BLASTX nr result

ID: Coptis25_contig00025591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025591
         (674 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330652.1| predicted protein [Populus trichocarpa] gi|2...   277   2e-72
ref|XP_002531896.1| conserved hypothetical protein [Ricinus comm...   276   3e-72
ref|XP_002273984.2| PREDICTED: C2 and GRAM domain-containing pro...   275   6e-72
ref|XP_003528491.1| PREDICTED: C2 and GRAM domain-containing pro...   265   6e-69
ref|XP_003608069.1| GRAM domain-containing protein [Medicago tru...   263   2e-68

>ref|XP_002330652.1| predicted protein [Populus trichocarpa] gi|222872256|gb|EEF09387.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score =  277 bits (708), Expect = 2e-72
 Identities = 134/183 (73%), Positives = 151/183 (82%), Gaps = 5/183 (2%)
 Frame = -1

Query: 536 LNVLFPSWWEIMISIAAAIFLVAMIWFFS-----SGDGNSSRCHNSVDICGDLLDDKDKM 372
           L+ L PSWWEI +++AAA+F++    FFS      GDG        ++  GD +D+KDKM
Sbjct: 7   LDFLVPSWWEIKVTVAAAMFVILSFCFFSWSGGGGGDGGGGDRAVVLENSGDGIDEKDKM 66

Query: 371 GHFKGDSQSNSTYVIKLELLAAKNLIGANLNGTSDPYAIITCGEQKRFSSMVPGSRNPMW 192
           G  KGDSQ+NS Y+IKLELLAAKNLIGANLNGTSDPYAIITCG +KRFSSMVPGSRNPMW
Sbjct: 67  GQLKGDSQANSAYIIKLELLAAKNLIGANLNGTSDPYAIITCGSEKRFSSMVPGSRNPMW 126

Query: 191 GEEFNFFVNELPVQVNVTIYDWDIIWKSTVLGSVTVPVEGEGQTGALWHTLDSPSGQVCL 12
           GEEFNF V+ELPVQ+NVTIYDWDIIWKS VLGSVTVPVE EGQTGA W+TLDSPSGQVCL
Sbjct: 127 GEEFNFSVDELPVQINVTIYDWDIIWKSAVLGSVTVPVESEGQTGAEWYTLDSPSGQVCL 186

Query: 11  HIK 3
           HIK
Sbjct: 187 HIK 189


>ref|XP_002531896.1| conserved hypothetical protein [Ricinus communis]
           gi|223528463|gb|EEF30495.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 532

 Score =  276 bits (706), Expect = 3e-72
 Identities = 135/197 (68%), Positives = 154/197 (78%), Gaps = 12/197 (6%)
 Frame = -1

Query: 557 IKMTEIILNVLFPSWWEIMISIAAAIFLVAMIWFFS------------SGDGNSSRCHNS 414
           + M + +L+ L PSWWEI +++AAA+F+++  WF S             G   S    NS
Sbjct: 3   VMMMDSVLDFLVPSWWEIKVTVAAAVFVMSSYWFLSWSGGAGGGDIDGGGTDRSQMLENS 62

Query: 413 VDICGDLLDDKDKMGHFKGDSQSNSTYVIKLELLAAKNLIGANLNGTSDPYAIITCGEQK 234
            +  GD +DDK KMG  KGD Q NS Y+IKLELLAAKNLIGANLNGTSDPYAIITCG +K
Sbjct: 63  GN-SGDGIDDKFKMGQLKGDPQGNSAYIIKLELLAAKNLIGANLNGTSDPYAIITCGSEK 121

Query: 233 RFSSMVPGSRNPMWGEEFNFFVNELPVQVNVTIYDWDIIWKSTVLGSVTVPVEGEGQTGA 54
           RFSSMVPGSRNPMWGEEFNF V+ELPVQ+ VTIYDWDIIWKSTVLGSVTVPVE EGQTGA
Sbjct: 122 RFSSMVPGSRNPMWGEEFNFSVDELPVQIQVTIYDWDIIWKSTVLGSVTVPVESEGQTGA 181

Query: 53  LWHTLDSPSGQVCLHIK 3
           +W+TLDSPSGQVCLHIK
Sbjct: 182 VWYTLDSPSGQVCLHIK 198


>ref|XP_002273984.2| PREDICTED: C2 and GRAM domain-containing protein At1g03370-like
           [Vitis vinifera] gi|296084286|emb|CBI24674.3| unnamed
           protein product [Vitis vinifera]
          Length = 588

 Score =  275 bits (703), Expect = 6e-72
 Identities = 131/188 (69%), Positives = 154/188 (81%), Gaps = 3/188 (1%)
 Frame = -1

Query: 557 IKMTEIILNVLFPSWWEIMISIAAAIFLVAMIWFFSSGDGN---SSRCHNSVDICGDLLD 387
           ++M E  L+ L P+WWE+ IS+ AA+F++   WFF+ G+G    S      +   GDL+D
Sbjct: 1   MEMIEEALHFLVPTWWEVEISVVAAVFVIITYWFFTFGNGEIDESQATGEGLIGAGDLID 60

