BLASTX nr result

ID: Coptis25_contig00025554 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025554
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522485.1| pattern formation protein, putative [Ricinus...   404   e-110
emb|CBI33851.3| unnamed protein product [Vitis vinifera]              393   e-107
ref|XP_002279665.1| PREDICTED: pattern formation protein EMB30-l...   393   e-107
emb|CAN61434.1| hypothetical protein VITISV_034390 [Vitis vinifera]   392   e-107
ref|XP_002890033.1| hypothetical protein ARALYDRAFT_471559 [Arab...   379   e-103

>ref|XP_002522485.1| pattern formation protein, putative [Ricinus communis]
           gi|223538370|gb|EEF39977.1| pattern formation protein,
           putative [Ricinus communis]
          Length = 1470

 Score =  404 bits (1039), Expect = e-110
 Identities = 204/265 (76%), Positives = 232/265 (87%), Gaps = 1/265 (0%)
 Frame = -2

Query: 794 MGRLKLQSDINSIXXXXXXXEHT-SSRGALACMVNSEIGAVLAVMRRNVRWGGRYMAGDD 618
           MGRLKLQ  I SI       + + S++  LACM+N+E+GAVLAVMRRNVRWGGRYM+GDD
Sbjct: 1   MGRLKLQPGIKSIEEEPEECDSSYSNKATLACMINAEVGAVLAVMRRNVRWGGRYMSGDD 60

Query: 617 QLEHSLIQSLKTLRKQIFSWQQQWNTINPVLYLQPFLEVIRSDETGAPITGVALSSVYKI 438
           QLEHSL+QSLK+LRKQIFSWQ  W+TINP +YLQPFL+VIRSDETGAPITGVALSSVYKI
Sbjct: 61  QLEHSLVQSLKSLRKQIFSWQHPWHTINPAVYLQPFLDVIRSDETGAPITGVALSSVYKI 120

Query: 437 LSLDVIHLDTVNVENAMHLVVDAVTSCRFEVTDPASEEVVLMKILQVLLACMKSKAAIVL 258
           L+LDVI  +TVNVE+AMHLVVDAVTSCRFEVTDPASEEVVLMKILQVLL+CMKSKA++ L
Sbjct: 121 LTLDVIDQNTVNVEDAMHLVVDAVTSCRFEVTDPASEEVVLMKILQVLLSCMKSKASVTL 180

Query: 257 SNQHVCTIVNTCFRVVHQAGAKGELLQRIARHTMHELVRCIFSHLPNIDIGEDSLANGTV 78
           SNQHVCTIVNTCFR+VHQAG+KGELLQRIARHTMHELVRCIFSHLP++D  E +L NG V
Sbjct: 181 SNQHVCTIVNTCFRIVHQAGSKGELLQRIARHTMHELVRCIFSHLPDVDNTEHALVNG-V 239

Query: 77  SSGKQEFGGDHKDFNSVSKQLDNGN 3
           S+ KQE GG   D+  V+KQ +NGN
Sbjct: 240 STVKQEIGGMDNDYTFVNKQSENGN 264


>emb|CBI33851.3| unnamed protein product [Vitis vinifera]
          Length = 1264

 Score =  393 bits (1009), Expect = e-107
 Identities = 202/265 (76%), Positives = 227/265 (85%), Gaps = 1/265 (0%)
 Frame = -2

Query: 794 MGRLKLQSDINSIXXXXXXXEHTSS-RGALACMVNSEIGAVLAVMRRNVRWGGRYMAGDD 618
           MGRLKLQS I SI       E TSS + ALACM+NSE+GAVLAVMRRNVRWGGRYM+GDD
Sbjct: 1   MGRLKLQSGIKSIEEEPEDCESTSSNKAALACMINSEVGAVLAVMRRNVRWGGRYMSGDD 60

Query: 617 QLEHSLIQSLKTLRKQIFSWQQQWNTINPVLYLQPFLEVIRSDETGAPITGVALSSVYKI 438
            LEHSLIQSLK LRKQIFSWQ QW+TINP +YLQPFL+VIRSDETGAPITGVALSSVYKI
Sbjct: 61  HLEHSLIQSLKALRKQIFSWQHQWHTINPAVYLQPFLDVIRSDETGAPITGVALSSVYKI 120

