BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025604
         (1430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Viti...   277   6e-72
ref|XP_002510047.1| DNA binding protein, putative [Ricinus commu...   263   8e-68
ref|XP_002302386.1| predicted protein [Populus trichocarpa] gi|2...   261   3e-67
ref|XP_002306505.1| predicted protein [Populus trichocarpa] gi|2...   258   3e-66
ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like ...   244   3e-62

>ref|XP_002285475.1| PREDICTED: transcription factor bHLH74 [Vitis vinifera]
            gi|302142156|emb|CBI19359.3| unnamed protein product
            [Vitis vinifera]
          Length = 430

 Score =  277 bits (708), Expect = 6e-72
 Identities = 168/326 (51%), Positives = 216/326 (66%), Gaps = 16/326 (4%)
 Frame = -2

Query: 1426 HTQRYSVDPSLVELSPNL-----SNFSAMVSSFGLSEYNQITNF-TSPDYPSAKEHGINK 1265
            H   Y  + SLVE+ P L      +FS MV+SFGL E  Q  N    P++P  KE     
Sbjct: 102  HLVLYPSNSSLVEMVPKLPCFGSGSFSEMVASFGLPECGQTANSGCPPNFPPNKEG---- 157

Query: 1264 ISRKAGNQGAVIQGDIQNSHEGGNGSSPDSMKRKRAPDFCSGITHSQFQGGDAEL----E 1097
            ++ K+ N GA  Q   Q S      +SP   +RK + D    +  S+   G+       E
Sbjct: 158  LTEKSLN-GAQSQEGHQISEGDAVDASPSGKRRKSSFDPRPPLNTSKSADGEQPKGLPWE 216

Query: 1096 SVAGLKEQDGKKQKTEKN--PGSRGKSTGKQAKDSSQNEQSSKDDYIHVRARRGQATNSH 923
            +    KEQ+ KK K ++N  P  RGK   K AKD+S N ++ K++YIHVRARRGQATNSH
Sbjct: 217  NSEFSKEQEEKKLKIDQNMSPNLRGKQPNKHAKDNSSNGEAPKENYIHVRARRGQATNSH 276

Query: 922  SLAERVRREKISQRMKYLQDLVPGCDKITGKALMLDEIINYVQSLQRQVEFLSMKLSTVN 743
            SLAERVRREKIS+RM+ LQ+LVPGC+KITGKA+MLDEIINYVQSLQ+QVEFLSMKL+TVN
Sbjct: 277  SLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 336

Query: 742  PELSVDIEQIISKDILCSRVGGSTILGFGPGISLSHTHPH-ISQGSVDGQLHPVPQI--- 575
            PEL++DIE+++SKDIL SR G +++LGFGPG+S SH +PH ISQG++ G   P PQ    
Sbjct: 337  PELNIDIERLLSKDILNSRGGSTSVLGFGPGMSSSHPYPHGISQGTLPG--IPTPQFHST 394

Query: 574  PTIWDDEFQNLIQMGLMPNPALESLG 497
              +WD E Q+L+QMG   NP+  +LG
Sbjct: 395  QAVWDGELQSLLQMGFDSNPSSNNLG 420


>ref|XP_002510047.1| DNA binding protein, putative [Ricinus communis]
            gi|223550748|gb|EEF52234.1| DNA binding protein, putative
            [Ricinus communis]
          Length = 408

 Score =  263 bits (672), Expect = 8e-68
 Identities = 163/335 (48%), Positives = 214/335 (63%), Gaps = 20/335 (5%)
 Frame = -2

Query: 1426 HTQRYSVDPSLVELSPNL-----SNFSAMVSSFGLSEYNQITNFTSPDYPSAKEHGINKI 1262
            H   Y  D S VEL P        +FS MVSSFGL++  QI+N  S  +P+   +     
Sbjct: 79   HLVHYQSDSSYVELVPKFPSYGSGSFSEMVSSFGLTDCGQISN--SGCHPNYTSNSAANN 136

Query: 1261 SRKAGNQGAVIQGDIQNSHEGGNGSSPDSMKRKRAPDFCSGIT--------HSQFQGGDA 1106
             R   N  A+ Q D Q S E   G SPD  +RKR  +  S           H    G  +
Sbjct: 137  ERTITNS-ALSQEDHQLSEEPVVGVSPDGKRRKRLAEPSSPFDPNKNAEEMHKDPSGNSS 195

Query: 1105 ELESVAGLKEQDGKKQKTEKNPGS--RGKSTGKQAKDSSQNEQSSKDDYIHVRARRGQAT 932
            ++      KEQD KK +TE+N  +  RGK   KQAK++S + ++ K++YIHVRARRGQAT
Sbjct: 196  DIP-----KEQDEKKSRTEQNTAANLRGKQAAKQAKENSHSGEAPKENYIHVRARRGQAT 250

