BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025616
         (1479 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...   608   e-172
ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containi...   544   e-152
ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containi...   516   e-144
emb|CBI19766.3| unnamed protein product [Vitis vinifera]              506   e-141
ref|XP_003615696.1| Pentatricopeptide repeat-containing protein ...   501   e-139

>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Vitis vinifera]
          Length = 1545

 Score =  608 bits (1569), Expect = e-172
 Identities = 299/491 (60%), Positives = 378/491 (76%)
 Frame = +2

Query: 2    LGVKLRSMGDVLLGNSLIDIYSKCGDLEGARSIFDMILEKDVFTWNTMIGGYTQAGYFGK 181
            + VK+  + D+L+GNSLID+YSK G+LE AR +FDMIL+KDV+TWN+MIGGY QAGY GK
Sbjct: 381  VAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGK 440

Query: 182  AYDLFTRMQDSAVTPNVITWNVMISGYIRKGDEDQAMDLFQRMEADGTTKRNVASWNSLI 361
            AYDLF +M +S V PNV+TWN MISGYI+ GDEDQAMDLF RME DG  KR+ ASWNSLI
Sbjct: 441  AYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLI 500

Query: 362  SGLLQNGQKNKAFRFLRQMQSCSTRPNSITMLSILPACANLVATKKVKEIHGCVLRGRLQ 541
            +G LQNG KNKA    RQMQS   RPNS+TMLSILPACANLVA KKVKEIHGC+LR  L 
Sbjct: 501  AGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLG 560

Query: 542  LETSVANTLIDAYAKSGNILYARVVFEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQM 721
             E SVAN LID YAKSGNI+YA+ +F+ + S+D+ISWN+L+AGYVLHGC + AL++F+QM
Sbjct: 561  SELSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQM 620

Query: 722  RLLGPKPNRGTFVSIILAYSLAGMVEQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHR 901
              +G KP+RGTF+SII A+SL+GMV++G    SSM  DYQI PG EH+SAM+DLLGRS +
Sbjct: 621  TKMGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGK 680

Query: 902  LGEAVNFVEEMGIEQDYAIWDALLTASRVHGNIALAVRAAECLFDMGPKSVNIYRLLVQL 1081
            LGEA+ F+E+M IE D  IW ALLTAS++HGNI LA+RA ECL ++ P + +I++ ++Q+
Sbjct: 681  LGEAIEFIEDMAIEPDSCIWAALLTASKIHGNIGLAIRAGECLLELEPSNFSIHQQILQM 740

Query: 1082 YGLSGRSDDAVKVRKPQKWSGLEYSTGCSWIEMKNTVHTIGTGERSMTNSKRIYSQLARI 1261
            Y LSG+ +D  K+RK +K S  +   GCSWIE KN VHT    +RS      ++S +  +
Sbjct: 741  YALSGKFEDVSKLRKSEKRSETKQPLGCSWIEAKNIVHTFVADDRSRPYFDFLHSWIENV 800

Query: 1262 AEEIKIVLLYPHDTQLCIEDEEREEKCGFHSEKLALSFALISTPYSSQSIRIIKNCRMCG 1441
            A ++K      HD +L IE+EE+EE  G HSEKLAL+FALI    + +S+RI+KN RMCG
Sbjct: 801  ARKVKAP--DQHD-RLFIEEEEKEEIGGVHSEKLALAFALIDPSCAPRSVRIVKNLRMCG 857

Query: 1442 DCHRTAKFISL 1474
            DCH TAKF+S+
Sbjct: 858  DCHGTAKFLSM 868



 Score =  182 bits (463), Expect = 1e-43
 Identities = 112/375 (29%), Positives = 190/375 (50%), Gaps = 18/375 (4%)
 Frame = +2

Query: 29   DVLLGNSLIDIYSKCGDLEGARSIFDMILEKDVFTWNTMIGGYTQAGYFGKAYDLFTRMQ 208
            ++ + NS++ +Y+KCG L  AR  F+ +  +D  +WN++I GY Q G   K++ LF +MQ
Sbjct: 219  NIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQ 278

Query: 209  DSAVTPNVITWNVMISGYIRKGDEDQAMDLFQRMEADGTTKRNVASWNSLISGLLQNGQK 388
            +  + P ++TWN++I+ Y + G  D AM+L ++ME+      +V +W S+ISG  QN ++
Sbjct: 279  EEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVP-DVFTWTSMISGFAQNNRR 337

Query: 389  NKAFRFLRQMQSCSTRPNSITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTL 568
            ++A    R+M      PN +T+ S + ACA+L A KK  E+H   ++     +  V N+L
Sbjct: 338  SQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSL 397