Query: 437 LSLDVIHLDTVNVENAMHLVVDAVTSCRFEVTDPASEEVVLMKILQVLLACMKSKAAIVL 258
           ++LDV+ L+TVNVE+AMHLVVDAVTSCRFEVTDPASEE+VLMKILQVLLACMKSK +++L
Sbjct: 121 VTLDVLCLNTVNVEDAMHLVVDAVTSCRFEVTDPASEELVLMKILQVLLACMKSKVSVML 180

Query: 257 SNQHVCTIVNTCFRVVHQAGAKGELLQRIARHTMHELVRCIFSHLPNIDIGEDSLANGTV 78
           SNQHVCTIVNTC+R+VHQA  K ELLQRIARHTMHELVRCIFSHLP++   E +L N   
Sbjct: 181 SNQHVCTIVNTCYRIVHQAATKSELLQRIARHTMHELVRCIFSHLPDVGNTEHALVN-RG 239

Query: 77  SSGKQEFGGDHKDFNSVSKQLDNGN 3
           SS K E  G   ++N  +KQL+NGN
Sbjct: 240 SSVKLEGSGQDNEYNFGNKQLENGN 264


>ref|XP_002279665.1| PREDICTED: pattern formation protein EMB30-like [Vitis vinifera]
          Length = 1470

 Score =  393 bits (1009), Expect = e-107
 Identities = 202/265 (76%), Positives = 227/265 (85%), Gaps = 1/265 (0%)
 Frame = -2

Query: 794 MGRLKLQSDINSIXXXXXXXEHTSS-RGALACMVNSEIGAVLAVMRRNVRWGGRYMAGDD 618
           MGRLKLQS I SI       E TSS + ALACM+NSE+GAVLAVMRRNVRWGGRYM+GDD
Sbjct: 1   MGRLKLQSGIKSIEEEPEDCESTSSNKAALACMINSEVGAVLAVMRRNVRWGGRYMSGDD 60

Query: 617 QLEHSLIQSLKTLRKQIFSWQQQWNTINPVLYLQPFLEVIRSDETGAPITGVALSSVYKI 438
            LEHSLIQSLK LRKQIFSWQ QW+TINP +YLQPFL+VIRSDETGAPITGVALSSVYKI
Sbjct: 61  HLEHSLIQSLKALRKQIFSWQHQWHTINPAVYLQPFLDVIRSDETGAPITGVALSSVYKI 120

Query: 437 LSLDVIHLDTVNVENAMHLVVDAVTSCRFEVTDPASEEVVLMKILQVLLACMKSKAAIVL 258
           ++LDV+ L+TVNVE+AMHLVVDAVTSCRFEVTDPASEE+VLMKILQVLLACMKSK +++L
Sbjct: 121 VTLDVLCLNTVNVEDAMHLVVDAVTSCRFEVTDPASEELVLMKILQVLLACMKSKVSVML 180

Query: 257 SNQHVCTIVNTCFRVVHQAGAKGELLQRIARHTMHELVRCIFSHLPNIDIGEDSLANGTV 78
           SNQHVCTIVNTC+R+VHQA  K ELLQRIARHTMHELVRCIFSHLP++   E +L N   
Sbjct: 181 SNQHVCTIVNTCYRIVHQAATKSELLQRIARHTMHELVRCIFSHLPDVGNTEHALVN-RG 239

Query: 77  SSGKQEFGGDHKDFNSVSKQLDNGN 3
           SS K E  G   ++N  +KQL+NGN
Sbjct: 240 SSVKLEGSGQDNEYNFGNKQLENGN 264


>emb|CAN61434.1| hypothetical protein VITISV_034390 [Vitis vinifera]
          Length = 1433

 Score =  392 bits (1008), Expect = e-107
 Identities = 202/265 (76%), Positives = 227/265 (85%), Gaps = 1/265 (0%)
 Frame = -2

Query: 794 MGRLKLQSDINSIXXXXXXXEHTSS-RGALACMVNSEIGAVLAVMRRNVRWGGRYMAGDD 618
           MGRLKLQS I SI       E TSS + ALACM+NSE+GAVLAVMRRNVRWGGRYM+GDD
Sbjct: 1   MGRLKLQSGIKSIEEEPEDCESTSSNKAALACMINSEVGAVLAVMRRNVRWGGRYMSGDD 60

