BLASTX nr result
ID: Coptis25_contig00025521
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025521 (801 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|2... 69 1e-20 ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putativ... 76 2e-20 ref|XP_003570445.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 69 9e-20 ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent R... 68 9e-20 ref|NP_001048584.1| Os02g0826100 [Oryza sativa Japonica Group] g... 68 1e-19 >ref|XP_002304481.1| predicted protein [Populus trichocarpa] gi|222841913|gb|EEE79460.1| predicted protein [Populus trichocarpa] Length = 798 Score = 69.3 bits (168), Expect(2) = 1e-20 Identities = 30/44 (68%), Positives = 39/44 (88%) Frame = -3 Query: 469 KVKDAWVNMDCSIKEAAYHAWLGYYNSIKEIGRDKTTLVELASR 338 K++++ +D S+KE AYHAWLGYYNSI+EIGRDKTTLVELA++ Sbjct: 722 KMEESMSKIDSSVKEGAYHAWLGYYNSIREIGRDKTTLVELANQ 765 Score = 56.6 bits (135), Expect(2) = 1e-20 Identities = 25/30 (83%), Positives = 29/30 (96%) Frame = -1 Query: 330 SIGLHKPPALFRKMAVKMGLRDIPGIRIRK 241 SIGLHKPP+LFRK A+KMGL+DIPGIRIR+ Sbjct: 769 SIGLHKPPSLFRKTALKMGLKDIPGIRIRR 798 >ref|XP_002509758.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] gi|223549657|gb|EEF51145.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis] Length = 771 Score = 76.3 bits (186), Expect(2) = 2e-20 Identities = 34/46 (73%), Positives = 41/46 (89%) Frame = -3 Query: 469 KVKDAWVNMDCSIKEAAYHAWLGYYNSIKEIGRDKTTLVELASRSC 332 KV+D+ +D S+KEAAYHAWLGYYNSI++IGRDKTTLVELA+R C Sbjct: 695 KVEDSMSKIDSSVKEAAYHAWLGYYNSIRKIGRDKTTLVELANRFC 740 Score = 48.9 bits (115), Expect(2) = 2e-20 Identities = 22/29 (75%), Positives = 26/29 (89%) Frame = -1 Query: 330 SIGLHKPPALFRKMAVKMGLRDIPGIRIR 244 SIGL +PP LFRK A+KMGL++IPGIRIR Sbjct: 742 SIGLQRPPPLFRKTALKMGLKNIPGIRIR 770 >ref|XP_003570445.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 48-like [Brachypodium distachyon] Length = 843 Score = 68.6 bits (166), Expect(2) = 9e-20 Identities = 31/49 (63%), Positives = 40/49 (81%) Frame = -3 Query: 472 RKVKDAWVNMDCSIKEAAYHAWLGYYNSIKEIGRDKTTLVELASRSCLN 326 +KV D+ +D SIKEAAYHAWLGYYNSI ++GRDK+ L +LASR C++ Sbjct: 766 QKVDDSIKIVDMSIKEAAYHAWLGYYNSIADVGRDKSMLADLASRFCVS 814 Score = 54.7 bits (130), Expect(2) = 9e-20 Identities = 24/31 (77%), Positives = 29/31 (93%) Frame = -1 Query: 333 VSIGLHKPPALFRKMAVKMGLRDIPGIRIRK 241 VSIG+ KPPAL+RK A+KMGL+D+PGIRIRK Sbjct: 813 VSIGVEKPPALYRKTALKMGLKDVPGIRIRK 843 >ref|XP_003532405.1| PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33-like [Glycine max] Length = 707 Score = 67.8 bits (164), Expect(2) = 9e-20 Identities = 29/44 (65%), Positives = 38/44 (86%) Frame = -3 Query: 469 KVKDAWVNMDCSIKEAAYHAWLGYYNSIKEIGRDKTTLVELASR 338 K++++ +D IKEAAYHAWLGYYNSI+EIGR+KTT+ ELA+R Sbjct: 631 KIENSMAKIDNDIKEAAYHAWLGYYNSIREIGREKTTMAELANR 674 Score = 55.5 bits (132), Expect(2) = 9e-20 Identities = 25/30 (83%), Positives = 28/30 (93%) Frame = -1 Query: 330 SIGLHKPPALFRKMAVKMGLRDIPGIRIRK 241 SIGL +PPALFRK A+KMGL+DIPGIRIRK Sbjct: 678 SIGLQRPPALFRKTAIKMGLKDIPGIRIRK 707 >ref|NP_001048584.1| Os02g0826100 [Oryza sativa Japonica Group] gi|75324058|sp|Q6K7R9.1|RH48_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 48 gi|48716436|dbj|BAD23043.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group] gi|113538115|dbj|BAF10498.1| Os02g0826100 [Oryza sativa Japonica Group] gi|218197440|gb|EEC79867.1| hypothetical protein OsI_21363 [Oryza sativa Indica Group] gi|222623956|gb|EEE58088.1| hypothetical protein OsJ_08955 [Oryza sativa Japonica Group] Length = 811 Score = 68.2 bits (165), Expect(2) = 1e-19 Identities = 32/47 (68%), Positives = 38/47 (80%) Frame = -3 Query: 472 RKVKDAWVNMDCSIKEAAYHAWLGYYNSIKEIGRDKTTLVELASRSC 332 RKV + +D SIKEAAYHAWLGYYNSI ++GRDKT LV+LA+R C Sbjct: 734 RKVDGSIKIVDMSIKEAAYHAWLGYYNSIGDVGRDKTMLVDLANRFC 780 Score = 54.3 bits (129), Expect(2) = 1e-19 Identities = 24/30 (80%), Positives = 28/30 (93%) Frame = -1 Query: 330 SIGLHKPPALFRKMAVKMGLRDIPGIRIRK 241 SIGL KPPAL+RK A+KMGL+D+PGIRIRK Sbjct: 782 SIGLEKPPALYRKTALKMGLKDVPGIRIRK 811