BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025541
         (1614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32146.3| unnamed protein product [Vitis vinifera]              483   e-165
ref|XP_003530650.1| PREDICTED: ribosomal RNA large subunit methy...   473   e-163
ref|XP_004145570.1| PREDICTED: dual-specificity RNA methyltransf...   472   e-162
ref|XP_002264209.2| PREDICTED: uncharacterized protein LOC100267...   466   e-160
ref|XP_002886632.1| radical SAM domain-containing protein [Arabi...   462   e-156

>emb|CBI32146.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score =  483 bits (1244), Expect(2) = e-165
 Identities = 231/282 (81%), Positives = 260/282 (92%)
 Frame = +2

Query: 509  QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 688
            +ILFTLDDGLVIETV+IPC +GR TVCVSSQVGCAMNCQFCYTGRMGL RHLTAAEI+EQ
Sbjct: 157  KILFTLDDGLVIETVIIPCDRGRNTVCVSSQVGCAMNCQFCYTGRMGLTRHLTAAEIVEQ 216

Query: 689  TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 868
             V+ RR+ S EVGSI+NVVFMGMGEP HNI+SVIKAA+IMV +QGL FSPRKVT+STSGL
Sbjct: 217  AVYARRLFSSEVGSITNVVFMGMGEPFHNIESVIKAADIMVHDQGLHFSPRKVTVSTSGL 276

Query: 869  VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREELSRKHNYKVLF 1048
            VPQLK FL ESNC+LAVSLNATT+EVRNW+MPINRKY L +LL TLREEL  KHNYKVLF
Sbjct: 277  VPQLKHFLRESNCALAVSLNATTDEVRNWVMPINRKYNLSLLLQTLREELRSKHNYKVLF 336

Query: 1049 EYVMLAGINDSIDDAKRLIVLVQGIPCKVNLITFNPHCGSQFKPTSDDKMIEFRNVLAEA 1228
            EYVMLAG+NDS++DA+RLI LVQGIPCKVNLI+FNPHCGSQFKPTS++K+IEFRN+LAEA
Sbjct: 337  EYVMLAGVNDSLEDARRLIDLVQGIPCKVNLISFNPHCGSQFKPTSEEKIIEFRNILAEA 396

Query: 1229 GCVVLLRPSRGDDQMAACGQLGKPGELQPPRLRVPARFQVAV 1354
            GC+V LRPSRGDDQMAACGQLGKPG++Q P LRVPA+FQ A+
Sbjct: 397  GCIVFLRPSRGDDQMAACGQLGKPGQVQAPLLRVPAKFQSAL 438



 Score =  126 bits (316), Expect(2) = e-165
 Identities = 58/83 (69%), Positives = 71/83 (85%)
 Frame = +1

Query: 259 NKVLLKGMTYTELEKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKALSD 438
           +KVLLKGM Y EL+ WVQS G+RPGQA+MLWK+LYG+ IWAH  DELEGLNKDF+  LS+
Sbjct: 77  SKVLLKGMRYFELQNWVQSHGYRPGQALMLWKRLYGNNIWAHCIDELEGLNKDFKSMLSE 136

Query: 439 LAEFKALSLKDILTAADGTRKVV 507
            AEFKAL+LKD + A+DGTRK++
Sbjct: 137 HAEFKALTLKDSIKASDGTRKIL 159


>ref|XP_003530650.1| PREDICTED: ribosomal RNA large subunit methyltransferase N-like
            [Glycine max]
          Length = 445

 Score =  473 bits (1218), Expect(2) = e-163
 Identities = 235/285 (82%), Positives = 261/285 (91%)
 Frame = +2

Query: 509  QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 688
            +ILFTL+DGLVIETVVIPC +GRTTVCVSSQVGCAMNCQFCYTGRMGL+RHLTAAEI+EQ
Sbjct: 160  KILFTLEDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLRRHLTAAEIVEQ 219

Query: 689  TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 868
             VF RR+L+ EVGSI+NVVFMGMGEPLHNID+VIKAA+IMVDEQGLQFSPRKVTISTSGL
Sbjct: 220  AVFARRLLTDEVGSITNVVFMGMGEPLHNIDNVIKAADIMVDEQGLQFSPRKVTISTSGL 279

Query: 869  VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREELSRKHNYKVLF 1048
            VPQLKRFL+ESNC+LAVSLNATT+EVRNWIMPINRKYKLE+LL TLREEL  K NYKVLF
Sbjct: 280  VPQLKRFLHESNCALAVSLNATTDEVRNWIMPINRKYKLELLLQTLREELCFKKNYKVLF 339

