BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025633
         (647 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273533.1| PREDICTED: mitochondral 37S ribosomal protei...   125   5e-27
ref|XP_002528138.1| conserved hypothetical protein [Ricinus comm...   124   2e-26
ref|XP_004161956.1| PREDICTED: mitochondral 37S ribosomal protei...   122   4e-26
ref|XP_004145134.1| PREDICTED: mitochondral 37S ribosomal protei...   122   4e-26
ref|XP_004154171.1| PREDICTED: mitochondral 37S ribosomal protei...   119   6e-25

>ref|XP_002273533.1| PREDICTED: mitochondral 37S ribosomal protein S27 [Vitis vinifera]
           gi|297738035|emb|CBI27236.3| unnamed protein product
           [Vitis vinifera]
          Length = 102

 Score =  125 bits (315), Expect = 5e-27
 Identities = 59/76 (77%), Positives = 68/76 (89%)
 Frame = +3

Query: 39  LKQMVAAAAITGLTEARARIFGHVLNPTGQRSPHKLLRKKLIGEKVASWYPHDIKKDDPA 218
           LK +++AA   G+TEARARIFGHVLNPTGQRSPHK+LRKKLIGEKVA WYP+DIKKDDP 
Sbjct: 6   LKSLLSAAVKGGVTEARARIFGHVLNPTGQRSPHKILRKKLIGEKVAQWYPYDIKKDDPL 65

Query: 219 IMQREEEARLSKLEML 266
           +M R+E+ RLSKLEML
Sbjct: 66  VMARQEQERLSKLEML 81


>ref|XP_002528138.1| conserved hypothetical protein [Ricinus communis]
           gi|223532436|gb|EEF34229.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 105

 Score =  124 bits (311), Expect = 2e-26
 Identities = 57/76 (75%), Positives = 67/76 (88%)
 Frame = +3

Query: 39  LKQMVAAAAITGLTEARARIFGHVLNPTGQRSPHKLLRKKLIGEKVASWYPHDIKKDDPA 218
           LK ++AAA  TG+ EARARIFGH+LNPTG +SPHK+LRKKLIGEKVA WYPHDIK+DDP 
Sbjct: 7   LKGILAAAVTTGVAEARARIFGHILNPTGLKSPHKILRKKLIGEKVAQWYPHDIKRDDPL 66

Query: 219 IMQREEEARLSKLEML 266
           +M R+E+ RLSKLEML
Sbjct: 67  VMARQEQERLSKLEML 82


>ref|XP_004161956.1| PREDICTED: mitochondral 37S ribosomal protein S27-like [Cucumis
           sativus]
          Length = 141

 Score =  122 bits (307), Expect = 4e-26
 Identities = 58/78 (74%), Positives = 67/78 (85%)
 Frame = +3

Query: 33  SKLKQMVAAAAITGLTEARARIFGHVLNPTGQRSPHKLLRKKLIGEKVASWYPHDIKKDD 212
           + LK M+AAA   G+TEARARIFGH+LNPTGQRS HKLLRKKLIG+KV+ WYP+DIKKDD
Sbjct: 43  NSLKSMIAAAVNKGVTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVSQWYPYDIKKDD 102

Query: 213 PAIMQREEEARLSKLEML 266
           P +M R E+ RLSKLEML
Sbjct: 103 PLVMARLEQERLSKLEML 120


>ref|XP_004145134.1| PREDICTED: mitochondral 37S ribosomal protein S27-like isoform 1
           [Cucumis sativus] gi|449454786|ref|XP_004145135.1|
           PREDICTED: mitochondral 37S ribosomal protein S27-like
           isoform 2 [Cucumis sativus]
           gi|449454788|ref|XP_004145136.1| PREDICTED: mitochondral
           37S ribosomal protein S27-like isoform 3 [Cucumis
           sativus]
          Length = 102

 Score =  122 bits (307), Expect = 4e-26
 Identities = 58/78 (74%), Positives = 67/78 (85%)
 Frame = +3

Query: 33  SKLKQMVAAAAITGLTEARARIFGHVLNPTGQRSPHKLLRKKLIGEKVASWYPHDIKKDD 212
           + LK M+AAA   G+TEARARIFGH+LNPTGQRS HKLLRKKLIG+KV+ WYP+DIKKDD
Sbjct: 4   NSLKSMIAAAVNKGVTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVSQWYPYDIKKDD 63

Query: 213 PAIMQREEEARLSKLEML 266
           P +M R E+ RLSKLEML
Sbjct: 64  PLVMARLEQERLSKLEML 81


>ref|XP_004154171.1| PREDICTED: mitochondral 37S ribosomal protein S27-like [Cucumis
           sativus]
          Length = 94

 Score =  119 bits (297), Expect = 6e-25
 Identities = 56/73 (76%), Positives = 64/73 (87%)
 Frame = +3

Query: 48  MVAAAAITGLTEARARIFGHVLNPTGQRSPHKLLRKKLIGEKVASWYPHDIKKDDPAIMQ 227
           M+AAA   G+TEARARIFGH+LNPTGQRS HKLLRKKLIG+KV+ WYP+DIKKDDP +M 
Sbjct: 1   MIAAAVNKGVTEARARIFGHILNPTGQRSTHKLLRKKLIGDKVSQWYPYDIKKDDPLVMA 60

Query: 228 REEEARLSKLEML 266
           R E+ RLSKLEML
Sbjct: 61  RLEQERLSKLEML 73