BLASTX nr result

ID: Coptis25_contig00025532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025532
         (573 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633983.1| PREDICTED: uncharacterized protein LOC100255...   214   6e-54
emb|CBI40499.3| unnamed protein product [Vitis vinifera]              214   6e-54
emb|CAN82499.1| hypothetical protein VITISV_004913 [Vitis vinifera]   208   4e-52
ref|XP_003612481.1| Chitinase domain-containing protein [Medicag...   203   1e-50
ref|XP_002320856.1| predicted protein [Populus trichocarpa] gi|2...   196   2e-48

>ref|XP_003633983.1| PREDICTED: uncharacterized protein LOC100255153 [Vitis vinifera]
          Length = 892

 Score =  214 bits (546), Expect = 6e-54
 Identities = 99/135 (73%), Positives = 116/135 (85%)
 Frame = +1

Query: 19  GPHNPGPNAPLKWITATVRILLGATSSSELNLARKIFIGMNFYGNDFLLSKGVGGGAITG 198
           GPHNPGPNAPLKWI +T+++LLG+   S+ +LARKI +G+NFYGNDF LSKG GGGAITG
Sbjct: 301 GPHNPGPNAPLKWIHSTLQLLLGSVGKSDQSLARKILLGINFYGNDFALSKGGGGGAITG 360

Query: 199 SDYLTLLEKHRPVLQWDEESEEHFFVYSDNNQIKHAVFYPSLMSISMRLEEARVLGAGIS 378
            DYL+LL+KH+PVLQW++ S EH F YSD++  KHAVFYPSLMSI +RLEEAR  G GIS
Sbjct: 361 RDYLSLLDKHKPVLQWEKNSGEHLFFYSDDHHAKHAVFYPSLMSIFLRLEEARSWGVGIS 420

Query: 379 IWEIGQGLDYFFDLL 423
           IWEIGQGLDYFFDLL
Sbjct: 421 IWEIGQGLDYFFDLL 435


>emb|CBI40499.3| unnamed protein product [Vitis vinifera]
          Length = 435

 Score =  214 bits (546), Expect = 6e-54
 Identities = 99/135 (73%), Positives = 116/135 (85%)
 Frame = +1

Query: 19  GPHNPGPNAPLKWITATVRILLGATSSSELNLARKIFIGMNFYGNDFLLSKGVGGGAITG 198
           GPHNPGPNAPLKWI +T+++LLG+   S+ +LARKI +G+NFYGNDF LSKG GGGAITG
Sbjct: 301 GPHNPGPNAPLKWIHSTLQLLLGSVGKSDQSLARKILLGINFYGNDFALSKGGGGGAITG 360

Query: 199 SDYLTLLEKHRPVLQWDEESEEHFFVYSDNNQIKHAVFYPSLMSISMRLEEARVLGAGIS 378
            DYL+LL+KH+PVLQW++ S EH F YSD++  KHAVFYPSLMSI +RLEEAR  G GIS
Sbjct: 361 RDYLSLLDKHKPVLQWEKNSGEHLFFYSDDHHAKHAVFYPSLMSIFLRLEEARSWGVGIS 420

Query: 379 IWEIGQGLDYFFDLL 423
           IWEIGQGLDYFFDLL
Sbjct: 421 IWEIGQGLDYFFDLL 435


>emb|CAN82499.1| hypothetical protein VITISV_004913 [Vitis vinifera]
          Length = 516

 Score =  208 bits (530), Expect = 4e-52
 Identities = 98/138 (71%), Positives = 115/138 (83%), Gaps = 3/138 (2%)
 Frame = +1

Query: 19  GPHNPGPNAPLKWITATVRILLGATSSSELNLARKIFIGMNFYGNDFLLSKGV---GGGA 189
           GPHNPGPNAPLKWI +T+++LLG+   S+ +LARKI +G+NFYGNDF L KG    GGGA
Sbjct: 379 GPHNPGPNAPLKWIHSTLQLLLGSVGKSDQSLARKILLGINFYGNDFALXKGTAGGGGGA 438

Query: 190 ITGSDYLTLLEKHRPVLQWDEESEEHFFVYSDNNQIKHAVFYPSLMSISMRLEEARVLGA 369
           ITG DYL+LL+KH+PVLQW++ S EH F YSD++  KHAVFYPSLMSI +RLEEAR  G 
Sbjct: 439 ITGRDYLSLLDKHKPVLQWEKNSGEHLFFYSDDHHAKHAVFYPSLMSIFLRLEEARSWGV 498

Query: 370 GISIWEIGQGLDYFFDLL 423
           GISIWEIGQGLDYFFDLL
Sbjct: 499 GISIWEIGQGLDYFFDLL 516


>ref|XP_003612481.1| Chitinase domain-containing protein [Medicago truncatula]
           gi|355513816|gb|AES95439.1| Chitinase domain-containing
           protein [Medicago truncatula]
          Length = 442

 Score =  203 bits (517), Expect = 1e-50
 Identities = 99/135 (73%), Positives = 111/135 (82%), Gaps = 1/135 (0%)
 Frame = +1

Query: 22  PHNPGPNAPLKWITATVRILLG-ATSSSELNLARKIFIGMNFYGNDFLLSKGVGGGAITG 198
           PHNPGPNAPLKWI   ++ILLG A+++S  N+A KIF+G+NFYGNDF LSK  GGGAI G
Sbjct: 308 PHNPGPNAPLKWIQIILQILLGGASANSAQNIAPKIFLGINFYGNDFSLSKDSGGGAIIG 367

Query: 199 SDYLTLLEKHRPVLQWDEESEEHFFVYSDNNQIKHAVFYPSLMSISMRLEEARVLGAGIS 378
            DYL LLEKHRPVLQWD+ S EH F Y+D+  IKHAVFYPSL SIS+RLEEAR  G GIS
Sbjct: 368 RDYLALLEKHRPVLQWDKNSGEHVFFYTDDKNIKHAVFYPSLKSISLRLEEARTWGCGIS 427

Query: 379 IWEIGQGLDYFFDLL 423
           IWEIGQGLDYFF LL
Sbjct: 428 IWEIGQGLDYFFYLL 442


>ref|XP_002320856.1| predicted protein [Populus trichocarpa] gi|222861629|gb|EEE99171.1|
           predicted protein [Populus trichocarpa]
          Length = 399

 Score =  196 bits (499), Expect = 2e-48
 Identities = 94/135 (69%), Positives = 114/135 (84%), Gaps = 1/135 (0%)
 Frame = +1

Query: 22  PHNPGPNAPLKWITATVRILLGATSSSELNLARKIFIGMNFYGNDFLLSKGV-GGGAITG 198
           PHNPGPNAPLKWI  T++ILLG  +S    LA KIF+G+NF+GNDF++S+G  GGGAITG
Sbjct: 267 PHNPGPNAPLKWIRFTLQILLG--NSGARALANKIFLGINFFGNDFVISEGSEGGGAITG 324

Query: 199 SDYLTLLEKHRPVLQWDEESEEHFFVYSDNNQIKHAVFYPSLMSISMRLEEARVLGAGIS 378
            +YL+LLEKH+P LQW++ S EHFF+Y D+  I HAVFYPSLMS+S+RLEEAR+ G GIS
Sbjct: 325 REYLSLLEKHKPELQWEKNSGEHFFLYVDDEHINHAVFYPSLMSVSIRLEEARLQGVGIS 384

Query: 379 IWEIGQGLDYFFDLL 423
           IWEIGQGLDYFF+LL
Sbjct: 385 IWEIGQGLDYFFNLL 399


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