BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025535
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003594391.1| F-box protein [Medicago truncatula] gi|35548...    60   1e-07
ref|XP_003594235.1| F-box protein [Medicago truncatula] gi|35548...    60   2e-07
ref|XP_003594393.1| F-box protein [Medicago truncatula] gi|35548...    60   2e-07
ref|XP_003637499.1| F-box protein [Medicago truncatula] gi|35550...    59   4e-07
ref|XP_003594188.1| F-box protein [Medicago truncatula] gi|87162...    58   7e-07

>ref|XP_003594391.1| F-box protein [Medicago truncatula] gi|355483439|gb|AES64642.1|
           F-box protein [Medicago truncatula]
          Length = 388

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
 Frame = -2

Query: 356 ATLDGNLCV-VSYDEASFELWVMKEYGARDSWTKQFIIGRHAHELEVHISCFLAPLCFID 180
           A L G LC+ V+Y     ++WVMKEYG RDSW K F + +   +       FL PL +  
Sbjct: 260 AVLGGCLCLPVNYQTTKIDVWVMKEYGCRDSWCKHFTLVKSCLD-------FLRPLGYCS 312

Query: 179 DGETLVLDNGCNLLF-FELKSQTL 111
           DG  ++L+  C  LF ++LKS+ +
Sbjct: 313 DGSKVLLEIDCKKLFWYDLKSEQI 336


>ref|XP_003594235.1| F-box protein [Medicago truncatula] gi|355483283|gb|AES64486.1|
           F-box protein [Medicago truncatula]
          Length = 325

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 9/87 (10%)
 Frame = -2

Query: 350 LDGNLCV-VSYDEASFELWVMKEYGARDSWTKQFIIGRHAHELEVHISCFLAPLCFIDDG 174
           L+G LC+ ++Y    FE+WVMKEYG+ DSW K F +      +++ I     PLC+  DG
Sbjct: 180 LEGCLCMTLNYRNTEFEVWVMKEYGSTDSWCKLFTLMEPCFLVDLEI---FRPLCYSSDG 236

Query: 173 ETLVLD--------NGCNLLFFELKSQ 117
             ++L+        N  NL++++LKS+
Sbjct: 237 SKVLLEGIHVSTEGNNRNLIWYDLKSE 263


>ref|XP_003594393.1| F-box protein [Medicago truncatula] gi|355483441|gb|AES64644.1|
           F-box protein [Medicago truncatula]
          Length = 704

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 9/91 (9%)
 Frame = -2

Query: 356 ATLDGNLCV-VSYDEASFELWVMKEYGARDSWTKQFIIGRHAHELEVHISCFLAPLCFID 180
           A L G LC+ V Y +   ++WVMKEYG RDSW K F +     +L + +   L P+C+  
Sbjct: 278 AVLGGCLCITVDYKDTKIDVWVMKEYGCRDSWCKLFTMAESCFDLPLKL---LRPICYSS 334

Query: 179 DGETLVLDNGCNLL--------FFELKSQTL 111
           DG  ++L+    LL        +++LKS+ +
Sbjct: 335 DGSKVLLERAHVLLEVQHRKLFWYDLKSEQI 365


>ref|XP_003637499.1| F-box protein [Medicago truncatula] gi|355503434|gb|AES84637.1|
           F-box protein [Medicago truncatula]
          Length = 380

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
 Frame = -2

Query: 356 ATLDGNLC-VVSYDEASFELWVMKEYGARDSWTKQFIIGRHAHELEVHISCFLAPLCFID 180
           A L+G LC +V+Y     ++WVMKEYG RDSW + F +      L +     L PL +  
Sbjct: 253 AVLEGCLCMIVNYQTVKIDVWVMKEYGCRDSWCELFTLAESCFILPLKT---LWPLAYSS 309

Query: 179 DGETLVLDNGCNLLF-FELKSQ 117
           DG  ++L+  C  LF ++LKS+
Sbjct: 310 DGSMVLLEVDCEKLFWYDLKSE 331


>ref|XP_003594188.1| F-box protein [Medicago truncatula] gi|87162697|gb|ABD28492.1|
           Cyclin-like F-box; F-box protein interaction domain;
           Galactose oxidase, central [Medicago truncatula]
           gi|355483236|gb|AES64439.1| F-box protein [Medicago
           truncatula]
          Length = 424

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
 Frame = -2

Query: 356 ATLDGNLCV-VSYDEASFELWVMKEYGARDSWTKQFIIGRHAHELEVHISCFLAPLCFID 180
           A L G LC+ V+Y+    ++WVMK+YG+RDSW K F + +      +    FL PLC+  
Sbjct: 285 AVLGGCLCMSVNYEATKIDVWVMKDYGSRDSWCKLFTLVKSCFNSPLD---FLRPLCYSS 341

Query: 179 DGETLVLDNGCN-------LLFFELKSQ 117
           DG  ++L+   N       L +++LKS+
Sbjct: 342 DGGKVLLEANPNLDKTLRKLFWYDLKSE 369