSIIEVLVPSSWIH 1194
Score = 85.9 bits (211), Expect = 1e-14
Identities = 61/193 (31%), Positives = 96/193 (49%), Gaps = 7/193 (3%)
Frame = +1
Query: 244 NLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEV-NLKRLW 420
NLE I V C ++EE++ G EG S N T LP L+ + L ++ LK +
Sbjct: 924 NLERIDVKECEKMEEIIGGAISDEEGDMGEESSVRN-TEFKLPKLRELHLGDLPELKSIC 982
Query: 421 SGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGEDSGEG- 597
S ++C SL+K+EV +C ++ + S NLEEI V+ C +MEE++ EG
Sbjct: 983 SAKLICDSLQKIEVRNC-SIREILVPSSWIGLVNLEEIVVEGCEKMEEIIGGARSDEEGV 1041
Query: 598 ---STNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKLPQFSV 768
++ +P+L+ L L LP+L+SI + CD L+ + V C ++ L S
Sbjct: 1042 MGEESSIRNTEFKLPKLRELHLGDLPELKSICSAKLICDSLRVIEVRNCSIIEVLVPSSW 1101
Query: 769 KH--KFSPLTLKE 801
H K + +KE
Sbjct: 1102 IHLVKLKRIDVKE 1114
Score = 85.1 bits (209), Expect = 2e-14
Identities = 55/175 (31%), Positives = 94/175 (53%), Gaps = 4/175 (2%)
Frame = +1
Query: 244 NLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEV-NLKRLW 420
NLE I V C ++EE++ G + EG S N T LP L+ + L + LK +
Sbjct: 1348 NLEEIVVEGCEKMEEIIGGARSDEEGVMGEESSIRN-TEFKLPKLRQLHLKNLLELKSIC 1406
Query: 421 SGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELL---TSGEDSG 591
S ++C SL +EV++C ++ + S L+ I V +C +MEE++ S E+
Sbjct: 1407 SAKLICDSLEVIEVWNC-SIREILVPSSWIRLVKLKVIVVGRCVKMEEIIGGTRSDEEGV 1465
Query: 592 EGSTNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQLKKLP 756
G ++++ ++ P+LK L L LP+L SI + CD ++ + + EC +LK++P
Sbjct: 1466 MGEESSSSTELNFPQLKTLKLIWLPELRSICSAKLICDSMKLIHIRECQKLKRMP 1520
Score = 79.0 bits (193), Expect = 1e-12
Identities = 54/173 (31%), Positives = 92/173 (53%), Gaps = 5/173 (2%)
Frame = +1
Query: 235 HFQNLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEV-NLK 411
H L+ I V C ++EE++ G + EG S N T LP L+ + L ++ LK
Sbjct: 1103 HLVKLKRIDVKECEKMEEIIGGARSDEEGDMGEESSVRN-TEFKLPKLRELHLGDLPELK 1161
Query: 412 RLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELL---TSGE 582
+ S ++C SLR +EV +C ++ L + + H NL+ I V+ C +MEE++ S E
Sbjct: 1162 SICSAKLICDSLRVIEVRNCSIIEVLVPSSWI-HLVNLKRIDVKGCEKMEEIIGGAISDE 1220
Query: 583 DSGEGSTNTTTDT-ISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECV 738
+ G ++ +T +P+L+ L L L +L+SI + CD L+ V ++E +
Sbjct: 1221 EGVMGEESSIRNTEFKLPKLRELHLRDLLELKSICSAKLICDSLKCVKMEEII 1273
Score = 64.3 bits (155), Expect = 3e-08
Identities = 51/174 (29%), Positives = 81/174 (46%), Gaps = 4/174 (2%)
Frame = +1
Query: 226 SVQHFQNLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICLDEVN 405
S+++ LE I + NC +E L+ S CS+ LP C
Sbjct: 853 SLKYATELEYIKILNCNSMESLVS-----SSWLCSA----------PLPQPSPSC----- 892
Query: 406 LKRLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELL---TS 576
