BLASTX nr result

ID: Coptis25_contig00025656 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025656
         (241 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003598545.1| Cc-nbs-lrr resistance protein [Medicago trun...    62   4e-08
ref|XP_002309757.1| cc-nbs-lrr resistance protein [Populus trich...    62   5e-08
ref|XP_003598801.1| Cc-nbs-lrr resistance protein [Medicago trun...    61   8e-08
gb|ACZ74671.1| CNL-B21 [Phaseolus vulgaris]                            61   8e-08
ref|XP_003598814.1| NBS resistance protein [Medicago truncatula]...    61   1e-07

>ref|XP_003598545.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
            gi|358344304|ref|XP_003636230.1| Cc-nbs-lrr resistance
            protein [Medicago truncatula] gi|355487593|gb|AES68796.1|
            Cc-nbs-lrr resistance protein [Medicago truncatula]
            gi|355502165|gb|AES83368.1| Cc-nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 1114

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 30/49 (61%), Positives = 33/49 (67%)
 Frame = -2

Query: 147  IRLCPSLESFPMKGLPNSLQHLVIIDCPLLKEFCQKEQEEQWRKLVHIP 1
            I+ CPSLE  P KGLPNSL  L I  CPLLKE  QKE+ E W  + HIP
Sbjct: 1060 IQHCPSLERLPEKGLPNSLSQLFIHKCPLLKEQYQKEEGECWHTICHIP 1108


>ref|XP_002309757.1| cc-nbs-lrr resistance protein [Populus trichocarpa]
            gi|222852660|gb|EEE90207.1| cc-nbs-lrr resistance protein
            [Populus trichocarpa]
          Length = 1302

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = -2

Query: 138  CPSLESFPMKGLPNSLQHLVIIDCPLLKEFCQKEQEEQWRKLVHIP 1
            CP LES P +GLP+SL++L I DCPLL++ C+KE  E W K+ HIP
Sbjct: 1247 CPKLESMPEQGLPSSLEYLEIGDCPLLEKRCRKEIGEDWPKISHIP 1292


>ref|XP_003598801.1| Cc-nbs-lrr resistance protein [Medicago truncatula]
            gi|355487849|gb|AES69052.1| Cc-nbs-lrr resistance protein
            [Medicago truncatula]
          Length = 1150

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 27/46 (58%), Positives = 33/46 (71%)
 Frame = -2

Query: 138  CPSLESFPMKGLPNSLQHLVIIDCPLLKEFCQKEQEEQWRKLVHIP 1
            CP LES P +GLP+SL  L I DCPL+K+  QKEQ E+W  + HIP
Sbjct: 1100 CPCLESLPEEGLPSSLSTLSIHDCPLIKQLYQKEQGERWHTISHIP 1145


>gb|ACZ74671.1| CNL-B21 [Phaseolus vulgaris]
          Length = 1133

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 31/74 (41%), Positives = 38/74 (51%)
 Frame = -2

Query: 225  KLNIFDCXXXXXXXXXXXXXXXXXLEIRLCPSLESFPMKGLPNSLQHLVIIDCPLLKEFC 46
            KL I+DC                   I  CP+L+  P +GLP S+  LVI+DCPLLKE C
Sbjct: 1055 KLGIYDCPNLKKMHYKGLCHLSSLTLIN-CPNLQCLPEEGLPKSISSLVILDCPLLKERC 1113

Query: 45   QKEQEEQWRKLVHI 4
            Q    E W K+ HI
Sbjct: 1114 QNPDGEDWGKIAHI 1127


>ref|XP_003598814.1| NBS resistance protein [Medicago truncatula]
            gi|355487862|gb|AES69065.1| NBS resistance protein
            [Medicago truncatula]
          Length = 1136

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 28/46 (60%), Positives = 32/46 (69%)
 Frame = -2

Query: 138  CPSLESFPMKGLPNSLQHLVIIDCPLLKEFCQKEQEEQWRKLVHIP 1
            CP LES P +GLP SL  L I DCPLLK+  QKEQ E+W  + HIP
Sbjct: 1086 CPCLESLPEEGLPISLSTLSIHDCPLLKQLYQKEQGERWHTICHIP 1131


Top