Query: 569  IDAYAKSGNILYARVVFEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPNR 748
            ID Y+KSG +  AR VF+ +  +DV +WN+++ GY   G   +A ++F +M      PN 
Sbjct: 398  IDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNV 457

Query: 749  GTFVSIILAYSLAGMVEQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHRLGEAV---- 916
             T+ ++I  Y   G  +Q       M  D  I   +  +++++    ++    +A+    
Sbjct: 458  VTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFR 517

Query: 917  ---------NFVEEMGIEQDYAIWDALLTASRVHG-----NIALAVRAAECLFDMGPKSV 1054
                     N V  + I    A   A      +HG     N+   +  A CL D   KS 
Sbjct: 518  QMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSG 577

Query: 1055 NIYRLLVQLYGLSGR 1099
            NI        G+S +
Sbjct: 578  NIVYAQTIFQGISSK 592



 Score = 95.9 bits (237), Expect = 2e-17
 Identities = 75/304 (24%), Positives = 139/304 (45%), Gaps = 13/304 (4%)
 Frame = +2

Query: 248  MISGYIRKGDEDQAMDLFQRMEADGTTKRNVASWNSLISGLLQNGQKNKAFRFLRQMQSC 427
            ++S Y + G   +A  +F  M      +RN+ +W+++I    +     +  +    M   
Sbjct: 125  LVSMYAKCGSLGEARKVFGEMR-----ERNLYAWSAMIGAYSREQMWREVVQHFFFMMED 179

Query: 428  STRPNSITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYA 607
               P+   +  IL AC N    +  K IH  V+R  +     V+N+++  YAK G +  A
Sbjct: 180  GIVPDEFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCA 239

Query: 608  RVVFEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPNRGTFVSIILAYSLA 787
            R  FE++  RD +SWN+++ GY   G   ++  +FE+M+  G +P   T+  +I +YS +
Sbjct: 240  RRFFENMDYRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQS 299

Query: 788  GMVEQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHRLGEAVNFVEEM---GIEQD--- 949
            G  +     +  M   ++I P    +++M+    +++R  +A+    EM   GIE +   
Sbjct: 300  GKCDDAMELMKKM-ESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAGIEPNGVT 358

Query: 950  -------YAIWDALLTASRVHGNIALAVRAAECLFDMGPKSVNIYRLLVQLYGLSGRSDD 1108
                    A   AL     +H ++A+ +   E L         +   L+ +Y  SG  +D
Sbjct: 359  VTSGISACASLKALKKGMELH-SVAVKIGCVEDLL--------VGNSLIDMYSKSGELED 409

Query: 1109 AVKV 1120
            A +V
Sbjct: 410  ARRV 413



 Score = 85.1 bits (209), Expect = 4e-14
 Identities = 86/414 (20%), Positives = 166/414 (40%), Gaps = 40/414 (9%)
 Frame = +2

Query: 50   LIDIYSKCGDLEGARSIFDMILEKDVFTWNTMIGGYTQAGYFGKAYDLFTRMQDSAVTP- 226
            L+ +Y+KCG L  AR +F  + E++++ W+ MIG Y++   + +    F  M +  + P 
Sbjct: 125  LVSMYAKCGSLGEARKVFGEMRERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPD 184

Query: 227  ----------------------------------NVITWNVMISGYIRKGDEDQAMDLFQ 304
                                              N+   N +++ Y + G    A   F+
Sbjct: 185  EFLLPKILQACGNCGDAETGKLIHSLVIRCGMNFNIRVSNSILAVYAKCGRLSCARRFFE 244

Query: 305  RMEADGTTKRNVASWNSLISGLLQNGQKNKAFRFLRQMQSCSTRPNSITMLSILPACANL 484
             M+      R+  SWNS+I+G  Q G+  K+ +   +MQ     P  +T           
Sbjct: 245  NMD-----YRDRVSWNSIITGYCQKGELEKSHQLFEKMQEEGIEPGLVTW---------- 289

Query: 485  VATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVVFEHLPS----RDVISW 652
                                     N LI++Y++SG    A  + + + S     DV +W
Sbjct: 290  -------------------------NILINSYSQSGKCDDAMELMKKMESFRIVPDVFTW 324

Query: 653  NTLMAGYVLHGCPNEALNIFEQMRLLGPKPNRGTFVSIILAYSLAGMVEQGNSTLSSMTN 832
             ++++G+  +   ++AL +F +M L G +PN  T  S I A +    +++G   L S+  
Sbjct: 325  TSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKG-MELHSVAV 383