Query: 1049 EYVMLAGINDSIDDAKRLIVLVQGIPCKVNLITFNPHCGSQFKPTSDDKMIEFRNVLAEA 1228
            EYVML G+NDS  DA+RLI LV+GIPCK+NLI+FNPH GS FKPT D++MIEFRN LA A
Sbjct: 340  EYVMLEGVNDSDGDAERLIELVKGIPCKINLISFNPHSGSFFKPTKDERMIEFRNTLAGA 399

Query: 1229 GCVVLLRPSRGDDQMAACGQLGKPGELQPPRLRVPARFQVAV*SS 1363
            G VV+LR SRGDDQMAACGQLGKPG +Q P LRVP +FQ+A+ SS
Sbjct: 400  GLVVILRLSRGDDQMAACGQLGKPGTIQAPLLRVPEQFQMAIGSS 444



 Score =  130 bits (328), Expect(2) = e-163
 Identities = 60/82 (73%), Positives = 73/82 (89%)
 Frame = +1

Query: 262 KVLLKGMTYTELEKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKALSDL 441
           K+LLKGMTY ELEKWVQS G+RPGQAMMLWK++YG+ IWAH  DELEGLNKDF+K L++ 
Sbjct: 81  KMLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHIDELEGLNKDFKKMLNEN 140

Query: 442 AEFKALSLKDILTAADGTRKVV 507
           AEFKAL+ K+I TA+DGTRK++
Sbjct: 141 AEFKALTQKEIRTASDGTRKIL 162


>ref|XP_004145570.1| PREDICTED: dual-specificity RNA methyltransferase RlmN-like [Cucumis
            sativus]
          Length = 482

 Score =  472 bits (1215), Expect(2) = e-162
 Identities = 231/282 (81%), Positives = 255/282 (90%)
 Frame = +2

Query: 509  QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 688
            +ILF L+DGL+IETVVIPC +GRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEI+EQ
Sbjct: 197  KILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQ 256

Query: 689  TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 868
             VF RR+L+ EVG I+NVVFMGMGEPLHNID+VIKA NIMV EQGL FSPRKVT+STSGL
Sbjct: 257  AVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVTVSTSGL 316

Query: 869  VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREELSRKHNYKVLF 1048
            VPQLKRFLNE NC+LAVSLNATT+EVRNWIMPINRKYKL +LL TLREEL  KH YKVLF
Sbjct: 317  VPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKHKYKVLF 376

Query: 1049 EYVMLAGINDSIDDAKRLIVLVQGIPCKVNLITFNPHCGSQFKPTSDDKMIEFRNVLAEA 1228
            EYVMLAG+NDSI+DAKR++ LVQGIPCK+NLI+FNPHCGSQF+PT  +KMI FRNVLAEA
Sbjct: 377  EYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFRNVLAEA 436

Query: 1229 GCVVLLRPSRGDDQMAACGQLGKPGELQPPRLRVPARFQVAV 1354
            G  V LR SRGDDQMAACGQLGKPG +Q P LRVP RFQ+A+
Sbjct: 437  GLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM 478



 Score =  128 bits (322), Expect(2) = e-162
 Identities = 57/83 (68%), Positives = 74/83 (89%)
 Frame = +1

Query: 259 NKVLLKGMTYTELEKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKALSD 438
           +K+LLKG++YTELEKWVQ+ G+RPGQA+MLWK+LYG  IWAH+ DELEGLNKDF+K L +
Sbjct: 117 SKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIE 176

Query: 439 LAEFKALSLKDILTAADGTRKVV 507
            AEF+ALSL++IL + DGTRK++
Sbjct: 177 NAEFRALSLREILPSCDGTRKIL 199


>ref|XP_002264209.2| PREDICTED: uncharacterized protein LOC100267261 [Vitis vinifera]
          Length = 907

 Score =  466 bits (1200), Expect(2) = e-160
 Identities = 222/268 (82%), Positives = 249/268 (92%)
 Frame = +2

Query: 509  QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 688
            +ILFTLDDGLVIETV+IPC +GR TVCVSSQVGCAMNCQFCYTGRMGL RHLTAAEI+EQ
Sbjct: 157  KILFTLDDGLVIETVIIPCDRGRNTVCVSSQVGCAMNCQFCYTGRMGLTRHLTAAEIVEQ 216

Query: 689  TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 868
             V+ RR+ S EVGSI+NVVFMGMGEP HNI+SVIKAA+IMV +QGL FSPRKVT+STSGL
Sbjct: 217  AVYARRLFSSEVGSITNVVFMGMGEPFHNIESVIKAADIMVHDQGLHFSPRKVTVSTSGL 276

