BLASTX nr result

ID: Coptis25_contig00025560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025560
         (719 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267727.1| PREDICTED: uncharacterized protein LOC100247...   107   3e-21
gb|AFK46439.1| unknown [Medicago truncatula]                          103   5e-20
ref|XP_002300278.1| predicted protein [Populus trichocarpa] gi|2...    99   7e-19
ref|XP_003598224.1| hypothetical protein MTR_3g008630 [Medicago ...    98   1e-18
ref|XP_002522144.1| conserved hypothetical protein [Ricinus comm...    94   3e-17

>ref|XP_002267727.1| PREDICTED: uncharacterized protein LOC100247999 [Vitis vinifera]
           gi|147827576|emb|CAN66219.1| hypothetical protein
           VITISV_024778 [Vitis vinifera]
           gi|296083029|emb|CBI22433.3| unnamed protein product
           [Vitis vinifera]
          Length = 119

 Score =  107 bits (266), Expect = 3e-21
 Identities = 66/129 (51%), Positives = 79/129 (61%), Gaps = 1/129 (0%)
 Frame = +3

Query: 141 EAIVALHMASVSAVLTLHGGDQGGKTRTIHPVLRKTEL-RRRGLLLSVIFGSSTALSAQA 317
           +A+ +L   +   V  +HGG   G   T     R TE+ RR GLLLS +  +S     Q 
Sbjct: 3   QAVNSLSKFASQNVQAIHGGKGKGSITT-----RTTEIGRRSGLLLSSVLAAS-----QV 52

Query: 318 DDSRTALLQKYLKKSEEXXXXXXXXXXXXFYKRNYKDYFEFMKGSLEGKKEEQLTESEKG 497
            DSRT LL+KYLKKSEE            FYKRNYKDYFEF++GSL GK  EQL+ESEKG
Sbjct: 53  SDSRTELLKKYLKKSEENKAKNDKERLDSFYKRNYKDYFEFVEGSLAGK--EQLSESEKG 110

Query: 498 ILEWLKTNK 524
           IL+WLK NK
Sbjct: 111 ILDWLKKNK 119


>gb|AFK46439.1| unknown [Medicago truncatula]
          Length = 131

 Score =  103 bits (256), Expect = 5e-20
 Identities = 54/101 (53%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
 Frame = +3

Query: 228 HPVLRKTELR--RRGLLLSVIFGSSTALSAQADDSRTALLQKYLKKSEEXXXXXXXXXXX 401
           +P LR T L   RRGL+LS +     A + Q  +SRT LLQKYLKK+EE           
Sbjct: 34  NPTLRSTNLEFGRRGLVLSTVIA---ATATQDPESRTLLLQKYLKKTEENKEKNDKERVD 90

Query: 402 XFYKRNYKDYFEFMKGSLEGKKEEQLTESEKGILEWLKTNK 524
            +YKRNYKDYFEF++G L+GK+E +L+E+EKGIL+WLK NK
Sbjct: 91  SYYKRNYKDYFEFVEGGLQGKEEGKLSEAEKGILDWLKANK 131


>ref|XP_002300278.1| predicted protein [Populus trichocarpa] gi|222847536|gb|EEE85083.1|
           predicted protein [Populus trichocarpa]
          Length = 135

 Score = 99.4 bits (246), Expect = 7e-19
 Identities = 50/95 (52%), Positives = 65/95 (68%)
 Frame = +3

Query: 240 RKTELRRRGLLLSVIFGSSTALSAQADDSRTALLQKYLKKSEEXXXXXXXXXXXXFYKRN 419
           R  ++ RRG+LLS + G  +      +DSR  LL+KYLKKSE+            +YKRN
Sbjct: 46  RAADIGRRGVLLSTVVGVYSV-----NDSRIELLKKYLKKSEDNKTKNDKERMDSYYKRN 100

Query: 420 YKDYFEFMKGSLEGKKEEQLTESEKGILEWLKTNK 524
           YKDYF+F++GSL+GK E+ LTESEKGIL+WLK NK
Sbjct: 101 YKDYFDFVEGSLKGKNEQDLTESEKGILDWLKKNK 135


>ref|XP_003598224.1| hypothetical protein MTR_3g008630 [Medicago truncatula]
           gi|355487272|gb|AES68475.1| hypothetical protein
           MTR_3g008630 [Medicago truncatula]
          Length = 124

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 52/101 (51%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
 Frame = +3

Query: 228 HPVLRKT--ELRRRGLLLSVIFGSSTALSAQADDSRTALLQKYLKKSEEXXXXXXXXXXX 401
           +P LR T  E  RRGL+LS++     A + Q  +SRT LLQKYLKK++E           
Sbjct: 27  NPTLRSTNMEFGRRGLVLSIVIA---ATATQDPESRTLLLQKYLKKTQENKEKNDKERVD 83

Query: 402 XFYKRNYKDYFEFMKGSLEGKKEEQLTESEKGILEWLKTNK 524
             YKRNYKDYFEF++G L+ K+E +L+E+EKGIL+WLK NK
Sbjct: 84  SNYKRNYKDYFEFIEGGLQAKEEGKLSEAEKGILDWLKANK 124


>ref|XP_002522144.1| conserved hypothetical protein [Ricinus communis]
           gi|223538743|gb|EEF40344.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 135

 Score = 94.0 bits (232), Expect = 3e-17
 Identities = 47/89 (52%), Positives = 60/89 (67%)
 Frame = +3

Query: 258 RRGLLLSVIFGSSTALSAQADDSRTALLQKYLKKSEEXXXXXXXXXXXXFYKRNYKDYFE 437
           RRG+LLS +  +        +DS+T LL+KYLKKSEE            +YKRNYKDYF+
Sbjct: 52  RRGILLSALVAAYPV-----NDSKTELLKKYLKKSEENRTKNDKERLDSYYKRNYKDYFD 106

Query: 438 FMKGSLEGKKEEQLTESEKGILEWLKTNK 524
            ++G L GKKE+ L+ESEKGIL+WLK NK
Sbjct: 107 LVEGGLRGKKEQDLSESEKGILDWLKNNK 135


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