Query: 833  DYQISPGSEHYSAMLDLLGRSHRLGEAVNFVEEMGIEQDYAIWDALLTASRVHGNIALAV 1012
                       ++++D+  +S  L +A   V +M +++D   W++++      G    A 
Sbjct: 384  KIGCVEDLLVGNSLIDMYSKSGELEDA-RRVFDMILKKDVYTWNSMIGGYCQAGYCGKAY 442

Query: 1013 RAAECLFDMG-PKSVNIYRLLVQLYGLSGRSDDAVKVRKPQKWSGLEYSTGCSW 1171
                 + +   P +V  +  ++  Y  +G  D A+ +    +  GL      SW
Sbjct: 443  DLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASW 496



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 59/278 (21%), Positives = 121/278 (43%), Gaps = 2/278 (0%)
 Frame = +2

Query: 299  FQRMEADGTTKRNVASWNSLISGLLQNGQKNKAFRFLRQMQSCSTRPNSITMLSILPACA 478
            F ++    T K      ++ ++ L +NG+   A   L  +    +     T + +L +C 
Sbjct: 37   FTKIHQPLTPKLKPKVTDAHLNHLCKNGRLADAIACLDAIAQGGSNVKPNTYMQLLQSCI 96

Query: 479  NLVATKKVKEIHGCVLRGRLQ-LETSVANTLIDAYAKSGNILYARVVFEHLPSRDVISWN 655
            +  + +  +++H  +  G L+ +   V   L+  YAK G++  AR VF  +  R++ +W+
Sbjct: 97   DQGSAELGRKLHARI--GLLEEMNPFVETKLVSMYAKCGSLGEARKVFGEMRERNLYAWS 154

Query: 656  TLMAGYVLHGCPNEALNIFEQMRLLGPKPNRGTFVSIILAYSLAGMVEQGNSTLSSMTND 835
             ++  Y       E +  F  M   G  P+      I+ A    G  E G   + S+   
Sbjct: 155  AMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETG-KLIHSLVIR 213

Query: 836  YQISPGSEHYSAMLDLLGRSHRLGEAVNFVEEMGIEQDYAIWDALLTASRVHGNIALAVR 1015
              ++      +++L +  +  RL  A  F E M   +D   W++++T     G +  + +
Sbjct: 214  CGMNFNIRVSNSILAVYAKCGRLSCARRFFENMDY-RDRVSWNSIITGYCQKGELEKSHQ 272

Query: 1016 AAECLFDMG-PKSVNIYRLLVQLYGLSGRSDDAVKVRK 1126
              E + + G    +  + +L+  Y  SG+ DDA+++ K
Sbjct: 273  LFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMK 310


>ref|XP_004152769.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Cucumis sativus]
          Length = 1463

 Score =  544 bits (1401), Expect = e-152
 Identities = 272/489 (55%), Positives = 359/489 (73%), Gaps = 1/489 (0%)
 Frame = +2

Query: 8    VKLRSMGDVLLGNSLIDIYSKCGDLEGARSIFDMILEKDVFTWNTMIGGYTQAGYFGKAY 187
            +K+    + L+GNSLID+YSKCG LE AR +FD ILEKDV+TWN+MIGGY QAGY GKAY
Sbjct: 378  IKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAY 437

Query: 188  DLFTRMQDSAVTPNVITWNVMISGYIRKGDEDQAMDLFQRMEADGTTKRNVASWNSLISG 367
            +LF R+++S V PNV+TWN MISG I+ GDEDQAMDLFQ ME DG  KRN ASWNSLI+G
Sbjct: 438  ELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAG 497

Query: 368  LLQNGQKNKAFRFLRQMQSCSTRPNSITMLSILPACANLVATKKVKEIHGCVLRGRLQLE 547
              Q G+KNKA    RQMQS +  PNS+T+LSILPACAN++A KK+KEIHGCVLR  L+ E
Sbjct: 498  YHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESE 557

Query: 548  TSVANTLIDAYAKSGNILYARVVFEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRL 727
             +VAN+L+D YAKSGNI Y+R VF  + S+D+I+WN+++AGY+LHGC + A  +F+QMR 
Sbjct: 558  LAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRN 617

Query: 728  LGPKPNRGTFVSIILAYSLAGMVEQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHRLG 907
            LG +PNRGT  SII AY +AGMV++G    SS+T ++QI P  +HY AM+DL GRS RL 
Sbjct: 618  LGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLA 677

Query: 908  EAVNFVEEMGIEQDYAIWDALLTASRVHGNIALAVRAAECLFDMGPKSVNIYRLLVQLYG 1087
            +A+ F+E+M IE D +IW +LLTA R HGN+ LAV AA+ L ++ P +  IYRLLVQ Y 
Sbjct: 678  DAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRLLVQAYA 737

