BLASTX nr result
ID: Coptis25_contig00025541
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025541 (1614 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI32146.3| unnamed protein product [Vitis vinifera] 483 e-165 ref|XP_003530650.1| PREDICTED: ribosomal RNA large subunit methy... 473 e-163 ref|XP_004145570.1| PREDICTED: dual-specificity RNA methyltransf... 472 e-162 ref|XP_002264209.2| PREDICTED: uncharacterized protein LOC100267... 466 e-160 ref|XP_002886632.1| radical SAM domain-containing protein [Arabi... 462 e-156 >emb|CBI32146.3| unnamed protein product [Vitis vinifera] Length = 439 Score = 483 bits (1244), Expect(2) = e-165 Identities = 231/282 (81%), Positives = 260/282 (92%) Frame = +2 Query: 509 QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 688 +ILFTLDDGLVIETV+IPC +GR TVCVSSQVGCAMNCQFCYTGRMGL RHLTAAEI+EQ Sbjct: 157 KILFTLDDGLVIETVIIPCDRGRNTVCVSSQVGCAMNCQFCYTGRMGLTRHLTAAEIVEQ 216 Query: 689 TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 868 V+ RR+ S EVGSI+NVVFMGMGEP HNI+SVIKAA+IMV +QGL FSPRKVT+STSGL Sbjct: 217 AVYARRLFSSEVGSITNVVFMGMGEPFHNIESVIKAADIMVHDQGLHFSPRKVTVSTSGL 276 Query: 869 VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREELSRKHNYKVLF 1048 VPQLK FL ESNC+LAVSLNATT+EVRNW+MPINRKY L +LL TLREEL KHNYKVLF Sbjct: 277 VPQLKHFLRESNCALAVSLNATTDEVRNWVMPINRKYNLSLLLQTLREELRSKHNYKVLF 336 Query: 1049 EYVMLAGINDSIDDAKRLIVLVQGIPCKVNLITFNPHCGSQFKPTSDDKMIEFRNVLAEA 1228 EYVMLAG+NDS++DA+RLI LVQGIPCKVNLI+FNPHCGSQFKPTS++K+IEFRN+LAEA Sbjct: 337 EYVMLAGVNDSLEDARRLIDLVQGIPCKVNLISFNPHCGSQFKPTSEEKIIEFRNILAEA 396 Query: 1229 GCVVLLRPSRGDDQMAACGQLGKPGELQPPRLRVPARFQVAV 1354 GC+V LRPSRGDDQMAACGQLGKPG++Q P LRVPA+FQ A+ Sbjct: 397 GCIVFLRPSRGDDQMAACGQLGKPGQVQAPLLRVPAKFQSAL 438 Score = 126 bits (316), Expect(2) = e-165 Identities = 58/83 (69%), Positives = 71/83 (85%) Frame = +1 Query: 259 NKVLLKGMTYTELEKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKALSD 438 +KVLLKGM Y EL+ WVQS G+RPGQA+MLWK+LYG+ IWAH DELEGLNKDF+ LS+ Sbjct: 77 SKVLLKGMRYFELQNWVQSHGYRPGQALMLWKRLYGNNIWAHCIDELEGLNKDFKSMLSE 136 Query: 439 LAEFKALSLKDILTAADGTRKVV 507 AEFKAL+LKD + A+DGTRK++ Sbjct: 137 HAEFKALTLKDSIKASDGTRKIL 159 >ref|XP_003530650.1| PREDICTED: ribosomal RNA large subunit methyltransferase N-like [Glycine max] Length = 445 Score = 473 bits (1218), Expect(2) = e-163 Identities = 235/285 (82%), Positives = 261/285 (91%) Frame = +2 Query: 509 QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 688 +ILFTL+DGLVIETVVIPC +GRTTVCVSSQVGCAMNCQFCYTGRMGL+RHLTAAEI+EQ Sbjct: 160 KILFTLEDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLRRHLTAAEIVEQ 219 Query: 689 TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 868 VF RR+L+ EVGSI+NVVFMGMGEPLHNID+VIKAA+IMVDEQGLQFSPRKVTISTSGL Sbjct: 220 AVFARRLLTDEVGSITNVVFMGMGEPLHNIDNVIKAADIMVDEQGLQFSPRKVTISTSGL 279 Query: 869 VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREELSRKHNYKVLF 1048 VPQLKRFL+ESNC+LAVSLNATT+EVRNWIMPINRKYKLE+LL TLREEL K NYKVLF Sbjct: 280 