Query: 931  NSHSLAERVRREKISQRMKYLQDLVPGCDKITGKALMLDEIINYVQSLQRQVEFLSMKLS 752
            NSHSLAERVRREKIS+RM+ LQ+LVPGC+KITGKA+MLDEIINYVQSLQ+QVEFLSMKL+
Sbjct: 251  NSHSLAERVRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLA 310

Query: 751  TVNPELSVDIEQIISKDILCSRVGGSTILGFGPGISLSHTHPH-ISQGSVDGQLHPVPQI 575
            TVNPEL++DIE+I+SKDIL SR G + I+G  PGI+ +H + H I   ++    +  PQ 
Sbjct: 311  TVNPELNIDIERILSKDILHSRGGNAAIMGLSPGIN-AHPYSHGIFPPNIPVIPNTNPQF 369

Query: 574  P----TIWDDEFQNLIQMGLMPNPALESLGLDGKV 482
            P    T+ +++ QNL QMG     A++SLG +G++
Sbjct: 370  PPMPHTVLENDLQNLFQMGFDSGSAIDSLGPNGRL 404


>ref|XP_002302386.1| predicted protein [Populus trichocarpa] gi|222844112|gb|EEE81659.1|
            predicted protein [Populus trichocarpa]
          Length = 330

 Score =  261 bits (667), Expect = 3e-67
 Identities = 164/324 (50%), Positives = 204/324 (62%), Gaps = 18/324 (5%)
 Frame = -2

Query: 1414 YSVDPSLVELSPNL-----SNFSAMVSSFGLSEYNQITNFTSPDYPSAKEHGINKISRKA 1250
            Y      VEL P        NFS MV S GL+E  QIT+   P             +++A
Sbjct: 12   YPSGSGFVELVPKFPGFGSGNFSEMVGSLGLTECGQITHTGCPP----------NYNKEA 61

Query: 1249 GNQGAVIQGDIQNSHEGGNGSSPDSMKRKRAPDFCSGITHSQFQGG----DAELESVAGL 1082
             N  A  Q D Q S E   G+SP+  +RKR P+  S +  ++   G    D   ES    
Sbjct: 62   NN--AQHQEDQQLSEETSIGASPNGKRRKRVPESNSPLDPNKNTEGELRKDLSGESCDIA 119

Query: 1081 KEQDGKKQKTEKNPGS--RGKSTGKQAKDSSQNEQSSKDDYIHVRARRGQATNSHSLAER 908
            KE D K QKTE+NPG   RGK   KQAKD +Q+ +  K++Y HVRARRGQATNSHSLAER
Sbjct: 120  KELDEKTQKTEQNPGPNLRGKQAAKQAKDDTQSGEVPKENYFHVRARRGQATNSHSLAER 179

Query: 907  VRREKISQRMKYLQDLVPGCDKITGKALMLDEIINYVQSLQRQVEFLSMKLSTVNPELSV 728
            VRREKIS+RM+ LQ+LVPGC+KITGKA+MLDEIINYVQSLQ+QVEFLSMKL+TVNPEL +
Sbjct: 180  VRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVNPELQI 239

Query: 727  DIEQIISKDILCSRVGGSTILGFGPGISLSHTHPH-ISQGSV------DGQLHPVPQIPT 569
            D+E+I+SKDIL SR G + ILGF PGIS SH + H I Q  +      + Q  P P    
Sbjct: 240  DVERILSKDILHSRGGNAAILGFSPGIS-SHPYSHRIFQPGIQVIPNSNPQFSPAPH--A 296

Query: 568  IWDDEFQNLIQMGLMPNPALESLG 497
            + D+E Q+  QMG   + A+++LG
Sbjct: 297  VLDNELQSYFQMGFDSSSAIDNLG 320


>ref|XP_002306505.1| predicted protein [Populus trichocarpa] gi|222855954|gb|EEE93501.1|
            predicted protein [Populus trichocarpa]
          Length = 407

 Score =  258 bits (659), Expect = 3e-66
 Identities = 165/327 (50%), Positives = 204/327 (62%), Gaps = 16/327 (4%)
 Frame = -2

Query: 1429 CHTQRYSVDPSLVELSPNL-----SNFSAMVSSFGLSEYNQITNFTSPDYPSAKEHGINK 1265
            CH   Y  D   VEL P        NFS MV S GL+E  QI N   P  P+ KE     
Sbjct: 79   CHLVHYPSDSGFVELVPKFPGFGSGNFSEMVGSVGLTECGQIVNAGCP--PNYKE----- 131

