BLASTX nr result

ID: Coptis25_contig00025632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025632
         (837 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274846.1| PREDICTED: calmodulin-binding transcription ...   133   3e-57
ref|XP_002519300.1| calmodulin-binding transcription activator (...   135   5e-55
ref|XP_002316071.1| predicted protein [Populus trichocarpa] gi|2...   137   6e-53
ref|XP_003550574.1| PREDICTED: calmodulin-binding transcription ...   125   1e-52
gb|AEX07777.1| calmodulin-binding transcription factor SR4 [Sola...    96   1e-38

>ref|XP_002274846.1| PREDICTED: calmodulin-binding transcription activator 1 [Vitis
           vinifera] gi|297736797|emb|CBI25998.3| unnamed protein
           product [Vitis vinifera]
          Length = 1018

 Score =  133 bits (334), Expect(2) = 3e-57
 Identities = 67/95 (70%), Positives = 76/95 (80%)
 Frame = -3

Query: 547 HNDEPGELKKLDNFGR*MNKEICGDCDDSFLTSDSGTYWNTLDAQNEDKEVSSLTCYLQL 368
           +ND  GELKKLD+FGR M+KEI GDCDDS + SDSG YWNTLD QN+DKEVSSL+ ++QL
Sbjct: 371 NNDASGELKKLDSFGRWMDKEIGGDCDDSLMASDSGNYWNTLDTQNDDKEVSSLSRHMQL 430

Query: 367 DTGSLGPSLS*EQLFGISDFSPD*AYSGTETKAHI 263
           D  SL PSLS EQLF I+DFSPD AYS  ETK  I
Sbjct: 431 DIDSLAPSLSQEQLFTINDFSPDWAYSEDETKVLI 465



 Score =  115 bits (289), Expect(2) = 3e-57
 Identities = 54/90 (60%), Positives = 68/90 (75%)
 Frame = -2

Query: 272 GTYLGDSKLSKITKWSCMFLEVKVPVEILTDNVLRCHAPLHASGRVPFYVICSNRLACTE 93
           GT+LG  + S  TKW CMF E++V  E+LT+NV+RCHAPLHA GRVPFYV CSNRLAC+E
Sbjct: 467 GTFLGGMEHSTNTKWCCMFGEIEVSAEVLTNNVIRCHAPLHAPGRVPFYVTCSNRLACSE 526

Query: 92  VREFEFYEKLSAKSSLAVVISEPDDEMRIQ 3
           VREFE+ EK S  +    V S P+D+++ Q
Sbjct: 527 VREFEYREKPSRVAFSMAVRSTPEDDVQFQ 556


>ref|XP_002519300.1| calmodulin-binding transcription activator (camta), plants,
           putative [Ricinus communis] gi|223541615|gb|EEF43164.1|
           calmodulin-binding transcription activator (camta),
           plants, putative [Ricinus communis]
          Length = 999

 Score =  135 bits (340), Expect(2) = 5e-55
 Identities = 68/99 (68%), Positives = 78/99 (78%)
 Frame = -3

Query: 559 DADTHNDEPGELKKLDNFGR*MNKEICGDCDDSFLTSDSGTYWNTLDAQNEDKEVSSLTC 380
           D   ++ E GELKKLD+FGR M+KEI GDCDDS + SDSG YWNTL A+NE+KEVSSL+ 
Sbjct: 359 DGSANDSELGELKKLDSFGRWMDKEIGGDCDDSLMASDSGNYWNTLGAENEEKEVSSLSH 418

Query: 379 YLQLDTGSLGPSLS*EQLFGISDFSPD*AYSGTETKAHI 263
           ++QLD  SLGPSLS EQLF I DFSPD AYSG ETK  I
Sbjct: 419 HMQLDIESLGPSLSQEQLFSIHDFSPDWAYSGVETKVLI 457



 Score =  105 bits (263), Expect(2) = 5e-55
 Identities = 49/90 (54%), Positives = 67/90 (74%)
 Frame = -2

Query: 272 GTYLGDSKLSKITKWSCMFLEVKVPVEILTDNVLRCHAPLHASGRVPFYVICSNRLACTE 93
           GT+LG  K S   KW CMF E++V  E+LT+NV++C APLH SGRVPFY+ C NRLAC+E
Sbjct: 459 GTFLGSKKFSSERKWGCMFGEIEVSAEVLTNNVVKCQAPLHVSGRVPFYITCRNRLACSE 518

Query: 92  VREFEFYEKLSAKSSLAVVISEPDDEMRIQ 3
           VREFE+ +  S+ +SL+ V S   +E+++Q
Sbjct: 519 VREFEYRDNPSSIASLS-VRSVQQEELQLQ 547


>ref|XP_002316071.1| predicted protein [Populus trichocarpa] gi|222865111|gb|EEF02242.1|
           predicted protein [Populus trichocarpa]
          Length = 933

 Score =  137 bits (344), Expect(2) = 6e-53
 Identities = 68/99 (68%), Positives = 79/99 (79%)
 Frame = -3

Query: 559 DADTHNDEPGELKKLDNFGR*MNKEICGDCDDSFLTSDSGTYWNTLDAQNEDKEVSSLTC 380
           D   +N E GELKKLD+FGR M+KEI GDCDDS + SDSG YW+TL A+NEDKEVSSL+ 
Sbjct: 310 DGGANNIESGELKKLDSFGRWMDKEIGGDCDDSLMASDSGNYWSTLSAENEDKEVSSLSH 369

