BLASTX nr result

ID: Coptis25_contig00025647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025647
         (427 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300362.1| multidrug resistance protein ABC transporter...   241   4e-62
ref|XP_002303920.1| multidrug resistance protein ABC transporter...   241   4e-62
ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3...   236   1e-60
emb|CBI26749.3| unnamed protein product [Vitis vinifera]              236   1e-60
emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]   236   1e-60

>ref|XP_002300362.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222847620|gb|EEE85167.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1488

 Score =  241 bits (615), Expect = 4e-62
 Identities = 115/142 (80%), Positives = 129/142 (90%)
 Frame = +1

Query: 1    PLVIEAHRPDHNWPSHGDVAIHNLQVRYASYMPLILQGLTCTFPGGKKSGIVGRTGSGKS 180
            PL+IEA RP+ +WPSHG+V I+NLQVRYA +MPL+L+GLTCTFPGG K+GIVGRTGSGKS
Sbjct: 1222 PLIIEASRPNRSWPSHGEVEINNLQVRYAPHMPLVLRGLTCTFPGGMKTGIVGRTGSGKS 1281

Query: 181  TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRQKLSINSQDPTMFEGTVISNLDPLEEY 360
            TLIQTLFR+VEP AG+I+ID  DISLIGLHDLR +LSI  QDPTMFEGTV SNLDPLEEY
Sbjct: 1282 TLIQTLFRIVEPAAGRIMIDDIDISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1341

Query: 361  KDEEIWEALDKCQLGDEVRKKE 426
             DE+IWEALDKCQLGDEVRKKE
Sbjct: 1342 TDEQIWEALDKCQLGDEVRKKE 1363


>ref|XP_002303920.1| multidrug resistance protein ABC transporter family [Populus
            trichocarpa] gi|222841352|gb|EEE78899.1| multidrug
            resistance protein ABC transporter family [Populus
            trichocarpa]
          Length = 1305

 Score =  241 bits (615), Expect = 4e-62
 Identities = 115/142 (80%), Positives = 127/142 (89%)
 Frame = +1

Query: 1    PLVIEAHRPDHNWPSHGDVAIHNLQVRYASYMPLILQGLTCTFPGGKKSGIVGRTGSGKS 180
            PLVIEA+RP H+WPSHG++ I NLQVRYA +MPL+L+GL+CTFPGGKK+GIVGRTGSGKS
Sbjct: 1036 PLVIEANRPGHSWPSHGEIDIDNLQVRYAPHMPLVLRGLSCTFPGGKKTGIVGRTGSGKS 1095

Query: 181  TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRQKLSINSQDPTMFEGTVISNLDPLEEY 360
            TLIQ LFR VEP AGQI+ID  DISLIGLHDLR +LSI  QDPTMFEGTV SNLDPLEEY
Sbjct: 1096 TLIQALFRTVEPAAGQIMIDSIDISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1155

Query: 361  KDEEIWEALDKCQLGDEVRKKE 426
             DE+IWE LDKCQLGDEVRKKE
Sbjct: 1156 TDEQIWEVLDKCQLGDEVRKKE 1177


>ref|XP_002265605.2| PREDICTED: ABC transporter C family member 3-like [Vitis vinifera]
          Length = 1485

 Score =  236 bits (602), Expect = 1e-60
 Identities = 112/142 (78%), Positives = 129/142 (90%)
 Frame = +1

Query: 1    PLVIEAHRPDHNWPSHGDVAIHNLQVRYASYMPLILQGLTCTFPGGKKSGIVGRTGSGKS 180
            PLV+E ++P  +WPSHG+V I +LQVRYA ++PL+L+GLTC FPGG K+GIVGRTGSGKS
Sbjct: 1224 PLVMEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSGKS 1283

Query: 181  TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRQKLSINSQDPTMFEGTVISNLDPLEEY 360
            TLIQTLFR+VEPTAG+I+IDGT+ISLIGLHDLR +LSI  QDPTMFEGTV SNLDPLEEY
Sbjct: 1284 TLIQTLFRIVEPTAGEIMIDGTNISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1343

Query: 361  KDEEIWEALDKCQLGDEVRKKE 426
             DE+IWEALDKCQLGDEVRKKE
Sbjct: 1344 SDEQIWEALDKCQLGDEVRKKE 1365


>emb|CBI26749.3| unnamed protein product [Vitis vinifera]
          Length = 1269

 Score =  236 bits (602), Expect = 1e-60
 Identities = 112/142 (78%), Positives = 129/142 (90%)
 Frame = +1

Query: 1    PLVIEAHRPDHNWPSHGDVAIHNLQVRYASYMPLILQGLTCTFPGGKKSGIVGRTGSGKS 180
            PLV+E ++P  +WPSHG+V I +LQVRYA ++PL+L+GLTC FPGG K+GIVGRTGSGKS
Sbjct: 1008 PLVMEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSGKS 1067

Query: 181  TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRQKLSINSQDPTMFEGTVISNLDPLEEY 360
            TLIQTLFR+VEPTAG+I+IDGT+ISLIGLHDLR +LSI  QDPTMFEGTV SNLDPLEEY
Sbjct: 1068 TLIQTLFRIVEPTAGEIMIDGTNISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1127

Query: 361  KDEEIWEALDKCQLGDEVRKKE 426
             DE+IWEALDKCQLGDEVRKKE
Sbjct: 1128 SDEQIWEALDKCQLGDEVRKKE 1149


>emb|CAN75340.1| hypothetical protein VITISV_007527 [Vitis vinifera]
          Length = 1458

 Score =  236 bits (602), Expect = 1e-60
 Identities = 112/142 (78%), Positives = 129/142 (90%)
 Frame = +1

Query: 1    PLVIEAHRPDHNWPSHGDVAIHNLQVRYASYMPLILQGLTCTFPGGKKSGIVGRTGSGKS 180
            PLV+E ++P  +WPSHG+V I +LQVRYA ++PL+L+GLTC FPGG K+GIVGRTGSGKS
Sbjct: 1197 PLVMEGNKPACSWPSHGEVDIRDLQVRYAPHLPLVLRGLTCNFPGGMKTGIVGRTGSGKS 1256

Query: 181  TLIQTLFRLVEPTAGQILIDGTDISLIGLHDLRQKLSINSQDPTMFEGTVISNLDPLEEY 360
            TLIQTLFR+VEPTAG+I+IDGT+ISLIGLHDLR +LSI  QDPTMFEGTV SNLDPLEEY
Sbjct: 1257 TLIQTLFRIVEPTAGEIMIDGTNISLIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEY 1316

Query: 361  KDEEIWEALDKCQLGDEVRKKE 426
             DE+IWEALDKCQLGDEVRKKE
Sbjct: 1317 SDEQIWEALDKCQLGDEVRKKE 1338


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