BLASTX nr result

ID: Coptis25_contig00025655 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025655
         (804 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522336.1| conserved hypothetical protein [Ricinus comm...   189   6e-46
ref|XP_002270797.1| PREDICTED: reticulon-like protein B13 [Vitis...   187   2e-45
ref|XP_002310752.1| predicted protein [Populus trichocarpa] gi|2...   173   5e-41
ref|NP_001237302.1| 24 kDa seed maturation protein [Glycine max]...   167   2e-39
gb|ACU18528.1| unknown [Glycine max]                                  167   2e-39

>ref|XP_002522336.1| conserved hypothetical protein [Ricinus communis]
           gi|223538414|gb|EEF40020.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 206

 Score =  189 bits (480), Expect = 6e-46
 Identities = 86/176 (48%), Positives = 128/176 (72%)
 Frame = -2

Query: 776 NNNIVRDIMLWRKKRVSASILAIATATWVALEVYQFNFLTIASWASMAIVVLLFFWGNLA 597
           + + V+DI+LWR+K++S  +L +AT TWV L+VY+FNF+T+ASW +M IV  LF +GNL 
Sbjct: 11  STDTVKDIVLWRRKKLSLLVLLVATVTWVLLDVYEFNFITVASWLAMLIVTSLFLYGNLV 70

Query: 596 RLLGRQEPNVPDSIASEQTTLKTAHTLKGLLEDTLRWMVRKGVTSEWYEFVGIVAALYVL 417
           RL  ++EP + +   SE+TT +TA +++G++E+ +RWM      SEW+ F  +V  L++L
Sbjct: 71  RLFRKEEPKISNWKISEETTTETAKSVRGMIEEGIRWMFHVSAESEWFIFARVVTVLWLL 130

Query: 416 SKIGSWFDLLTLLYIGVVMGLTVPLIYEKYEDKIKGTWERMKVQCRRLHTKFDEKV 249
           S +GS+FD LTLLY+G VMG++VP+IY K E+KIK   E MK++ RR +   DEKV
Sbjct: 131 SYVGSFFDFLTLLYVGTVMGMSVPVIYVKNEEKIKRCEEWMKMKARRFYEMMDEKV 186


>ref|XP_002270797.1| PREDICTED: reticulon-like protein B13 [Vitis vinifera]
           gi|297735839|emb|CBI18559.3| unnamed protein product
           [Vitis vinifera]
          Length = 214

 Score =  187 bits (475), Expect = 2e-45
 Identities = 87/174 (50%), Positives = 121/174 (69%)
 Frame = -2

Query: 770 NIVRDIMLWRKKRVSASILAIATATWVALEVYQFNFLTIASWASMAIVVLLFFWGNLARL 591
           ++ RDI+LWR+K++S  +  I+TATWV +EVYQFN +TI  W  MA+V  LF WGN+ RL
Sbjct: 13  DLARDILLWRRKKMSVMVFFISTATWVLMEVYQFNSITIVCWVGMAVVTSLFIWGNMCRL 72

Query: 590 LGRQEPNVPDSIASEQTTLKTAHTLKGLLEDTLRWMVRKGVTSEWYEFVGIVAALYVLSK 411
           LG++ P++     +EQ+T +     +  +E+ +RWM R G  SEWY F G+V  L++LS 
Sbjct: 73  LGKEPPSLSGLEITEQSTTEMTILFRESIEEAVRWMFRVGAESEWYVFAGVVTGLWILSI 132

Query: 410 IGSWFDLLTLLYIGVVMGLTVPLIYEKYEDKIKGTWERMKVQCRRLHTKFDEKV 249
           +GS  DLLTL YIG++M +T+P+IY KYEDKIK   ER+KV  R+L    DEKV
Sbjct: 133 VGSCMDLLTLAYIGIMMSVTIPVIYIKYEDKIKRYGERVKVHWRKLVEIVDEKV 186


>ref|XP_002310752.1| predicted protein [Populus trichocarpa] gi|222853655|gb|EEE91202.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  173 bits (438), Expect = 5e-41
 Identities = 84/173 (48%), Positives = 124/173 (71%)
 Frame = -2

Query: 764 VRDIMLWRKKRVSASILAIATATWVALEVYQFNFLTIASWASMAIVVLLFFWGNLARLLG 585
           VRD+ LWR+K++S  +L ++TATWV+L+VYQFN +T+ASWA+M  V  LF +GN+AR L 
Sbjct: 15  VRDVFLWRRKKLSLLVLLVSTATWVSLDVYQFNLITVASWAAMFAVTSLFLYGNIARFLR 74