Query: 1088 LSGRSDDAVKVRKPQKWSGLEYSTGCSWIEMKNTVHTIGTGERSMTNSKRIYSQLARIAE 1267
            L G+ +  +KVRK  K S ++  T   W+E++N VH   TG++S  +   + + +  I  
Sbjct: 738  LYGKFEQTLKVRKLGKESAMKKCTAQCWVEVRNKVHLFVTGDQSKLDV--LNTWIKSIEG 795

Query: 1268 EIKIVLLYPHDTQLCIEDEEREEKC-GFHSEKLALSFALISTPYSSQSIRIIKNCRMCGD 1444
            ++K    + +  QL IE+EE+EEK  GFH EK A +F LI + ++ +SI+I+KN RMC D
Sbjct: 796  KVK---KFNNHHQLSIEEEEKEEKIGGFHCEKFAFAFGLIGSSHTRKSIKIVKNLRMCVD 852

Query: 1445 CHRTAKFIS 1471
            CH+ AK+IS
Sbjct: 853  CHQMAKYIS 861



 Score =  162 bits (411), Expect = 2e-37
 Identities = 96/291 (32%), Positives = 156/291 (53%)
 Frame = +2

Query: 38   LGNSLIDIYSKCGDLEGARSIFDMILEKDVFTWNTMIGGYTQAGYFGKAYDLFTRMQDSA 217
            L NS++  + KCG L  AR  F  + E+D  +WN MI GY Q G   +A  L   M +  
Sbjct: 217  LSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQG 276

Query: 218  VTPNVITWNVMISGYIRKGDEDQAMDLFQRMEADGTTKRNVASWNSLISGLLQNGQKNKA 397
              P ++T+N+MI+ Y + GD D  +DL ++ME+ G    +V +W S+ISG  Q+ + ++A
Sbjct: 277  FKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAP-DVYTWTSMISGFSQSSRISQA 335

Query: 398  FRFLRQMQSCSTRPNSITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDA 577
              F ++M      PN+IT+ S   ACA+L + +   EIH   ++  +  ET V N+LID 
Sbjct: 336  LDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDM 395

Query: 578  YAKSGNILYARVVFEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPNRGTF 757
            Y+K G +  AR VF+ +  +DV +WN+++ GY   G   +A  +F ++R     PN  T+
Sbjct: 396  YSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTW 455

Query: 758  VSIILAYSLAGMVEQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHRLGE 910
             ++I      G  +Q       M  D  +   +  +++   L+   H+LGE
Sbjct: 456  NAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNS---LIAGYHQLGE 503



 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 60/229 (26%), Positives = 109/229 (47%)
 Frame = +2

Query: 248 MISGYIRKGDEDQAMDLFQRMEADGTTKRNVASWNSLISGLLQNGQKNKAFRFLRQMQSC 427
           ++S Y + G    A  +F     DG  +RN+ +W+++I    +  +  +       M   
Sbjct: 120 LVSMYAKCGCLKDARKVF-----DGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGD 174

Query: 428 STRPNSITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYA 607
              P++     IL AC N    + VK IH  V+R  L     ++N+++ A+ K G +  A
Sbjct: 175 GVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLA 234

Query: 608 RVVFEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPNRGTFVSIILAYSLA 787
           R  F ++  RD +SWN ++AGY   G  +EA  + + M   G KP   T+  +I +YS  
Sbjct: 235 RKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQL 294

Query: 788 GMVEQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHRLGEAVNFVEEM 934
           G  +     L        ++P    +++M+    +S R+ +A++F ++M
Sbjct: 295 GDCDL-VIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKM 342


>ref|XP_004168675.1| PREDICTED: pentatricopeptide repeat-containing protein
            At1g19720-like, partial [Cucumis sativus]
          Length = 1090

 Score =  516 bits (1329), Expect = e-144
 Identities = 260/471 (55%), Positives = 344/471 (73%), Gaps = 1/471 (0%)
 Frame = +2

Query: 8    VKLRSMGDVLLGNSLIDIYSKCGDLEGARSIFDMILEKDVFTWNTMIGGYTQAGYFGKAY 187
            +K+    + L+GNSLID+YSKCG LE AR +FD ILEKDV+TWN+MIGGY QAGY GKAY
Sbjct: 378  IKMGIARETLVGNSLIDMYSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAY 437

Query: 188  DLFTRMQDSAVTPNVITWNVMISGYIRKGDEDQAMDLFQRMEADGTTKRNVASWNSLISG 367
            +LF R+++S V PNV+TWN MISG I+ GDEDQAMDLFQ ME DG  KRN ASWNSLI+G
Sbjct: 438  ELFMRLRESTVMPNVVTWNAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNSLIAG 497

