BLASTX nr result

ID: Coptis25_contig00025629 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025629
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25465.3| unnamed protein product [Vitis vinifera]               92   6e-17
ref|XP_002272219.1| PREDICTED: gibberellin 2-beta-dioxygenase 1-...    92   6e-17
ref|XP_004165141.1| PREDICTED: LOW QUALITY PROTEIN: 2'-deoxymugi...    69   4e-10
ref|XP_004148203.1| PREDICTED: 2'-deoxymugineic-acid 2'-dioxygen...    69   4e-10
ref|XP_003616656.1| Gibberellin 2-beta-dioxygenase [Medicago tru...    67   2e-09

>emb|CBI25465.3| unnamed protein product [Vitis vinifera]
          Length = 380

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 61/154 (39%), Positives = 72/154 (46%)
 Frame = -2

Query: 550 MASSAENHQPHSATYGXXXXXXXXXXXXTNCLSTNDAADTXXXXXXXXXXXXXXXXXXXX 371
           MASSA  H P    YG             + +ST+DAAD                     
Sbjct: 1   MASSA--HTPPPNPYGTTVAPPPTPSTQPSHVSTSDAADAISRLFQRLPPALSLPTRASP 58

Query: 370 RTTCPPSISFSPQNTSFLDPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKTQ 191
           R T PPSISFS QN + L   LS  SQ GFFQL +HPIPSQ           LF+L + Q
Sbjct: 59  RATSPPSISFSDQNLNLLSDLLSFSSQHGFFQLIDHPIPSQLARSAESESLALFDLPRPQ 118

Query: 190 KHQSFSNTWPLGYDEGDDNNNMEEGGPIESFCFD 89
           K  SF   WPLG+D  +D    EE G  E+FC +
Sbjct: 119 KQHSFPKNWPLGFDADED----EEDGAGEAFCLE 148


>ref|XP_002272219.1| PREDICTED: gibberellin 2-beta-dioxygenase 1-like [Vitis vinifera]
          Length = 382

 Score = 92.0 bits (227), Expect = 6e-17
 Identities = 61/154 (39%), Positives = 72/154 (46%)
 Frame = -2

Query: 550 MASSAENHQPHSATYGXXXXXXXXXXXXTNCLSTNDAADTXXXXXXXXXXXXXXXXXXXX 371
           MASSA  H P    YG             + +ST+DAAD                     
Sbjct: 1   MASSA--HTPPPNPYGTTVAPPPTPSTQPSHVSTSDAADAISRLFQRLPPALSLPTRASP 58

Query: 370 RTTCPPSISFSPQNTSFLDPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKTQ 191
           R T PPSISFS QN + L   LS  SQ GFFQL +HPIPSQ           LF+L + Q
Sbjct: 59  RATSPPSISFSDQNLNLLSDLLSFSSQHGFFQLIDHPIPSQLARSAESESLALFDLPRPQ 118

Query: 190 KHQSFSNTWPLGYDEGDDNNNMEEGGPIESFCFD 89
           K  SF   WPLG+D  +D    EE G  E+FC +
Sbjct: 119 KQHSFPKNWPLGFDADED----EEDGAGEAFCLE 148


>ref|XP_004165141.1| PREDICTED: LOW QUALITY PROTEIN: 2'-deoxymugineic-acid
           2'-dioxygenase-like [Cucumis sativus]
          Length = 377

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 54/156 (34%), Positives = 68/156 (43%), Gaps = 2/156 (1%)
 Frame = -2

Query: 550 MASSAENHQPHSATYGXXXXXXXXXXXXTNCLSTNDAADTXXXXXXXXXXXXXXXXXXXX 371
           MASS +++Q  +   G            TN LST+ AAD                     
Sbjct: 1   MASSLDHNQLPNIHAGATAAPPPTPSSQTNHLSTSAAADALSKLLHRLPPNLSLPTRRSP 60

Query: 370 RTTCPPSISFSPQ-NTSFLDPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKT 194
               PP+ISFS   N   L+  LS+ S+LGFFQLT+H I S            LFNL   
Sbjct: 61  SVIPPPTISFSESPNPDLLNRLLSAASELGFFQLTDHKISSHLALSAESESAPLFNLPAE 120

Query: 193 QKHQSFSNTWPLGY-DEGDDNNNMEEGGPIESFCFD 89
           +K   F   WPLG+  +GD+    E  G  ES CFD
Sbjct: 121 KKESLFPKNWPLGFKGDGDE----ESDGSGESLCFD 152


>ref|XP_004148203.1| PREDICTED: 2'-deoxymugineic-acid 2'-dioxygenase-like [Cucumis
           sativus]
          Length = 384

 Score = 69.3 bits (168), Expect = 4e-10
 Identities = 54/156 (34%), Positives = 68/156 (43%), Gaps = 2/156 (1%)
 Frame = -2

Query: 550 MASSAENHQPHSATYGXXXXXXXXXXXXTNCLSTNDAADTXXXXXXXXXXXXXXXXXXXX 371
           MASS +++Q  +   G            TN LST+ AAD                     
Sbjct: 1   MASSLDHNQLPNIHAGATAAPPPTPSSQTNHLSTSAAADALSKLLHRLPPNLSLPTRRSP 60

Query: 370 RTTCPPSISFSPQ-NTSFLDPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKT 194
               PP+ISFS   N   L+  LS+ S+LGFFQLT+H I S            LFNL   
Sbjct: 61  SVIPPPTISFSESPNPDLLNRLLSAASELGFFQLTDHKISSHLALSAESESAPLFNLPAE 120

Query: 193 QKHQSFSNTWPLGY-DEGDDNNNMEEGGPIESFCFD 89
           +K   F   WPLG+  +GD+    E  G  ES CFD
Sbjct: 121 KKESLFPKNWPLGFKGDGDE----ESDGSGESLCFD 152


>ref|XP_003616656.1| Gibberellin 2-beta-dioxygenase [Medicago truncatula]
           gi|355517991|gb|AES99614.1| Gibberellin
           2-beta-dioxygenase [Medicago truncatula]
          Length = 379

 Score = 67.4 bits (163), Expect = 2e-09
 Identities = 42/92 (45%), Positives = 52/92 (56%)
 Frame = -2

Query: 367 TTCPPSISFSPQNTSFLDPYLSSFSQLGFFQLTNHPIPSQXXXXXXXXXXXLFNLSKTQK 188
           TT PPS+SFS      L   +SS SQLGF QLT+H + S+           LFNLS  QK
Sbjct: 70  TTSPPSLSFSSLTPEKL---ISSISQLGFIQLTDHSVSSKLANLAESESLKLFNLSHDQK 126

Query: 187 HQSFSNTWPLGYDEGDDNNNMEEGGPIESFCF 92
              F   WP GY EGD++N+ E+   +ESF F
Sbjct: 127 ESFFPQNWPFGY-EGDNDNDEEK--LVESFRF 155


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