BLASTX nr result

ID: Coptis25_contig00025529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025529
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531948.1| PREDICTED: ubiquitin-conjugating enzyme E2-1...    58   3e-09
ref|XP_003531947.1| PREDICTED: ubiquitin-conjugating enzyme E2-1...    58   3e-09
gb|AAS20974.1| ubiquitin-conjugating enzyme 9 [Hyacinthus orient...    55   3e-08
gb|ACU23521.1| unknown [Glycine max]                                   54   5e-08
gb|EAZ32338.1| hypothetical protein OsJ_16548 [Oryza sativa Japo...    54   6e-08

>ref|XP_003531948.1| PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like isoform 2
           [Glycine max]
          Length = 160

 Score = 58.2 bits (139), Expect(2) = 3e-09
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +1

Query: 199 HPFKPPKVTFCTNIFHPNINSDGSICLGI 285
           +PFKPPKV+FCT +FHPNINS+GSICL I
Sbjct: 72  YPFKPPKVSFCTKVFHPNINSNGSICLDI 100



 Score = 28.1 bits (61), Expect(2) = 3e-09
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +2

Query: 293 KEQWIPKVTISKVLL 337
           KEQW P +TISKVLL
Sbjct: 102 KEQWSPALTISKVLL 116


>ref|XP_003531947.1| PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like isoform 1
           [Glycine max]
          Length = 148

 Score = 58.2 bits (139), Expect(2) = 3e-09
 Identities = 23/29 (79%), Positives = 27/29 (93%)
 Frame = +1

Query: 199 HPFKPPKVTFCTNIFHPNINSDGSICLGI 285
           +PFKPPKV+FCT +FHPNINS+GSICL I
Sbjct: 60  YPFKPPKVSFCTKVFHPNINSNGSICLDI 88



 Score = 28.1 bits (61), Expect(2) = 3e-09
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +2

Query: 293 KEQWIPKVTISKVLL 337
           KEQW P +TISKVLL
Sbjct: 90  KEQWSPALTISKVLL 104


>gb|AAS20974.1| ubiquitin-conjugating enzyme 9 [Hyacinthus orientalis]
          Length = 140

 Score = 54.7 bits (130), Expect(2) = 3e-08
 Identities = 23/31 (74%), Positives = 26/31 (83%)
 Frame = +1

Query: 193 RTHPFKPPKVTFCTNIFHPNINSDGSICLGI 285
           R +PFKPPKV F T +FHPNINS+GSICL I
Sbjct: 50  RDYPFKPPKVAFRTKVFHPNINSNGSICLDI 80



 Score = 28.1 bits (61), Expect(2) = 3e-08
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +2

Query: 293 KEQWIPKVTISKVLL 337
           KEQW P +TISKVLL
Sbjct: 82  KEQWSPALTISKVLL 96


>gb|ACU23521.1| unknown [Glycine max]
          Length = 148

 Score = 53.9 bits (128), Expect(2) = 5e-08
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = +1

Query: 199 HPFKPPKVTFCTNIFHPNINSDGSICLGI 285
           +PFKPPKVTF T +FHPNINS+G+ICL I
Sbjct: 60  YPFKPPKVTFRTKVFHPNINSNGNICLDI 88



 Score = 28.1 bits (61), Expect(2) = 5e-08
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +2

Query: 293 KEQWIPKVTISKVLL 337
           KEQW P +TISKVLL
Sbjct: 90  KEQWSPALTISKVLL 104


>gb|EAZ32338.1| hypothetical protein OsJ_16548 [Oryza sativa Japonica Group]
          Length = 203

 Score = 53.5 bits (127), Expect(2) = 6e-08
 Identities = 22/29 (75%), Positives = 26/29 (89%)
 Frame = +1

Query: 199 HPFKPPKVTFCTNIFHPNINSDGSICLGI 285
           +PFKPPKV+F T +FHPNINS+GSICL I
Sbjct: 60  YPFKPPKVSFRTKVFHPNINSNGSICLDI 88



 Score = 28.1 bits (61), Expect(2) = 6e-08
 Identities = 12/15 (80%), Positives = 13/15 (86%)
 Frame = +2

Query: 293 KEQWIPKVTISKVLL 337
           KEQW P +TISKVLL
Sbjct: 90  KEQWSPALTISKVLL 104


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