Query: 617 QLEHSLIQSLKTLRKQIFSWQQQWNTINPVLYLQPFLEVIRSDETGAPITGVALSSVYKI 438
            LEHSLIQSLK LRKQIFSWQ QW+TINP +YLQPFL+VIRSDETGAPITGVALSSVYKI
Sbjct: 61  HLEHSLIQSLKALRKQIFSWQHQWHTINPAVYLQPFLDVIRSDETGAPITGVALSSVYKI 120

Query: 437 LSLDVIHLDTVNVENAMHLVVDAVTSCRFEVTDPASEEVVLMKILQVLLACMKSKAAIVL 258
           ++LDV+ L+TVNVE+AMHLVVDAVTSCRFEVTDPASEE+VLMKILQVLLACMKSK +++L
Sbjct: 121 VTLDVLCLNTVNVEDAMHLVVDAVTSCRFEVTDPASEELVLMKILQVLLACMKSKVSVML 180

Query: 257 SNQHVCTIVNTCFRVVHQAGAKGELLQRIARHTMHELVRCIFSHLPNIDIGEDSLANGTV 78
           SNQHVCTIVNTC+R+VHQA  K ELLQRIARHTMHELVRCIFSHLP++   E +L N   
Sbjct: 181 SNQHVCTIVNTCYRIVHQAATKSELLQRIARHTMHELVRCIFSHLPDVGNTEHALVN-RG 239

Query: 77  SSGKQEFGGDHKDFNSVSKQLDNGN 3
           SS K E  G   ++N  +KQL+NGN
Sbjct: 240 SSVKLEGSGQDHEYNFGNKQLENGN 264


>ref|XP_002890033.1| hypothetical protein ARALYDRAFT_471559 [Arabidopsis lyrata subsp.
           lyrata] gi|297335875|gb|EFH66292.1| hypothetical protein
           ARALYDRAFT_471559 [Arabidopsis lyrata subsp. lyrata]
          Length = 1454

 Score =  379 bits (973), Expect = e-103
 Identities = 193/266 (72%), Positives = 223/266 (83%), Gaps = 2/266 (0%)
 Frame = -2

Query: 794 MGRLKLQSDINSIXXXXXXXEHTSSRGA--LACMVNSEIGAVLAVMRRNVRWGGRYMAGD 621
           MGRLKL S I +I       E T S     LACM+++EI AVLAVMRRNVRWGGRYM+GD
Sbjct: 1   MGRLKLHSGIKAIEEEPEDFESTDSSNTTTLACMIDTEIAAVLAVMRRNVRWGGRYMSGD 60

Query: 620 DQLEHSLIQSLKTLRKQIFSWQQQWNTINPVLYLQPFLEVIRSDETGAPITGVALSSVYK 441
           DQLEHSLIQSLK LRKQ+FSW Q W+TI+P+LYLQPFL+VIRSDETGAPIT +ALSSVYK
Sbjct: 61  DQLEHSLIQSLKALRKQVFSWNQPWHTISPMLYLQPFLDVIRSDETGAPITSIALSSVYK 120

Query: 440 ILSLDVIHLDTVNVENAMHLVVDAVTSCRFEVTDPASEEVVLMKILQVLLACMKSKAAIV 261
           IL+L+VI  +T N+E+AMHLVVD+VTSCRFEVTDPASEEVVLMKILQVLLACMK+KA+++
Sbjct: 121 ILNLNVIDQNTANIEDAMHLVVDSVTSCRFEVTDPASEEVVLMKILQVLLACMKNKASVM 180

Query: 260 LSNQHVCTIVNTCFRVVHQAGAKGELLQRIARHTMHELVRCIFSHLPNIDIGEDSLANGT 81
           LSNQHVCT+VNTCFRVVHQAG KGELLQR+ARHTMHELVRCIFSHLP++D  E +L N  
Sbjct: 181 LSNQHVCTVVNTCFRVVHQAGMKGELLQRVARHTMHELVRCIFSHLPDVDRTESTLVN-R 239

Query: 80  VSSGKQEFGGDHKDFNSVSKQLDNGN 3
             S KQE  G   D+  VSK +++GN
Sbjct: 240 AGSIKQEKAGVDSDYAIVSKPVEDGN 265


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