Query: 869  VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREELSRKHNYKVLF 1048
            VPQLK FL ESNC+LAVSLNATT+EVRNW+MPINRKY L +LL TLREEL  KHNYKVLF
Sbjct: 277  VPQLKHFLRESNCALAVSLNATTDEVRNWVMPINRKYNLSLLLQTLREELRSKHNYKVLF 336

Query: 1049 EYVMLAGINDSIDDAKRLIVLVQGIPCKVNLITFNPHCGSQFKPTSDDKMIEFRNVLAEA 1228
            EYVMLAG+NDS++DA+RLI LVQGIPCKVNLI+FNPHCGSQFKPTS++K+IEFRN+LAEA
Sbjct: 337  EYVMLAGVNDSLEDARRLIDLVQGIPCKVNLISFNPHCGSQFKPTSEEKIIEFRNILAEA 396

Query: 1229 GCVVLLRPSRGDDQMAACGQLGKPGELQ 1312
            GC+V LRPSRGDDQMAACGQLGKPG++Q
Sbjct: 397  GCIVFLRPSRGDDQMAACGQLGKPGQVQ 424



 Score =  126 bits (316), Expect(2) = e-160
 Identities = 58/83 (69%), Positives = 71/83 (85%)
 Frame = +1

Query: 259 NKVLLKGMTYTELEKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKALSD 438
           +KVLLKGM Y EL+ WVQS G+RPGQA+MLWK+LYG+ IWAH  DELEGLNKDF+  LS+
Sbjct: 77  SKVLLKGMRYFELQNWVQSHGYRPGQALMLWKRLYGNNIWAHCIDELEGLNKDFKSMLSE 136

Query: 439 LAEFKALSLKDILTAADGTRKVV 507
            AEFKAL+LKD + A+DGTRK++
Sbjct: 137 HAEFKALTLKDSIKASDGTRKIL 159


>ref|XP_002886632.1| radical SAM domain-containing protein [Arabidopsis lyrata subsp.
            lyrata] gi|297332473|gb|EFH62891.1| radical SAM
            domain-containing protein [Arabidopsis lyrata subsp.
            lyrata]
          Length = 458

 Score =  462 bits (1190), Expect(2) = e-156
 Identities = 228/286 (79%), Positives = 255/286 (89%)
 Frame = +2

Query: 509  QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 688
            +ILFTLDDGLVIETVVIPC +GRTTVCVSSQVGCAMNCQFCYTGRMGLKR+LT AEI+EQ
Sbjct: 173  KILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAEIVEQ 232

Query: 689  TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 868
             V+ RR+LS EVGSI+NVVFMGMGEP HNID+VIKAANIMVDE GL FSPRKVT+STSGL
Sbjct: 233  AVYARRLLSHEVGSITNVVFMGMGEPFHNIDNVIKAANIMVDENGLHFSPRKVTVSTSGL 292

Query: 869  VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREELSRKHNYKVLF 1048
            VPQLKRFL ESNC+LAVSLNATT+EVRNWIMPINRKYKL +LL TLRE LS KH YKVLF
Sbjct: 293  VPQLKRFLRESNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREGLSSKHKYKVLF 352

Query: 1049 EYVMLAGINDSIDDAKRLIVLVQGIPCKVNLITFNPHCGSQFKPTSDDKMIEFRNVLAEA 1228
            EYVMLAG+NDS+DDA+RL+ LVQGIPCK+NLI FNPH GSQF  T +DKMI+FRNVLAE 
Sbjct: 353  EYVMLAGVNDSMDDARRLVELVQGIPCKINLIQFNPHSGSQFIQTEEDKMIKFRNVLAEG 412

Query: 1229 GCVVLLRPSRGDDQMAACGQLGKPGELQPPRLRVPARFQVAV*SSV 1366
            GC VL+R SRG+DQMAACGQLG  G +Q P +RVP +F+ A+ +SV
Sbjct: 413  GCTVLMRFSRGNDQMAACGQLGMIGAVQAPVMRVPEQFRAALKASV 458



 Score =  118 bits (295), Expect(2) = e-156
 Identities = 54/85 (63%), Positives = 70/85 (82%)
 Frame = +1

Query: 253 NKNKVLLKGMTYTELEKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKAL 432
           +  KV+LKGMTY  L++WVQS GFRPGQA+MLWK+LY   IWA++ DELEGLNKD ++ +
Sbjct: 91  DNQKVILKGMTYAALQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMI 150

Query: 433 SDLAEFKALSLKDILTAADGTRKVV 507
           S+ AEF ALS KDI +A+DGTRK++
Sbjct: 151 SEHAEFGALSFKDIRSASDGTRKIL 175