Query: 386 DKDKMGHFKGDSQSNSTYVIKLELLAAKNLIGANLNGTSDPYAIITCGEQKRFSSMVPGS 207
           D  KMG  KGD Q+NS YVIKLELLAAKNLIGANLNG SDPYAIITCGE+KRFSSMVPGS
Sbjct: 61  DNVKMGQLKGDPQTNSAYVIKLELLAAKNLIGANLNGMSDPYAIITCGEEKRFSSMVPGS 120

Query: 206 RNPMWGEEFNFFVNELPVQVNVTIYDWDIIWKSTVLGSVTVPVEGEGQTGALWHTLDSPS 27
           RNPMWGEEFNF V++LPV++NVTIYDWDIIWKST+LGSVTVPVE EGQTGA+W++LDS S
Sbjct: 121 RNPMWGEEFNFSVDDLPVKINVTIYDWDIIWKSTILGSVTVPVETEGQTGAVWYSLDSTS 180

Query: 26  GQVCLHIK 3
           GQVCLHIK
Sbjct: 181 GQVCLHIK 188


>ref|XP_003528491.1| PREDICTED: C2 and GRAM domain-containing protein At1g03370-like
           [Glycine max]
          Length = 585

 Score =  265 bits (677), Expect = 6e-69
 Identities = 129/188 (68%), Positives = 153/188 (81%), Gaps = 2/188 (1%)
 Frame = -1

Query: 560 SIKMTEIILNVLFPSWWEIMISIAAAIFLVAMIWFFS--SGDGNSSRCHNSVDICGDLLD 387
           ++ +   +   LFPS WEI +++AA++F++    FF+  +G  + S   NS    GD+ D
Sbjct: 2   NVTVDSALFAFLFPSAWEIKVAVAASVFVILAYRFFAVRTGYADPSLTDNSA---GDVAD 58

Query: 386 DKDKMGHFKGDSQSNSTYVIKLELLAAKNLIGANLNGTSDPYAIITCGEQKRFSSMVPGS 207
           +KDKMG  K DSQ++  Y+IKLELLAAKNL+GANLNGTSDPYAIITCG +KRFSSMVPGS
Sbjct: 59  EKDKMGQSKVDSQASLAYLIKLELLAAKNLVGANLNGTSDPYAIITCGNEKRFSSMVPGS 118

Query: 206 RNPMWGEEFNFFVNELPVQVNVTIYDWDIIWKSTVLGSVTVPVEGEGQTGALWHTLDSPS 27
           RNPMWGEEFNF V+ELPVQ+NVTIYDWDIIWKS VLGSVTVPVE EGQTGA+WHTLDSPS
Sbjct: 119 RNPMWGEEFNFSVDELPVQINVTIYDWDIIWKSAVLGSVTVPVESEGQTGAVWHTLDSPS 178

Query: 26  GQVCLHIK 3
           GQVCLHIK
Sbjct: 179 GQVCLHIK 186


>ref|XP_003608069.1| GRAM domain-containing protein [Medicago truncatula]
           gi|355509124|gb|AES90266.1| GRAM domain-containing
           protein [Medicago truncatula]
          Length = 453

 Score =  263 bits (673), Expect = 2e-68
 Identities = 129/181 (71%), Positives = 147/181 (81%), Gaps = 2/181 (1%)
 Frame = -1

Query: 539 ILNVLFPSWWEIMISIAAAIFLVAMIWFFSS--GDGNSSRCHNSVDICGDLLDDKDKMGH 366
           +L  L PS WEI ++ AA++F++   WFF+    D +S R   S +  GD  DDK K+G 
Sbjct: 5   VLGFLIPSLWEIEVAFAASLFVILAYWFFTFRIADRHSDRSL-SENSAGDSADDKVKIGQ 63

Query: 365 FKGDSQSNSTYVIKLELLAAKNLIGANLNGTSDPYAIITCGEQKRFSSMVPGSRNPMWGE 186
            +GDSQ+ S Y+IKLELLAAKNLI ANLNGTSDPY IITCG +KRFSSMVPGSRNPMWGE
Sbjct: 64  SRGDSQAGSAYLIKLELLAAKNLIAANLNGTSDPYTIITCGNEKRFSSMVPGSRNPMWGE 123

Query: 185 EFNFFVNELPVQVNVTIYDWDIIWKSTVLGSVTVPVEGEGQTGALWHTLDSPSGQVCLHI 6
           EFNF V+ELPVQ+NVTIYDWDIIWKS VLGSVTVPVE EGQTGA+WHTLDSPSGQVCLHI
Sbjct: 124 EFNFSVDELPVQINVTIYDWDIIWKSAVLGSVTVPVESEGQTGAVWHTLDSPSGQVCLHI 183

Query: 5   K 3
           K
Sbjct: 184 K 184


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