VPQLKRFLHESNCALAVSLNATTDEVRNWIMPINRKYKLELLLQTLREELCFKKNYKVLF 339 Query: 1049 EYVMLAGINDSIDDAKRLIVLVQGIPCKVNLITFNPHCGSQFKPTSDDKMIEFRNVLAEA 1228 EYVML G+NDS DA+RLI LV+GIPCK+NLI+FNPH GS FKPT D++MIEFRN LA A Sbjct: 340 EYVMLEGVNDSDGDAERLIELVKGIPCKINLISFNPHSGSFFKPTKDERMIEFRNTLAGA 399 Query: 1229 GCVVLLRPSRGDDQMAACGQLGKPGELQPPRLRVPARFQVAV*SS 1363 G VV+LR SRGDDQMAACGQLGKPG +Q P LRVP +FQ+A+ SS Sbjct: 400 GLVVILRLSRGDDQMAACGQLGKPGTIQAPLLRVPEQFQMAIGSS 444 Score = 130 bits (328), Expect(2) = e-163 Identities = 60/82 (73%), Positives = 73/82 (89%) Frame = +1 Query: 262 KVLLKGMTYTELEKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKALSDL 441 K+LLKGMTY ELEKWVQS G+RPGQAMMLWK++YG+ IWAH DELEGLNKDF+K L++ Sbjct: 81 KMLLKGMTYPELEKWVQSHGYRPGQAMMLWKRMYGNNIWAHHIDELEGLNKDFKKMLNEN 140 Query: 442 AEFKALSLKDILTAADGTRKVV 507 AEFKAL+ K+I TA+DGTRK++ Sbjct: 141 AEFKALTQKEIRTASDGTRKIL 162 >ref|XP_004145570.1| PREDICTED: dual-specificity RNA methyltransferase RlmN-like [Cucumis sativus] Length = 482 Score = 472 bits (1215), Expect(2) = e-162 Identities = 231/282 (81%), Positives = 255/282 (90%) Frame = +2 Query: 509 QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 688 +ILF L+DGL+IETVVIPC +GRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEI+EQ Sbjct: 197 KILFNLEDGLIIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIVEQ 256 Query: 689 TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 868 VF RR+L+ EVG I+NVVFMGMGEPLHNID+VIKA NIMV EQGL FSPRKVT+STSGL Sbjct: 257 AVFARRLLTSEVGLITNVVFMGMGEPLHNIDNVIKAVNIMVHEQGLHFSPRKVTVSTSGL 316 Query: 869 VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREELSRKHNYKVLF 1048 VPQLKRFLNE NC+LAVSLNATT+EVRNWIMPINRKYKL +LL TLREEL KH YKVLF Sbjct: 317 VPQLKRFLNECNCALAVSLNATTDEVRNWIMPINRKYKLGLLLQTLREELRCKHKYKVLF 376 Query: 1049 EYVMLAGINDSIDDAKRLIVLVQGIPCKVNLITFNPHCGSQFKPTSDDKMIEFRNVLAEA 1228 EYVMLAG+NDSI+DAKR++ LVQGIPCK+NLI+FNPHCGSQF+PT +KMI FRNVLAEA Sbjct: 377 EYVMLAGVNDSIEDAKRIVDLVQGIPCKINLISFNPHCGSQFRPTCKEKMIGFRNVLAEA 436 Query: 1229 GCVVLLRPSRGDDQMAACGQLGKPGELQPPRLRVPARFQVAV 1354 G V LR SRGDDQMAACGQLGKPG +Q P LRVP RFQ+A+ Sbjct: 437 GLTVFLRLSRGDDQMAACGQLGKPGIVQAPLLRVPDRFQMAM 478 Score = 128 bits (322), Expect(2) = e-162 Identities = 57/83 (68%), Positives = 74/83 (89%) Frame = +1 Query: 259 NKVLLKGMTYTELEKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKALSD 438 +K+LLKG++YTELEKWVQ+ G+RPGQA+MLWK+LYG IWAH+ DELEGLNKDF+K L + Sbjct: 117 SKMLLKGLSYTELEKWVQAQGYRPGQALMLWKRLYGDNIWAHTGDELEGLNKDFKKMLIE 176 Query: 439 LAEFKALSLKDILTAADGTRKVV 507 AEF+ALSL++IL + DGTRK++ Sbjct: 177 NAEFRALSLREILPSCDGTRKIL 199 >ref|XP_002264209.2| PREDICTED: uncharacterized protein LOC100267261 [Vitis vinifera] Length = 907 Score = 466 bits (1200), Expect(2) = e-160 Identities = 222/268 (82%), Positives = 249/268 (92%) Frame = +2 Query: 509 QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 688 +ILFTLDDGLVIETV+IPC +GR TVCVSSQVGCAMNCQFCYTGRMGL RHLTAAEI+EQ Sbjct: 157 KILFTLDDGLVIETVIIPCDRGRNTVCVSSQVGCAMNCQFCYTGRMGLTRHLTAAEIVEQ 