Query: 368  LLQNGQKNKAFRFLRQMQSCSTRPNSITMLSILPACANLVATKKVKEIHGCVLRGRLQLE 547
              Q G+KNKA    RQMQS +  PNS+T+LSILPACAN++A KK+KEIHGCVLR  L+ E
Sbjct: 498  YHQLGEKNKALAIFRQMQSLNFSPNSVTILSILPACANVMAEKKIKEIHGCVLRRNLESE 557

Query: 548  TSVANTLIDAYAKSGNILYARVVFEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRL 727
             +VAN+L+D YAKSGNI Y+R VF  + S+D+I+WN+++AGY+LHGC + A  +F+QMR 
Sbjct: 558  LAVANSLVDTYAKSGNIKYSRTVFNGMSSKDIITWNSIIAGYILHGCSDSAFQLFDQMRN 617

Query: 728  LGPKPNRGTFVSIILAYSLAGMVEQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHRLG 907
            LG +PNRGT  SII AY +AGMV++G    SS+T ++QI P  +HY AM+DL GRS RL 
Sbjct: 618  LGIRPNRGTLASIIHAYGIAGMVDKGRHVFSSITEEHQILPTLDHYLAMVDLYGRSGRLA 677

Query: 908  EAVNFVEEMGIEQDYAIWDALLTASRVHGNIALAVRAAECLFDMGPKSVNIYRLLVQLYG 1087
            +A+ F+E+M IE D +IW +LLTA R HGN+ LAV AA+ L ++ P +  IYRLLVQ Y 
Sbjct: 678  DAIEFIEDMPIEPDVSIWTSLLTACRFHGNLNLAVLAAKRLHELEPDNHVIYRLLVQAYA 737

Query: 1088 LSGRSDDAVKVRKPQKWSGLEYSTGCSWIEMKNTVHTIGTGERSMTNSKRIYSQLARIAE 1267
            L G+ +  +KVRK  K S ++  T   W+E++N VH   TG++S  +   + + +  I  
Sbjct: 738  LYGKFEQTLKVRKLGKESAMKKCTAQCWVEVRNKVHLFVTGDQSKLDV--LNTWIKSIEG 795

Query: 1268 EIKIVLLYPHDTQLCIEDEEREEKC-GFHSEKLALSFALISTPYSSQSIRI 1417
            ++K    + +  QL IE+EE+EEK  GFH EK A +F LI + ++ +SI+I
Sbjct: 796  KVK---KFNNHHQLSIEEEEKEEKIGGFHCEKFAFAFGLIGSSHTRKSIKI 843



 Score =  162 bits (411), Expect = 2e-37
 Identities = 96/291 (32%), Positives = 156/291 (53%)
 Frame = +2

Query: 38   LGNSLIDIYSKCGDLEGARSIFDMILEKDVFTWNTMIGGYTQAGYFGKAYDLFTRMQDSA 217
            L NS++  + KCG L  AR  F  + E+D  +WN MI GY Q G   +A  L   M +  
Sbjct: 217  LSNSILTAFVKCGKLSLARKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQG 276

Query: 218  VTPNVITWNVMISGYIRKGDEDQAMDLFQRMEADGTTKRNVASWNSLISGLLQNGQKNKA 397
              P ++T+N+MI+ Y + GD D  +DL ++ME+ G    +V +W S+ISG  Q+ + ++A
Sbjct: 277  FKPGLVTYNIMIASYSQLGDCDLVIDLKKKMESVGLAP-DVYTWTSMISGFSQSSRISQA 335

Query: 398  FRFLRQMQSCSTRPNSITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDA 577
              F ++M      PN+IT+ S   ACA+L + +   EIH   ++  +  ET V N+LID 
Sbjct: 336  LDFFKKMILAGVEPNTITIASATSACASLKSLQNGLEIHCFAIKMGIARETLVGNSLIDM 395

Query: 578  YAKSGNILYARVVFEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPNRGTF 757
            Y+K G +  AR VF+ +  +DV +WN+++ GY   G   +A  +F ++R     PN  T+
Sbjct: 396  YSKCGKLEAARHVFDTILEKDVYTWNSMIGGYCQAGYGGKAYELFMRLRESTVMPNVVTW 455

Query: 758  VSIILAYSLAGMVEQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHRLGE 910
             ++I      G  +Q       M  D  +   +  +++   L+   H+LGE
Sbjct: 456  NAMISGCIQNGDEDQAMDLFQIMEKDGGVKRNTASWNS---LIAGYHQLGE 503



 Score = 92.4 bits (228), Expect = 3e-16
 Identities = 60/229 (26%), Positives = 109/229 (47%)
 Frame = +2

