BLASTX nr result

ID: Coptis25_contig00025613 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025613
         (1571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003608726.1| hypothetical protein MTR_4g101070 [Medicago ...    60   1e-06
emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]    60   1e-06
emb|CBI31915.3| unnamed protein product [Vitis vinifera]               60   2e-06
ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262...    60   2e-06
ref|XP_002528938.1| conserved hypothetical protein [Ricinus comm...    59   5e-06

>ref|XP_003608726.1| hypothetical protein MTR_4g101070 [Medicago truncatula]
            gi|355509781|gb|AES90923.1| hypothetical protein
            MTR_4g101070 [Medicago truncatula]
          Length = 752

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 87/361 (24%), Positives = 149/361 (41%), Gaps = 49/361 (13%)
 Frame = +3

Query: 171  KVEGSLLQRLKVSYLYGFDSHPQFSICRNPCYTIVAGCCLFSFVVLIQATYRSLFLK-KF 347
            KV   L   L   ++    S PQF + R+   T     C+ S + L++A  RS  +    
Sbjct: 200  KVTDKLRDELMKFWMMAHTSGPQFLLGRSVSCTASGAFCVLSTLTLLEAMLRSYLMSWSV 259

Query: 348  KDCGGVSTYSWSIWIIVMTQLLTIISGSLAASFRWFTLAFELKSADIGSGKEK------- 506
            K C G S Y WSI +I++ Q+  +  G++A +FRWF  A + +  ++     K       
Sbjct: 260  KFCAGESDYKWSIILILIVQVAAVGVGTIAPAFRWFA-AVKYRCPNVRERSRKRIFQVEG 318

Query: 507  ----ANTLIRNNPI---LGARSWVMCGYYLEVV--------GQFMLFVFYLVSIMMLSPF 641
                +  + R +PI   +G R +    + ++++           M+ V      + + P 
Sbjct: 319  YWTDSLVVFRESPISFRIGNRWFRKLAHDVKLIMLCFCIKLQMGMVRVCKAAQFVSIYPM 378

Query: 642  VVIRSWC------LNKY---------DNKEQIQEF-KHLIGIREKQLDGWTVRKASKDIN 773
            + I  +C       +K+           K+ ++ F  HL G  E++L    ++       
Sbjct: 379  LWILGFCEFFKNWKSKFGGIDSGLGTGRKQDLKRFILHLEG--EEELVEVMMKHNCDATA 436

Query: 774  RWTEVGKIEPPISLSQVLSRKSPSQQLHTRQVK-----DLVYP--GKEGIEVSSLSMVLL 932
             W E G+ + P  + ++L +K     LH  +       D + P  G E     SL +V L
Sbjct: 437  HWIEQGEKKQPKLVIELLEQK--CSMLHGFKGVGEFDCDQILPLHGVEPPYNWSLPIVTL 494

Query: 933  VRIATFSIPNK---LTKPLEQTFGEAYEAIDFIETRINSRSLKNRKKYKLTKAVWIGSGF 1103
              I   ++PN    L K L  T  EA   + FIE  I+    K  K  K ++ VW G+  
Sbjct: 495  ASIIV-ALPNMEKCLVKILISTVNEALPYVKFIENNIDKEG-KLIKLRKTSEIVWHGADL 552

Query: 1104 H 1106
            +
Sbjct: 553  Y 553


>emb|CAN71257.1| hypothetical protein VITISV_043224 [Vitis vinifera]
          Length = 754

 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +3

Query: 186 LLQRLKVSYLYGFDSHPQFSICRNPCYTIVAGCCLFSFVVLIQATYRSLFLK-KFKDCGG 362
           L + L   ++    S PQF I R+   T     CL S  +L++A  RS  +   FK C G
Sbjct: 207 LREDLMKYWIMAHSSXPQFVIGRSVTCTASGALCLLSAAILVEAWIRSYLMPWSFKFCSG 266

Query: 363 VSTYSWSIWIIVMTQLLTIISGSLAASFRWF 455
            S Y WS+ +I+++Q + +  G++  +FRWF
Sbjct: 267 ESDYKWSVTLILISQTVAVGVGTIGPAFRWF 297


>emb|CBI31915.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +3

Query: 186 LLQRLKVSYLYGFDSHPQFSICRNPCYTIVAGCCLFSFVVLIQATYRSLFLK-KFKDCGG 362
           L + L   ++    S PQF I R+   T     CL S  +L++A  RS  +   FK C G
Sbjct: 207 LREDLMKYWIMAHSSCPQFVIGRSVTCTASGALCLLSAAILVEAWIRSYLMPWSFKFCSG 266

Query: 363 VSTYSWSIWIIVMTQLLTIISGSLAASFRWF 455
            S Y WS+ +I+++Q + +  G++  +FRWF
Sbjct: 267 ESDYKWSVTLILISQTVAVGVGTIGPAFRWF 297


>ref|XP_002266701.1| PREDICTED: uncharacterized protein LOC100262529 [Vitis vinifera]
          Length = 754

 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 31/91 (34%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
 Frame = +3

Query: 186 LLQRLKVSYLYGFDSHPQFSICRNPCYTIVAGCCLFSFVVLIQATYRSLFLK-KFKDCGG 362
           L + L   ++    S PQF I R+   T     CL S  +L++A  RS  +   FK C G
Sbjct: 207 LREDLMKYWIMAHSSCPQFVIGRSVTCTASGALCLLSAAILVEAWIRSYLMPWSFKFCSG 266

Query: 363 VSTYSWSIWIIVMTQLLTIISGSLAASFRWF 455
            S Y WS+ +I+++Q + +  G++  +FRWF
Sbjct: 267 ESDYKWSVTLILISQTVAVGVGTIGPAFRWF 297


>ref|XP_002528938.1| conserved hypothetical protein [Ricinus communis]
           gi|223531640|gb|EEF33467.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 747

 Score = 58.5 bits (140), Expect = 5e-06
 Identities = 35/107 (32%), Positives = 52/107 (48%), Gaps = 1/107 (0%)
 Frame = +3

Query: 174 VEGSLLQRLKVSYLYGFDSHPQFSICRNPCYTIVAGCCLFSFVVLIQATYRSLFLK-KFK 350
           VE  L Q L   ++      PQF + R+   T     C  S + L +A  RS  +   FK
Sbjct: 203 VENKLRQDLMKYWMMAHTCSPQFVMGRSVTCTAAGALCFLSAMTLAEAMLRSYLMPWSFK 262

Query: 351 DCGGVSTYSWSIWIIVMTQLLTIISGSLAASFRWFTLAFELKSADIG 491
            C G S Y WS  ++++TQ + I  G++A + RWF+ A   +   IG
Sbjct: 263 FCTGESDYKWSALLVLITQTMAIGVGTIAPAIRWFS-AINFRCPTIG 308


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