BLASTX nr result
ID: Coptis25_contig00025529
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025529 (338 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003531948.1| PREDICTED: ubiquitin-conjugating enzyme E2-1... 58 3e-09 ref|XP_003531947.1| PREDICTED: ubiquitin-conjugating enzyme E2-1... 58 3e-09 gb|AAS20974.1| ubiquitin-conjugating enzyme 9 [Hyacinthus orient... 55 3e-08 gb|ACU23521.1| unknown [Glycine max] 54 5e-08 gb|EAZ32338.1| hypothetical protein OsJ_16548 [Oryza sativa Japo... 54 6e-08 >ref|XP_003531948.1| PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like isoform 2 [Glycine max] Length = 160 Score = 58.2 bits (139), Expect(2) = 3e-09 Identities = 23/29 (79%), Positives = 27/29 (93%) Frame = +1 Query: 199 HPFKPPKVTFCTNIFHPNINSDGSICLGI 285 +PFKPPKV+FCT +FHPNINS+GSICL I Sbjct: 72 YPFKPPKVSFCTKVFHPNINSNGSICLDI 100 Score = 28.1 bits (61), Expect(2) = 3e-09 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +2 Query: 293 KEQWIPKVTISKVLL 337 KEQW P +TISKVLL Sbjct: 102 KEQWSPALTISKVLL 116 >ref|XP_003531947.1| PREDICTED: ubiquitin-conjugating enzyme E2-17 kDa-like isoform 1 [Glycine max] Length = 148 Score = 58.2 bits (139), Expect(2) = 3e-09 Identities = 23/29 (79%), Positives = 27/29 (93%) Frame = +1 Query: 199 HPFKPPKVTFCTNIFHPNINSDGSICLGI 285 +PFKPPKV+FCT +FHPNINS+GSICL I Sbjct: 60 YPFKPPKVSFCTKVFHPNINSNGSICLDI 88 Score = 28.1 bits (61), Expect(2) = 3e-09 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +2 Query: 293 KEQWIPKVTISKVLL 337 KEQW P +TISKVLL Sbjct: 90 KEQWSPALTISKVLL 104 >gb|AAS20974.1| ubiquitin-conjugating enzyme 9 [Hyacinthus orientalis] Length = 140 Score = 54.7 bits (130), Expect(2) = 3e-08 Identities = 23/31 (74%), Positives = 26/31 (83%) Frame = +1 Query: 193 RTHPFKPPKVTFCTNIFHPNINSDGSICLGI 285 R +PFKPPKV F T +FHPNINS+GSICL I Sbjct: 50 RDYPFKPPKVAFRTKVFHPNINSNGSICLDI 80 Score = 28.1 bits (61), Expect(2) = 3e-08 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +2 Query: 293 KEQWIPKVTISKVLL 337 KEQW P +TISKVLL Sbjct: 82 KEQWSPALTISKVLL 96 >gb|ACU23521.1| unknown [Glycine max] Length = 148 Score = 53.9 bits (128), Expect(2) = 5e-08 Identities = 22/29 (75%), Positives = 26/29 (89%) Frame = +1 Query: 199 HPFKPPKVTFCTNIFHPNINSDGSICLGI 285 +PFKPPKVTF T +FHPNINS+G+ICL I Sbjct: 60 YPFKPPKVTFRTKVFHPNINSNGNICLDI 88 Score = 28.1 bits (61), Expect(2) = 5e-08 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +2 Query: 293 KEQWIPKVTISKVLL 337 KEQW P +TISKVLL Sbjct: 90 KEQWSPALTISKVLL 104 >gb|EAZ32338.1| hypothetical protein OsJ_16548 [Oryza sativa Japonica Group] Length = 203 Score = 53.5 bits (127), Expect(2) = 6e-08 Identities = 22/29 (75%), Positives = 26/29 (89%) Frame = +1 Query: 199 HPFKPPKVTFCTNIFHPNINSDGSICLGI 285 +PFKPPKV+F T +FHPNINS+GSICL I Sbjct: 60 YPFKPPKVSFRTKVFHPNINSNGSICLDI 88 Score = 28.1 bits (61), Expect(2) = 6e-08 Identities = 12/15 (80%), Positives = 13/15 (86%) Frame = +2 Query: 293 KEQWIPKVTISKVLL 337 KEQW P +TISKVLL Sbjct: 90 KEQWSPALTISKVLL 104