Query: 248 MISGYIRKGDEDQAMDLFQRMEADGTTKRNVASWNSLISGLLQNGQKNKAFRFLRQMQSC 427
           ++S Y + G    A  +F     DG  +RN+ +W+++I    +  +  +       M   
Sbjct: 120 LVSMYAKCGCLKDARKVF-----DGMQERNLYTWSAMIGAYSREQRWKEVVELFFLMMGD 174

Query: 428 STRPNSITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYA 607
              P++     IL AC N    + VK IH  V+R  L     ++N+++ A+ K G +  A
Sbjct: 175 GVLPDAFLFPKILQACGNCEDLETVKLIHSLVIRCGLSCYMRLSNSILTAFVKCGKLSLA 234

Query: 608 RVVFEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPNRGTFVSIILAYSLA 787
           R  F ++  RD +SWN ++AGY   G  +EA  + + M   G KP   T+  +I +YS  
Sbjct: 235 RKFFGNMDERDGVSWNVMIAGYCQKGNGDEARRLLDTMSNQGFKPGLVTYNIMIASYSQL 294

Query: 788 GMVEQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHRLGEAVNFVEEM 934
           G  +     L        ++P    +++M+    +S R+ +A++F ++M
Sbjct: 295 GDCDL-VIDLKKKMESVGLAPDVYTWTSMISGFSQSSRISQALDFFKKM 342


>emb|CBI19766.3| unnamed protein product [Vitis vinifera]
          Length = 494

 Score =  506 bits (1302), Expect = e-141
 Identities = 241/370 (65%), Positives = 300/370 (81%)
 Frame = +2

Query: 2    LGVKLRSMGDVLLGNSLIDIYSKCGDLEGARSIFDMILEKDVFTWNTMIGGYTQAGYFGK 181
            + VK+  + D+L+GNSLID+YSK G+LE AR +FDMIL+KDV+TWN+MIGGY QAGY GK
Sbjct: 35   VAVKIGCVEDLLVGNSLIDMYSKSGELEDARRVFDMILKKDVYTWNSMIGGYCQAGYCGK 94

Query: 182  AYDLFTRMQDSAVTPNVITWNVMISGYIRKGDEDQAMDLFQRMEADGTTKRNVASWNSLI 361
            AYDLF +M +S V PNV+TWN MISGYI+ GDEDQAMDLF RME DG  KR+ ASWNSLI
Sbjct: 95   AYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLFHRMEKDGLIKRDTASWNSLI 154

Query: 362  SGLLQNGQKNKAFRFLRQMQSCSTRPNSITMLSILPACANLVATKKVKEIHGCVLRGRLQ 541
            +G LQNG KNKA    RQMQS   RPNS+TMLSILPACANLVA KKVKEIHGC+LR  L 
Sbjct: 155  AGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACANLVAAKKVKEIHGCILRRNLG 214

Query: 542  LETSVANTLIDAYAKSGNILYARVVFEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQM 721
             E SVAN LID YAKSGNI+YA+ +F+ + S+D+ISWN+L+AGYVLHGC + AL++F+QM
Sbjct: 215  SELSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISWNSLIAGYVLHGCSDSALDLFDQM 274

Query: 722  RLLGPKPNRGTFVSIILAYSLAGMVEQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHR 901
              +G KP+RGTF+SII A+SL+GMV++G    SSM  DYQI PG EH+SAM+DLLGRS +
Sbjct: 275  TKMGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMMEDYQILPGLEHHSAMIDLLGRSGK 334

Query: 902  LGEAVNFVEEMGIEQDYAIWDALLTASRVHGNIALAVRAAECLFDMGPKSVNIYRLLVQL 1081
            LGEA+ F+E+M IE D  IW ALLTAS++HGNI LA+RA ECL ++ P + +I++ ++Q+
Sbjct: 335  LGEAIEFIEDMAIEPDSCIWAALLTASKIHGNIGLAIRAGECLLELEPSNFSIHQQILQM 394

Query: 1082 YGLSGRSDDA 1111
            Y LSG+ +DA
Sbjct: 395  YALSGKFEDA 404



 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 65/239 (27%), Positives = 107/239 (44%), Gaps = 18/239 (7%)
 Frame = +2

Query: 437  PNSITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYARVV 616
            PN +T+ S + ACA+L A KK  E+H   ++     +  V N+LID Y+KSG +  AR V
Sbjct: 8    PNGVTVTSGISACASLKALKKGMELHSVAVKIGCVEDLLVGNSLIDMYSKSGELEDARRV 67

Query: 617  FEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPNRGTFVSIILAYSLAGMV 796
            F+ +  +DV +WN+++ GY   G   +A ++F +M      PN  T+ ++I  Y   G  
Sbjct: 68   FDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDE 127

