BLASTX nr result
ID: Coptis25_contig00025647
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025647 (427 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300362.1| multidrug resistance protein ABC transporter... 241 4e-62 ref|XP_002303920.1| multidrug resistance protein ABC transporter... 241 4e-62 ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3... 236 1e-60 emb|CBI26749.3| unnamed protein product [Vitis vinifera] 236 1e-60 emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera] 236 1e-60 >ref|XP_002300362.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222847620|gb|EEE85167.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1488 Score = 241 bits (615), Expect = 4e-62 Identities = 115/142 (80%), Positives = 129/142 (90%) Frame = +1 Query: 1 PLVIEAHRPDHNWPSHGDVAIHNLQVRYASYMPLILQGLTCTFPGGKKSGIVGRTGSGKS 180 PL+IEA RP+ +WPSHG+V I+NLQVRYA +MPL+L+GLTCTFPGG K+GIVGRTGSGKS Sbjct: 1222 PLIIEASRPNRSWPSHGEVEINNLQVRYAPHMPLVLRGLTCTFPGGMKTGIVGRTGSGKS 1281 Query: 181 TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRQKLSINSQDPTMFEGTVISNLDPLEEY 360 TLIQTLFR+VEP AG+I+ID DISLIGLHDLR +LSI QDPTMFEGTV SNLDPLEEY Sbjct: 1282 TLIQTLFRIVEPAAGRIMIDDIDISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1341 Query: 361 KDEEIWEALDKCQLGDEVRKKE 426 DE+IWEALDKCQLGDEVRKKE Sbjct: 1342 TDEQIWEALDKCQLGDEVRKKE 1363 >ref|XP_002303920.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] gi|222841352|gb|EEE78899.1| multidrug resistance protein ABC transporter family [Populus trichocarpa] Length = 1305 Score = 241 bits (615), Expect = 4e-62 Identities = 115/142 (80%), Positives = 127/142 (89%) Frame = +1 Query: 1 PLVIEAHRPDHNWPSHGDVAIHNLQVRYASYMPLILQGLTCTFPGGKKSGIVGRTGSGKS 180 PLVIEA+RP H+WPSHG++ I NLQVRYA +MPL+L+GL+CTFPGGKK+GIVGRTGSGKS Sbjct: 1036 PLVIEANRPGHSWPSHGEIDIDNLQVRYAPHMPLVLRGLSCTFPGGKKTGIVGRTGSGKS 1095 Query: 181 TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRQKLSINSQDPTMFEGTVISNLDPLEEY 360 TLIQ LFR VEP AGQI+ID DISLIGLHDLR +LSI QDPTMFEGTV SNLDPLEEY Sbjct: 1096 TLIQALFRTVEPAAGQIMIDSIDISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1155 Query: 361 KDEEIWEALDKCQLGDEVRKKE 426 DE+IWE LDKCQLGDEVRKKE Sbjct: 1156 TDEQIWEVLDKCQLGDEVRKKE 1177 >ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera] Length = 1485 Score = 236 bits (602), Expect = 1e-60 Identities = 112/142 (78%), Positives = 129/142 (90%) Frame = +1 Query: 1 PLVIEAHRPDHNWPSHGDVAIHNLQVRYASYMPLILQGLTCTFPGGKKSGIVGRTGSGKS 180 PLV+E ++P +WPSHG+V I +LQVRYA ++PL+L+GLTC FPGG K+GIVGRTGSGKS Sbjct: 1224 PLVMEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSGKS 1283 Query: 181 TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRQKLSINSQDPTMFEGTVISNLDPLEEY 360 TLIQTLFR+VEPTAG+I+IDGT+ISLIGLHDLR +LSI QDPTMFEGTV SNLDPLEEY Sbjct: 1284 TLIQTLFRIVEPTAGEIMIDGTNISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1343 Query: 361 KDEEIWEALDKCQLGDEVRKKE 426 DE+IWEALDKCQLGDEVRKKE Sbjct: 1344 SDEQIWEALDKCQLGDEVRKKE 1365 >emb|CBI26749.3| unnamed protein product [Vitis vinifera] Length = 1269 Score = 236 bits (602), Expect = 1e-60 Identities = 112/142 (78%), Positives = 129/142 (90%) Frame = +1 Query: 1 PLVIEAHRPDHNWPSHGDVAIHNLQVRYASYMPLILQGLTCTFPGGKKSGIVGRTGSGKS 180 PLV+E ++P +WPSHG+V I +LQVRYA ++PL+L+GLTC FPGG K+GIVGRTGSGKS Sbjct: 1008 PLVMEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSGKS 1067 Query: 181 TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRQKLSINSQDPTMFEGTVISNLDPLEEY 360 TLIQTLFR+VEPTAG+I+IDGT+ISLIGLHDLR +LSI QDPTMFEGTV SNLDPLEEY Sbjct: 1068 TLIQTLFRIVEPTAGEIMIDGTNISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1127 Query: 361 KDEEIWEALDKCQLGDEVRKKE 426 DE+IWEALDKCQLGDEVRKKE Sbjct: 1128 SDEQIWEALDKCQLGDEVRKKE 1149 >emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera] Length = 1458 Score = 236 bits (602), Expect = 1e-60 Identities = 112/142 (78%), Positives = 129/142 (90%) Frame = +1 Query: 1 PLVIEAHRPDHNWPSHGDVAIHNLQVRYASYMPLILQGLTCTFPGGKKSGIVGRTGSGKS 180 PLV+E ++P +WPSHG+V I +LQVRYA ++PL+L+GLTC FPGG K+GIVGRTGSGKS Sbjct: 1197 PLVMEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSGKS 1256 Query: 181 TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRQKLSINSQDPTMFEGTVISNLDPLEEY 360 TLIQTLFR+VEPTAG+I+IDGT+ISLIGLHDLR +LSI QDPTMFEGTV SNLDPLEEY Sbjct: 1257 TLIQTLFRIVEPTAGEIMIDGTNISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1316 Query: 361 KDEEIWEALDKCQLGDEVRKKE 426 DE+IWEALDKCQLGDEVRKKE Sbjct: 1317 SDEQIWEALDKCQLGDEVRKKE 1338