Query: 584 RQEPNVPDSIASEQTTLKTAHTLKGLLEDTLRWMVRKGVTSEWYEFVGIVAALYVLSKIG 405
           ++EP++     SEQT ++ A +++  +E+ +RWM       E + F  +VAAL +LS +G
Sbjct: 75  KEEPDLSGLEISEQTAIEAARSVRQSIEEGVRWMCHVSAERELFLFARVVAALCLLSYVG 134

Query: 404 SWFDLLTLLYIGVVMGLTVPLIYEKYEDKIKGTWERMKVQCRRLHTKFDEKVL 246
           S++D L+LLYI +V+G+TVP+IY K EDKIK   E M++Q RRL    DEKV+
Sbjct: 135 SFWDSLSLLYIDIVVGMTVPVIYVKNEDKIKRYEEWMRMQARRLCDMVDEKVV 187


>ref|NP_001237302.1| 24 kDa seed maturation protein [Glycine max]
           gi|4102690|gb|AAD01540.1| 24 kDa seed maturation protein
           [Glycine max]
          Length = 212

 Score =  167 bits (423), Expect = 2e-39
 Identities = 78/177 (44%), Positives = 120/177 (67%)
 Frame = -2

Query: 776 NNNIVRDIMLWRKKRVSASILAIATATWVALEVYQFNFLTIASWASMAIVVLLFFWGNLA 597
           +N IV+D++LWR+K+++ S+L  ATA WV +EV++FNFLT+ SW ++  +  +F + N+ 
Sbjct: 22  DNGIVKDVVLWRRKKINISVLVAATAAWVLMEVFEFNFLTLISWVAILGLASIFLYANML 81

Query: 596 RLLGRQEPNVPDSIASEQTTLKTAHTLKGLLEDTLRWMVRKGVTSEWYEFVGIVAALYVL 417
           RLLG++ PN+     SE+TT + AHT++  +E+ +RW+   G   EW  FVG VA L  L
Sbjct: 82  RLLGKEPPNLLGLEVSEKTTTRIAHTVRAWIEEGIRWLFLVGAEKEWPVFVGAVAGLLSL 141

Query: 416 SKIGSWFDLLTLLYIGVVMGLTVPLIYEKYEDKIKGTWERMKVQCRRLHTKFDEKVL 246
           S +GS  DLLTL+Y+G ++G+ VPL Y K EDKIK   E ++ + +R +   DEK +
Sbjct: 142 SYLGSCMDLLTLVYMGTLVGMAVPLTYVKNEDKIKRFVEWLREKHKRYYQIIDEKTI 198


>gb|ACU18528.1| unknown [Glycine max]
          Length = 212

 Score =  167 bits (423), Expect = 2e-39
 Identities = 78/177 (44%), Positives = 120/177 (67%)
 Frame = -2

Query: 776 NNNIVRDIMLWRKKRVSASILAIATATWVALEVYQFNFLTIASWASMAIVVLLFFWGNLA 597
           +N IV+D++LWR+K+++ S+L  ATA WV +EV++FNFLT+ SW ++  +  +F + N+ 
Sbjct: 22  DNGIVKDVVLWRRKKINISVLVAATAAWVLMEVFEFNFLTLISWVAILGLASIFLYANML 81

Query: 596 RLLGRQEPNVPDSIASEQTTLKTAHTLKGLLEDTLRWMVRKGVTSEWYEFVGIVAALYVL 417
           RLLG++ PN+     SE+TT + AHT++  +E+ +RW+   G   EW  FVG VA L  L
Sbjct: 82  RLLGKEPPNLLGLEVSEKTTTRIAHTVRAWIEEGIRWLFLVGAEKEWPVFVGAVAGLLSL 141

Query: 416 SKIGSWFDLLTLLYIGVVMGLTVPLIYEKYEDKIKGTWERMKVQCRRLHTKFDEKVL 246
           S +GS  DLLTL+Y+G ++G+ VPL Y K EDKIK   E ++ + +R +   DEK +
Sbjct: 142 SYLGSCMDLLTLVYMGTLVGMAVPLTYVKNEDKIKRFVEWLREKHKRYYQIIDEKTI 198


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