Query: 797  EQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHRLGEAV-------------NFVEEMG 937
            +Q       M  D  I   +  +++++    ++    +A+             N V  + 
Sbjct: 128  DQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLS 187

Query: 938  IEQDYAIWDALLTASRVHG-----NIALAVRAAECLFDMGPKSVNIYRLLVQLYGLSGR 1099
            I    A   A      +HG     N+   +  A CL D   KS NI        G+S +
Sbjct: 188  ILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAKSGNIVYAQTIFQGISSK 246


>ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355517031|gb|AES98654.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  501 bits (1289), Expect = e-139
 Identities = 250/491 (50%), Positives = 341/491 (69%)
 Frame = +2

Query: 2    LGVKLRSMGDVLLGNSLIDIYSKCGDLEGARSIFDMILEKDVFTWNTMIGGYTQAGYFGK 181
            + VK+  + +VL+GNSLID+Y KCGDL+ A+ IFDM+ E+DV++WN++IGGY QAG+ GK
Sbjct: 379  IAVKMNLVDNVLVGNSLIDMYCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGK 438

Query: 182  AYDLFTRMQDSAVTPNVITWNVMISGYIRKGDEDQAMDLFQRMEADGTTKRNVASWNSLI 361
            A++LF +MQ+S   PN+ITWN+MI+GY++ G EDQA+DLF+ +E DG TKRN ASWNSLI
Sbjct: 439  AHELFMKMQESDSPPNIITWNIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLI 498

Query: 362  SGLLQNGQKNKAFRFLRQMQSCSTRPNSITMLSILPACANLVATKKVKEIHGCVLRGRLQ 541
            SG +Q+GQK+KA +  R MQ C   PNS+T+LSILP CANLVA+KKVKEIH   +R  L 
Sbjct: 499  SGFVQSGQKDKALQIFRNMQFCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILV 558

Query: 542  LETSVANTLIDAYAKSGNILYARVVFEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQM 721
             E SV+N LID+YAKSGN++Y++ +F  L  +D +SWN++++ YVLHGC   AL++F QM
Sbjct: 559  SELSVSNLLIDSYAKSGNLMYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQM 618

Query: 722  RLLGPKPNRGTFVSIILAYSLAGMVEQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHR 901
            R  G +PNRGTF SI+LAY  AGMV++G S  S +T DY +  G EHYSAM+ LLGRS +
Sbjct: 619  RKQGLQPNRGTFASILLAYGHAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGK 678

Query: 902  LGEAVNFVEEMGIEQDYAIWDALLTASRVHGNIALAVRAAECLFDMGPKSVNIYRLLVQL 1081
            L EA++F++ M IE + ++W ALLTA R+H N  +AV A + + +  P +     LL Q 
Sbjct: 679  LAEALDFIQSMPIEPNSSVWGALLTACRIHRNFGVAVLAGKRMLEFEPGNNITRHLLSQA 738

Query: 1082 YGLSGRSDDAVKVRKPQKWSGLEYSTGCSWIEMKNTVHTIGTGERSMTNSKRIYSQLARI 1261
            Y L G+ +       P+    +    G SWIE  N VHT   G++S     +++S L R+
Sbjct: 739  YSLCGKFE-------PEGEKAVNKPIGQSWIERNNVVHTFVVGDQSNPYLDKLHSWLKRV 791

Query: 1262 AEEIKIVLLYPHDTQLCIEDEEREEKCGFHSEKLALSFALISTPYSSQSIRIIKNCRMCG 1441
            A  +K    +  D +L IE+EE+E     HSEKLA +FALI      Q +RI+K  RMC 
Sbjct: 792  AVNVK---THVSDNELYIEEEEKENTSSVHSEKLAFAFALIDPHNKPQILRIVKKLRMCR 848

Query: 1442 DCHRTAKFISL 1474
            DCH TAK+IS+
Sbjct: 849  DCHDTAKYISM 859



 Score =  175 bits (444), Expect = 2e-41
 Identities = 113/399 (28%), Positives = 196/399 (49%), Gaps = 4/399 (1%)
 Frame = +2

Query: 38   LGNSLIDIYSKCGDLEGARSIFDMILEKDVFTWNTMIGGYTQAGYFGKAYDLFTRMQDSA 217
            L NS++ +Y+KCG+++ A+ IFD + E+D   WN MI G+ Q G  G+A   F  MQ   
Sbjct: 220  LRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDG 279

Query: 218  VTPNVITWNVMISGYIRKGDEDQAMDLFQRMEADGTTKRNVASWNSLISGLLQNGQKNKA 397
            V P+++TWN++IS Y + G  D A+DL ++ME  G    +V +W S+ISG  Q G+ + A
Sbjct: 280  VEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAP-DVYTWTSMISGFTQKGRISHA 338