216 Query: 689 TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 868 V+ RR+ S EVGSI+NVVFMGMGEP HNI+SVIKAA+IMV +QGL FSPRKVT+STSGL Sbjct: 217 AVYARRLFSSEVGSITNVVFMGMGEPFHNIESVIKAADIMVHDQGLHFSPRKVTVSTSGL 276 Query: 869 VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREELSRKHNYKVLF 1048 VPQLK FL ESNC+LAVSLNATT+EVRNW+MPINRKY L +LL TLREEL KHNYKVLF Sbjct: 277 VPQLKHFLRESNCALAVSLNATTDEVRNWVMPINRKYNLSLLLQTLREELRSKHNYKVLF 336 Query: 1049 EYVMLAGINDSIDDAKRLIVLVQGIPCKVNLITFNPHCGSQFKPTSDDKMIEFRNVLAEA 1228 EYVMLAG+NDS++DA+RLI LVQGIPCKVNLI+FNPHCGSQFKPTS++K+IEFRN+LAEA Sbjct: 337 EYVMLAGVNDSLEDARRLIDLVQGIPCKVNLISFNPHCGSQFKPTSEEKIIEFRNILAEA 396 Query: 1229 GCVVLLRPSRGDDQMAACGQLGKPGELQ 1312 GC+V LRPSRGDDQMAACGQLGKPG++Q Sbjct: 397 GCIVFLRPSRGDDQMAACGQLGKPGQVQ 424 Score = 126 bits (316), Expect(2) = e-160 Identities = 58/83 (69%), Positives = 71/83 (85%) Frame = +1 Query: 259 NKVLLKGMTYTELEKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKALSD 438 +KVLLKGM Y EL+ WVQS G+RPGQA+MLWK+LYG+ IWAH DELEGLNKDF+ LS+ Sbjct: 77 SKVLLKGMRYFELQNWVQSHGYRPGQALMLWKRLYGNNIWAHCIDELEGLNKDFKSMLSE 136 Query: 439 LAEFKALSLKDILTAADGTRKVV 507 AEFKAL+LKD + A+DGTRK++ Sbjct: 137 HAEFKALTLKDSIKASDGTRKIL 159 >ref|XP_002886632.1| radical SAM domain-containing protein [Arabidopsis lyrata subsp. lyrata] gi|297332473|gb|EFH62891.1| radical SAM domain-containing protein [Arabidopsis lyrata subsp. lyrata] Length = 458 Score = 462 bits (1190), Expect(2) = e-156 Identities = 228/286 (79%), Positives = 255/286 (89%) Frame = +2 Query: 509 QILFTLDDGLVIETVVIPCKKGRTTVCVSSQVGCAMNCQFCYTGRMGLKRHLTAAEIIEQ 688 +ILFTLDDGLVIETVVIPC +GRTTVCVSSQVGCAMNCQFCYTGRMGLKR+LT AEI+EQ Sbjct: 173 KILFTLDDGLVIETVVIPCDRGRTTVCVSSQVGCAMNCQFCYTGRMGLKRNLTTAEIVEQ 232 Query: 689 TVFVRRVLSGEVGSISNVVFMGMGEPLHNIDSVIKAANIMVDEQGLQFSPRKVTISTSGL 868 V+ RR+LS EVGSI+NVVFMGMGEP HNID+VIKAANIMVDE GL FSPRKVT+STSGL Sbjct: 233 AVYARRLLSHEVGSITNVVFMGMGEPFHNIDNVIKAANIMVDENGLHFSPRKVTVSTSGL 292 Query: 869 VPQLKRFLNESNCSLAVSLNATTNEVRNWIMPINRKYKLEMLLGTLREELSRKHNYKVLF 1048 VPQLKRFL ESNC+LAVSLNATT+EVRNWIMPINRKYKL +LL TLRE LS KH YKVLF Sbjct: 293 VPQLKRFLRESNCALAVSLNATTDEVRNWIMPINRKYKLSLLLETLREGLSSKHKYKVLF 352 Query: 1049 EYVMLAGINDSIDDAKRLIVLVQGIPCKVNLITFNPHCGSQFKPTSDDKMIEFRNVLAEA 1228 EYVMLAG+NDS+DDA+RL+ LVQGIPCK+NLI FNPH GSQF T +DKMI+FRNVLAE Sbjct: 353 EYVMLAGVNDSMDDARRLVELVQGIPCKINLIQFNPHSGSQFIQTEEDKMIKFRNVLAEG 412 Query: 1229 GCVVLLRPSRGDDQMAACGQLGKPGELQPPRLRVPARFQVAV*SSV 1366 GC VL+R SRG+DQMAACGQLG G +Q P +RVP +F+ A+ +SV Sbjct: 413 GCTVLMRFSRGNDQMAACGQLGMIGAVQAPVMRVPEQFRAALKASV 458 Score = 118 bits (295), Expect(2) = e-156 Identities = 54/85 (63%), Positives = 70/85 (82%) Frame = +1 Query: 253 NKNKVLLKGMTYTELEKWVQSIGFRPGQAMMLWKQLYGHGIWAHSSDELEGLNKDFRKAL 432 + KV+LKGMTY L++WVQS GFRPGQA+MLWK+LY IWA++ DELEGLNKD ++ + Sbjct: 91 DNQKVILKGMTYAALQEWVQSHGFRPGQALMLWKRLYKDNIWANNVDELEGLNKDLKRMI 150 Query: 433 SDLAEFKALSLKDILTAADGTRKVV 507 S+ AEF ALS KDI +A+DGTRK++ Sbjct: 151 SEHAEFGALSFKDIRSASDGTRKIL 175