Query: 1264 ISRKAGNQGAVIQGDIQNSHEGGNGSSPDSMKRKRAPDFCSGITHSQFQGG----DAELE 1097
             + ++   GA  + D Q S E   G+ P+  +R+   +  S    ++   G    D   E
Sbjct: 132  ANNESTAHGAQREEDQQLSEETTIGALPNGKRRRLVAESNSPFDPNKNAEGEFQKDPSGE 191

Query: 1096 SVAGLKEQDGKKQKTEKNPGS--RGKSTGKQAKDSSQNEQSSKDDYIHVRARRGQATNSH 923
            S    KE D KKQK E+N  +  RGK   KQAKD+ Q+ ++ KDDYIHVRARRGQATNSH
Sbjct: 192  SSDIAKELDEKKQKIEQNCSANLRGKQVAKQAKDNPQSGEAPKDDYIHVRARRGQATNSH 251

Query: 922  SLAERVRREKISQRMKYLQDLVPGCDKITGKALMLDEIINYVQSLQRQVEFLSMKLSTVN 743
            SLAERVRREKIS+RM+ LQ+LVPGC+KITGKA+MLDEIINYVQSLQ+QVEFLSMKL+TVN
Sbjct: 252  SLAERVRREKISERMRMLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLSMKLATVN 311

Query: 742  PELSVDIEQIISKDILCSRVGGSTILGFGPGISLSHTHPH-ISQGSVDGQLHPVPQIP-- 572
            PEL  D+E+I SKDIL SR G + ILGF PGI+ SH + H I Q  +   L+  PQ    
Sbjct: 312  PELYNDVEKIQSKDILHSRGGNAAILGFSPGIN-SHQYSHGIFQPGIPVILNSNPQFSPA 370

Query: 571  --TIWDDEFQNLIQMGLMPNPALESLG 497
               + D+E Q+  QMG   + A++SLG
Sbjct: 371  HHAVLDNELQSFFQMGFDSSSAVDSLG 397


>ref|XP_003634844.1| PREDICTED: transcription factor bHLH74-like [Vitis vinifera]
            gi|296090643|emb|CBI41042.3| unnamed protein product
            [Vitis vinifera]
          Length = 415

 Score =  244 bits (624), Expect = 3e-62
 Identities = 154/329 (46%), Positives = 202/329 (61%), Gaps = 16/329 (4%)
 Frame = -2

Query: 1426 HTQRYSVDPSLVELSPNLSNFSA-----MVSSFGLSEYNQITNFTSPDYPSAKEHGINKI 1262
            H  +YS DP  VEL PN  +FS      MV+   L + + I     PD+P  K +G  K 
Sbjct: 87   HLTQYSSDPRFVELVPNFPHFSTAGFSEMVTPRCLPKCHNIG--CPPDHPLEK-NGTRKT 143

Query: 1261 S--RKAGNQGAVIQGDIQNSHEGGNGSSPDSMKRKRAPDFCSGITHSQFQGGDAELESVA 1088
            S  +   N  A ++G  Q + +G    SP   KRKR  D  S   H   +  +A      
Sbjct: 144  SNLQNKTNNCAQMEG-CQIADDGTMELSPIEKKRKRLADDRSQFAH--LKNMEAAQPKDE 200

Query: 1087 GLKEQDGKKQKTEKN--PGSRGKSTGKQAKDSSQNEQSSKDDYIHVRARRGQATNSHSLA 914
             L  QD +KQK E+     + GK  G + K SSQ  ++ K+DYIHVRA+RGQATNSHSLA
Sbjct: 201  CLGRQDERKQKAEQKIVANNCGKLIGAEVKMSSQTGEAPKEDYIHVRAKRGQATNSHSLA 260

Query: 913  ERVRREKISQRMKYLQDLVPGCDKITGKALMLDEIINYVQSLQRQVEFLSMKLSTVNPEL 734
            ERVRRE+IS+RMK+LQDLVPGC+KITGKA+MLDEIINYVQSLQRQVEFLSMKL+TV PE+
Sbjct: 261  ERVRRERISERMKFLQDLVPGCNKITGKAVMLDEIINYVQSLQRQVEFLSMKLATVYPEM 320

Query: 733  SVDIEQIISKDILCSRVGGSTILGFGPGISLSHTHPHISQGSVDG-------QLHPVPQI 575
            +V IE+I+S DI  S+ G + ILGFGPG++ ++  P ++  ++         Q  P+  +
Sbjct: 321  NVQIERILSSDIHHSKGGTAPILGFGPGMNSAYPIPQVTLQAISPAIESSTLQSSPMSPM 380

Query: 574  PTIWDDEFQNLIQMGLMPNPALESLGLDG 488
            P +WD+E Q + QMG      LE+L   G
Sbjct: 381  PNVWDNELQGIKQMGFTSTADLENLETSG 409