Query: 398  FRFLRQMQSCSTRPNSITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDA 577
               L++M       N+IT+ S   ACA L +     EIH   ++  L     V N+LID 
Sbjct: 339  LDLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVLVGNSLIDM 398

Query: 578  YAKSGNILYARVVFEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPNRGTF 757
            Y K G++  A+ +F+ +  RDV SWN+++ GY   G   +A  +F +M+     PN  T+
Sbjct: 399  YCKCGDLKAAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITW 458

Query: 758  VSIILAYSLAGMVEQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHRLGEAVNFVEEMG 937
              +I  Y  +G  +Q      S+  D +    +  +++++    +S +  +A+     M 
Sbjct: 459  NIMITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQ 518

Query: 938  IEQDYAIWDALLTASRVHGNIALAVRAAE----CLFDMGPKSVNIYRLLVQLYGLSGRSD 1105
                      +L+   V  N+  + +  E     +  +    +++  LL+  Y  SG   
Sbjct: 519  FCHILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAKSGNLM 578

Query: 1106 DAVKVRKPQKWSGLEYSTGCSWIEMKNTVHTIGTGERSM 1222
             +  +     ++ L +    SW  M ++    G  E ++
Sbjct: 579  YSKNI-----FNELSWKDAVSWNSMLSSYVLHGCSESAL 612



 Score = 80.1 bits (196), Expect = 1e-12
 Identities = 51/229 (22%), Positives = 108/229 (47%)
 Frame = +2

Query: 248 MISGYIRKGDEDQAMDLFQRMEADGTTKRNVASWNSLISGLLQNGQKNKAFRFLRQMQSC 427
           ++S Y + G    A  +F  M       RN+ +W+++I G  +N    +       M   
Sbjct: 123 LVSMYAKCGLLGMARKVFNEMSV-----RNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRD 177

Query: 428 STRPNSITMLSILPACANLVATKKVKEIHGCVLRGRLQLETSVANTLIDAYAKSGNILYA 607
              P+   +  +L AC      +  + IH  V+R  ++    + N+++  YAK G +  A
Sbjct: 178 GVLPDEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCA 237

Query: 608 RVVFEHLPSRDVISWNTLMAGYVLHGCPNEALNIFEQMRLLGPKPNRGTFVSIILAYSLA 787
           + +F+ +  RD ++WN +++G+  +G   +A   F+ M+  G +P+  T+  +I  Y+  
Sbjct: 238 KKIFDCMDERDSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQL 297

Query: 788 GMVEQGNSTLSSMTNDYQISPGSEHYSAMLDLLGRSHRLGEAVNFVEEM 934
           G  +     +  M   + I+P    +++M+    +  R+  A++ ++EM
Sbjct: 298 GHCDLAIDLMRKM-EWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEM 345



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 59/278 (21%), Positives = 122/278 (43%), Gaps = 3/278 (1%)
 Frame = +2

Query: 323  TTKRNVASW-NSLISGLLQNGQKNKAFRFLRQMQSCSTRPNSITMLSILPACANLVATKK 499
            TTK ++    +S ++ L  NG  ++A   L  +     R   IT +++L +C +      
Sbjct: 42   TTKPSIRKLIDSQLNQLCINGSLSEAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFI 101

Query: 500  VKEIHGCVLRGRLQ-LETSVANTLIDAYAKSGNILYARVVFEHLPSRDVISWNTLMAGYV 676
             KE+H  +  G ++ +   V   L+  YAK G +  AR VF  +  R++ +W+ ++ G  
Sbjct: 102  GKELHSRI--GLVENVNPFVETKLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCS 159

Query: 677  LHGCPNEALNIFEQMRLLGPKPNRGTFVSIILAYSLAGMVEQGNSTLSSMTNDYQISPGS 856
             +    E + +F  M   G  P+      ++ A      +E G   + SM     +    
Sbjct: 160  RNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLETGR-LIHSMVIRRGMRWSK 218

Query: 857  EHYSAMLDLLGRSHRLGEAVNFVEEMGIEQDYAIWDALLTASRVHGNIALAVRAAECLFD 1036
               ++++ +  +   +  A    + M  E+D   W+A+++    +G I  A +  + +  
Sbjct: 219  HLRNSIMAVYAKCGEMDCAKKIFDCMD-ERDSVAWNAMISGFCQNGEIGQAQKYFDAMQK 277

Query: 1037 MGPK-SVNIYRLLVQLYGLSGRSDDAVKVRKPQKWSGL 1147
             G + S+  + +L+  Y   G  D A+ + +  +W G+
Sbjct: 278  DGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGI 315