++SG L++L C +K LF L + NLE I V++C +MEE++ S
Sbjct: 893 -NGIFSG------LKRLYCSGCKGMKKLFPPVLLPYLVNLERIDVKECEKMEEIIGGAIS 945
Query: 577 GEDSGEGSTNTTTDT-ISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDEC 735
E+ G ++ +T +P+L+ L L LP+L+SI + CD LQ++ V C
Sbjct: 946 DEEGDMGEESSVRNTEFKLPKLRELHLGDLPELKSICSAKLICDSLQKIEVRNC 999
Score = 58.5 bits (140), Expect = 2e-06
Identities = 51/168 (30%), Positives = 73/168 (43%), Gaps = 1/168 (0%)
Frame = +1
Query: 235 HFQNLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICL-DEVNLK 411
H NL+ I V C ++EE++ G EG S N T LP L+ + L D + LK
Sbjct: 1194 HLVNLKRIDVKGCEKMEEIIGGAISDEEGVMGEESSIRN-TEFKLPKLRELHLRDLLELK 1252
Query: 412 RLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGEDSG 591
+ S ++C SL+ C +EEI S E D G
Sbjct: 1253 SICSAKLICDSLK---------------------CVKMEEIIGGTRSDEEG------DMG 1285
Query: 592 EGSTNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDEC 735
E S+ T+ +P+L+ L L LP+L+SI + CD LQ + V C
Sbjct: 1286 EESSIRNTE-FKLPKLRELHLGDLPELKSICSAKLICDSLQVIEVRNC 1332
>emb|CBI20133.3| unnamed protein product [Vitis vinifera]
Length = 656
Score = 86.3 bits (212), Expect = 7e-15
Identities = 52/143 (36%), Positives = 80/143 (55%), Gaps = 3/143 (2%)
Frame = +1
Query: 337 SDFNNSTIITLPSLQFICLDEVNLKRLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQ-H 513
+ NN + LP+L V K + IV C SL+ L+V C LK LF+ + ++ H
Sbjct: 498 ASLNNLYLNELPNLS------VFFKFQPTDIVSCFSLKHLQVTKCGNLKHLFTPELVKYH 551
Query: 514 CPNLEEITVQQCSQMEELLTSGE--DSGEGSTNTTTDTISVPRLKILWLESLPKLESIWK 687
NL+ I + CSQME+++ + E + GE P L+ L L +LP+L+SIWK
Sbjct: 552 LQNLQTIYLHDCSQMEDIIVAAEVEEEGEDINEMNNLLFYFPNLQSLELRNLPELKSIWK 611
Query: 688 GVMACDCLQEVVVDECVQLKKLP 756
G M C+ LQ+++V +C L++LP
Sbjct: 612 GTMTCNLLQQLIVLDCPNLRRLP 634
>ref|XP_002329155.1| BED finger-nbs-lrr resistance protein [Populus trichocarpa]
gi|222869824|gb|EEF06955.1| BED finger-nbs-lrr resistance
protein [Populus trichocarpa]
Length = 1075
Score = 85.1 bits (209), Expect = 2e-14
Identities = 60/200 (30%), Positives = 97/200 (48%), Gaps = 9/200 (4%)
Frame = +1
Query: 232 QHFQNLELISVYNCGELEELMEGKQEKSEGSCSSNSDFNNSTIITLPSLQFICL---DEV 402
+H +L+ + ++ C +E L + SS F + + L +L+ C+ E
Sbjct: 851 KHATSLKSLGMWECDGIECLASMSE-------SSTDIFESLESLYLKTLKNFCVFITREG 903
Query: 403 NLKRLWSGIVVCKSLRKLEVYDCHELKTLFSTKSLQHCPNLEEITVQQCSQMEELLTSGE 582
W L+K+ + +C +K LFS L + NLE I V C QMEE++ E
Sbjct: 904 AAPPSWQSNGTFSHLKKVTIGECPSMKNLFSLDLLPNLTNLEVIEVDDCDQMEEIIAI-E 962
Query: 583 DSGEG------STNTTTDTISVPRLKILWLESLPKLESIWKGVMACDCLQEVVVDECVQL 744
D EG S+++ S+P LK+L L +LP+L+SI+ G + CD LQE++V C L
Sbjct: 963 DEEEGMMVEDSSSSSHYAVTSLPNLKVLKLSNLPELKSIFHGEVICDSLQEIIVVNCPNL 1022
Query: 745 KKLPQFSVKHKFSPLTLKEI 804
K++ H L++I
Sbjct: 1023 KRISLSHRNHANGQTPLRKI 1042