Query: 379 YLQLDTGSLGPSLS*EQLFGISDFSPD*AYSGTETKAHI 263
           ++QLDT SLGPSLS +QLF I DFSPD AYSG +TK  I
Sbjct: 370 HMQLDTDSLGPSLSQDQLFSIRDFSPDWAYSGVDTKVLI 408



 Score = 97.4 bits (241), Expect(2) = 6e-53
 Identities = 43/85 (50%), Positives = 57/85 (67%)
 Frame = -2

Query: 272 GTYLGDSKLSKITKWSCMFLEVKVPVEILTDNVLRCHAPLHASGRVPFYVICSNRLACTE 93
           GT+LG  K S  TKW CMF E++V  E+L D V+RC  P HA GRVPFY+ C NRL+C+E
Sbjct: 410 GTFLGSKKFSSETKWGCMFGEIEVSAEVLNDCVIRCQVPQHAPGRVPFYITCRNRLSCSE 469

Query: 92  VREFEFYEKLSAKSSLAVVISEPDD 18
           VREFE+ E     +SL    ++ ++
Sbjct: 470 VREFEYRENPFGTASLPAESAQQEE 494


>ref|XP_003550574.1| PREDICTED: calmodulin-binding transcription activator 2-like
           [Glycine max]
          Length = 999

 Score =  125 bits (314), Expect(2) = 1e-52
 Identities = 67/118 (56%), Positives = 83/118 (70%), Gaps = 5/118 (4%)
 Frame = -3

Query: 601 LLLTVALGIGRAFADADTHNDEP-----GELKKLDNFGR*MNKEICGDCDDSFLTSDSGT 437
           ++ T  + + +   D   +NDE      GE+KKLD+FGR M+KEI GDCD+S + SDSG 
Sbjct: 351 VVATTKILVEQKLQDGGLYNDESEQVEYGEMKKLDSFGRWMDKEIGGDCDNSLMASDSGN 410

Query: 436 YWNTLDAQNEDKEVSSLTCYLQLDTGSLGPSLS*EQLFGISDFSPD*AYSGTETKAHI 263
           YW+TLDA +EDKEVSSL  ++QLD  SLGPSLS EQLF I DFSPD AY+G  TK  I
Sbjct: 411 YWSTLDAHSEDKEVSSLR-HMQLDVDSLGPSLSQEQLFSIHDFSPDWAYTGVRTKVLI 467



 Score =  107 bits (268), Expect(2) = 1e-52
 Identities = 49/90 (54%), Positives = 63/90 (70%)
 Frame = -2

Query: 272 GTYLGDSKLSKITKWSCMFLEVKVPVEILTDNVLRCHAPLHASGRVPFYVICSNRLACTE 93
           GT+LG  K S  TKW CMF E++V  E+L DNV+RC  PLH+ GRVPFY+ CSNRLAC+E
Sbjct: 469 GTFLGSKKPSSETKWGCMFGEIEVSAEVLADNVIRCQTPLHSPGRVPFYITCSNRLACSE 528

Query: 92  VREFEFYEKLSAKSSLAVVISEPDDEMRIQ 3
           VREFEF E  +       +   P++E+R+Q
Sbjct: 529 VREFEFDENPTKFLGPEGIKISPEEEVRLQ 558


>gb|AEX07777.1| calmodulin-binding transcription factor SR4 [Solanum lycopersicum]
          Length = 939

 Score = 96.3 bits (238), Expect(2) = 1e-38
 Identities = 52/99 (52%), Positives = 67/99 (67%)
 Frame = -3

Query: 559 DADTHNDEPGELKKLDNFGR*MNKEICGDCDDSFLTSDSGTYWNTLDAQNEDKEVSSLTC 380
           D   ++DE G LKKLD  G+ M++E  G  + S ++SDSG YWNTLD  N DKEVS+L+ 
Sbjct: 305 DGGLNSDEVGSLKKLDILGKWMDREFAGG-NKSLMSSDSGNYWNTLDTDNGDKEVSTLSR 363

Query: 379 YLQLDTGSLGPSLS*EQLFGISDFSPD*AYSGTETKAHI 263
           +L L+  S+G S S +QLF I DFSP  A+SG ETK  I
Sbjct: 364 HLLLEANSVGTSPSQKQLFRIFDFSPQWAFSGVETKVLI 402



 Score = 90.5 bits (223), Expect(2) = 1e-38
 Identities = 47/90 (52%), Positives = 58/90 (64%)
 Frame = -2

Query: 272 GTYLGDSKLSKITKWSCMFLEVKVPVEILTDNVLRCHAPLHASGRVPFYVICSNRLACTE 93
           GT+L   K     KWSCMF EV+V  E+ T ++ RC  P HA G VPFYV C NRLAC+E
Sbjct: 404 GTFLVHRKYLTCLKWSCMFGEVEVSAEVQTQSI-RCQVPFHAPGHVPFYVTCGNRLACSE 462

Query: 92  VREFEFYEKLSAKSSLAVVISEPDDEMRIQ 3
           VREFE+ EK    S LA+ +  P DE+ +Q
Sbjct: 463 VREFEYREK---SSELALAL-RPSDEVHLQ 488


Top