BLASTX nr result

ID: Coptis25_contig00025542 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025542
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539197.1| PREDICTED: uncharacterized protein LOC100809...   127   1e-27
ref|XP_002529435.1| electron transporter, putative [Ricinus comm...   127   1e-27
ref|XP_002314293.1| predicted protein [Populus trichocarpa] gi|2...   126   2e-27
ref|XP_003540762.1| PREDICTED: uncharacterized protein LOC100793...   125   5e-27
dbj|BAK02610.1| predicted protein [Hordeum vulgare subsp. vulgare]    117   1e-24

>ref|XP_003539197.1| PREDICTED: uncharacterized protein LOC100809848 [Glycine max]
          Length = 591

 Score =  127 bits (319), Expect = 1e-27
 Identities = 62/95 (65%), Positives = 79/95 (83%)
 Frame = +2

Query: 2   GTRSSPAVRIYTANGVTTELEKSKLDYLQSSIVVTNKKKLVIPELLVRNMVDFSRNLDLL 181
           GTRSSPAVRIYTA+GVT ELEKSKLDYLQ+SI+ T+ K++  PELL+RNM+DFS + D L
Sbjct: 483 GTRSSPAVRIYTADGVTAELEKSKLDYLQASILATSTKRIGFPELLLRNMLDFSVDTDSL 542

Query: 182 VEWICQQLPTSWSLKKSIVECYKGLGSGKISDIVE 286
           VEW+C QLPTS +L+KS+V+C++   + K S IVE
Sbjct: 543 VEWVCSQLPTSGTLRKSMVDCFRSHSNVKPSTIVE 577


>ref|XP_002529435.1| electron transporter, putative [Ricinus communis]
           gi|223531112|gb|EEF32961.1| electron transporter,
           putative [Ricinus communis]
          Length = 589

 Score =  127 bits (319), Expect = 1e-27
 Identities = 58/93 (62%), Positives = 78/93 (83%)
 Frame = +2

Query: 2   GTRSSPAVRIYTANGVTTELEKSKLDYLQSSIVVTNKKKLVIPELLVRNMVDFSRNLDLL 181
           GTRSSPAVR+YT +GV  ELEKSKL+YLQ+SI+VT+ K++  PELL+RNM+DF+ + + L
Sbjct: 480 GTRSSPAVRVYTGDGVIAELEKSKLEYLQASIIVTSTKRIAFPELLLRNMLDFAPDTNSL 539

Query: 182 VEWICQQLPTSWSLKKSIVECYKGLGSGKISDI 280
           VEW+C QLPTS SL+KSIV+C++   SGK++ I
Sbjct: 540 VEWVCHQLPTSGSLRKSIVDCFRSHNSGKVTSI 572


>ref|XP_002314293.1| predicted protein [Populus trichocarpa] gi|222850701|gb|EEE88248.1|
           predicted protein [Populus trichocarpa]
          Length = 588

 Score =  126 bits (317), Expect = 2e-27
 Identities = 58/90 (64%), Positives = 75/90 (83%)
 Frame = +2

Query: 2   GTRSSPAVRIYTANGVTTELEKSKLDYLQSSIVVTNKKKLVIPELLVRNMVDFSRNLDLL 181
           GTRSSPAVR+YTA GV  ELEKSKL+YLQ+S+VVT+ KK+  P+LL+RN +DF+ + D L
Sbjct: 479 GTRSSPAVRVYTAEGVIAELEKSKLEYLQASVVVTSTKKIAFPDLLLRNTLDFAMDTDTL 538

Query: 182 VEWICQQLPTSWSLKKSIVECYKGLGSGKI 271
           VEW+C  LPTS +L+KSIV+C++G  SGKI
Sbjct: 539 VEWVCHHLPTSGTLRKSIVDCFRGHNSGKI 568


>ref|XP_003540762.1| PREDICTED: uncharacterized protein LOC100793574 [Glycine max]
          Length = 631

 Score =  125 bits (313), Expect = 5e-27
 Identities = 60/95 (63%), Positives = 78/95 (82%)
 Frame = +2

Query: 2   GTRSSPAVRIYTANGVTTELEKSKLDYLQSSIVVTNKKKLVIPELLVRNMVDFSRNLDLL 181
           GTRSSPAVRIYTA+GVT ELEKSKLDYLQ+SI+ T+ K++  PEL +RNM+DF+ + D L
Sbjct: 523 GTRSSPAVRIYTADGVTAELEKSKLDYLQASILATSTKRIGFPELFLRNMLDFAVDTDSL 582

Query: 182 VEWICQQLPTSWSLKKSIVECYKGLGSGKISDIVE 286
           VEW+C QLPTS +L+KS+V+C++   + K S IVE
Sbjct: 583 VEWVCSQLPTSGTLRKSMVDCFRSHSNEKPSTIVE 617


>dbj|BAK02610.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 689

 Score =  117 bits (293), Expect = 1e-24
 Identities = 56/96 (58%), Positives = 78/96 (81%), Gaps = 1/96 (1%)
 Frame = +2

Query: 2   GTRSSPAVRIYTANGVTTELEKSKLDYLQSSIVVTNKKKLVIPELLVRNMVDFSRNLDLL 181
           GTRSSPA+RIY A+ V  +LEK+KLDYLQ+S+VVT+ ++L+IP L+  NM DFS++++ L
Sbjct: 580 GTRSSPALRIYKADRVMMDLEKAKLDYLQASLVVTSTRRLMIPGLIRSNMHDFSKDMESL 639

Query: 182 VEWICQQLPTSWSLKKSIVECYKG-LGSGKISDIVE 286
           + WIC QLPTSWSL+KS+V+C +G  G  K+ D+VE
Sbjct: 640 LRWICDQLPTSWSLRKSMVDCLRGHQGHLKVEDVVE 675


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