BLASTX nr result

ID: Coptis25_contig00025586 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025586
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527904.1| conserved hypothetical protein [Ricinus comm...   164   7e-39
ref|XP_002315678.1| predicted protein [Populus trichocarpa] gi|2...   164   9e-39
emb|CAN78442.1| hypothetical protein VITISV_016799 [Vitis vinifera]   164   9e-39
ref|XP_002312681.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002278355.2| PREDICTED: uncharacterized protein LOC100246...   160   1e-37

>ref|XP_002527904.1| conserved hypothetical protein [Ricinus communis]
           gi|223532679|gb|EEF34461.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 369

 Score =  164 bits (415), Expect = 7e-39
 Identities = 69/85 (81%), Positives = 82/85 (96%)
 Frame = +2

Query: 2   GHWWLEFGHGLLVGYWPSFIFSHLRNHANMIQFGGEVVNTRPSGFHTYTQMGSGQFAGQG 181
           G+WWLEFG+G+LVGYWPSF+F+HLR+HA+M+QFGGEVVN+RPSGFHT TQMGSG FAG+G
Sbjct: 249 GNWWLEFGNGVLVGYWPSFLFTHLRDHASMVQFGGEVVNSRPSGFHTSTQMGSGHFAGEG 308

Query: 182 FGKASYFRNMQVVDWDNNLLPTSNI 256
           FGKASYFRN+QVVDWDNNL+P SN+
Sbjct: 309 FGKASYFRNLQVVDWDNNLIPLSNL 333


>ref|XP_002315678.1| predicted protein [Populus trichocarpa] gi|222864718|gb|EEF01849.1|
           predicted protein [Populus trichocarpa]
          Length = 466

 Score =  164 bits (414), Expect = 9e-39
 Identities = 68/85 (80%), Positives = 82/85 (96%)
 Frame = +2

Query: 2   GHWWLEFGHGLLVGYWPSFIFSHLRNHANMIQFGGEVVNTRPSGFHTYTQMGSGQFAGQG 181
           G+WWLEFG+G+LVGYWPSF+F+HLR+HA+M+QFGGE+VN+RPSGFHT TQMGSG FAG+G
Sbjct: 346 GNWWLEFGNGVLVGYWPSFLFTHLRDHASMVQFGGEIVNSRPSGFHTSTQMGSGHFAGEG 405

Query: 182 FGKASYFRNMQVVDWDNNLLPTSNI 256
           FGKASYFRN+QVVDWDNNL+P SN+
Sbjct: 406 FGKASYFRNLQVVDWDNNLIPLSNL 430


>emb|CAN78442.1| hypothetical protein VITISV_016799 [Vitis vinifera]
          Length = 443

 Score =  164 bits (414), Expect = 9e-39
 Identities = 69/85 (81%), Positives = 81/85 (95%)
 Frame = +2

Query: 2   GHWWLEFGHGLLVGYWPSFIFSHLRNHANMIQFGGEVVNTRPSGFHTYTQMGSGQFAGQG 181
           G+WWLEFG G+LVGYWPSF+F+HLRNHA+M+Q+GGEVVNTRPSGFHT TQMGSG FAG+G
Sbjct: 323 GNWWLEFGSGVLVGYWPSFLFTHLRNHASMVQYGGEVVNTRPSGFHTSTQMGSGHFAGEG 382

Query: 182 FGKASYFRNMQVVDWDNNLLPTSNI 256
           FGKASYFRN+QVVDWDN+L+P SN+
Sbjct: 383 FGKASYFRNLQVVDWDNSLIPLSNL 407


>ref|XP_002312681.1| predicted protein [Populus trichocarpa] gi|222852501|gb|EEE90048.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score =  162 bits (410), Expect = 3e-38
 Identities = 68/85 (80%), Positives = 81/85 (95%)
 Frame = +2

Query: 2   GHWWLEFGHGLLVGYWPSFIFSHLRNHANMIQFGGEVVNTRPSGFHTYTQMGSGQFAGQG 181
           G+WWLEFG+G+LVGYWPSF+F+HLR+HA+M+QFGGE+VN+ PSGFHT TQMGSG FAG+G
Sbjct: 296 GNWWLEFGNGVLVGYWPSFLFTHLRDHASMVQFGGEIVNSMPSGFHTSTQMGSGHFAGEG 355

Query: 182 FGKASYFRNMQVVDWDNNLLPTSNI 256
           FGKASYFRN+QVVDWDNNLLP SN+
Sbjct: 356 FGKASYFRNLQVVDWDNNLLPLSNL 380


>ref|XP_002278355.2| PREDICTED: uncharacterized protein LOC100246848 [Vitis vinifera]
          Length = 419

 Score =  160 bits (404), Expect = 1e-37
 Identities = 69/85 (81%), Positives = 77/85 (90%)
 Frame = +2

Query: 2   GHWWLEFGHGLLVGYWPSFIFSHLRNHANMIQFGGEVVNTRPSGFHTYTQMGSGQFAGQG 181
           GHWWLE+G GLLVGYWPSF+FSHL NHANMIQFGGE+VNTR +GFHT TQMGSG FA +G
Sbjct: 299 GHWWLEYGSGLLVGYWPSFLFSHLGNHANMIQFGGEIVNTRSTGFHTSTQMGSGHFAEEG 358

Query: 182 FGKASYFRNMQVVDWDNNLLPTSNI 256
           FGKASYFRN+QVVDWDN+LLP  N+
Sbjct: 359 FGKASYFRNLQVVDWDNSLLPLQNL 383


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