BLASTX nr result

ID: Coptis25_contig00025517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025517
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22616.3| unnamed protein product [Vitis vinifera]              125   4e-27
ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8...   125   4e-27
ref|XP_002513627.1| ATP-binding cassette transporter, putative [...   120   2e-25
ref|XP_002329680.1| white-brown-complex ABC transporter family [...   119   3e-25
ref|XP_003592180.1| ABC transporter G family member [Medicago tr...   115   3e-24

>emb|CBI22616.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  125 bits (314), Expect = 4e-27
 Identities = 67/105 (63%), Positives = 77/105 (73%)
 Frame = -2

Query: 315 LADLHLSHLANTRLASSLSGGERRRISIGXXXXXXXXXXXXDEPTSGLDSASAFNVMQTL 136
           L++L L+HLA+TRLA  LSGGERRR+SIG            DEPTSGLDS SAFNVMQTL
Sbjct: 158 LSELRLTHLAHTRLAHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSNSAFNVMQTL 217

Query: 135 QSVATSRNRTIILSIHQPSFKXXXXXXXXXXXSKGTIVHHGTLSS 1
           QS+A SR+RT+ILSIHQPSFK           SKGT++HHGTLSS
Sbjct: 218 QSIAQSRHRTVILSIHQPSFKILSTIDKVLLLSKGTVIHHGTLSS 262


>ref|XP_002276766.1| PREDICTED: ABC transporter G family member 8-like [Vitis vinifera]
          Length = 597

 Score =  125 bits (314), Expect = 4e-27
 Identities = 67/105 (63%), Positives = 77/105 (73%)
 Frame = -2

Query: 315 LADLHLSHLANTRLASSLSGGERRRISIGXXXXXXXXXXXXDEPTSGLDSASAFNVMQTL 136
           L++L L+HLA+TRLA  LSGGERRR+SIG            DEPTSGLDS SAFNVMQTL
Sbjct: 150 LSELRLTHLAHTRLAHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSNSAFNVMQTL 209

Query: 135 QSVATSRNRTIILSIHQPSFKXXXXXXXXXXXSKGTIVHHGTLSS 1
           QS+A SR+RT+ILSIHQPSFK           SKGT++HHGTLSS
Sbjct: 210 QSIAQSRHRTVILSIHQPSFKILSTIDKVLLLSKGTVIHHGTLSS 254


>ref|XP_002513627.1| ATP-binding cassette transporter, putative [Ricinus communis]
           gi|223547535|gb|EEF49030.1| ATP-binding cassette
           transporter, putative [Ricinus communis]
          Length = 442

 Score =  120 bits (300), Expect = 2e-25
 Identities = 66/105 (62%), Positives = 74/105 (70%)
 Frame = -2

Query: 315 LADLHLSHLANTRLASSLSGGERRRISIGXXXXXXXXXXXXDEPTSGLDSASAFNVMQTL 136
           L +L+L+HLAN RLA  LSGGERRR+SIG            DEPTSGLDS SA NVMQTL
Sbjct: 171 LRELNLTHLANARLAIGLSGGERRRVSIGLSLLQDPRFLLLDEPTSGLDSKSALNVMQTL 230

Query: 135 QSVATSRNRTIILSIHQPSFKXXXXXXXXXXXSKGTIVHHGTLSS 1
           +S+ATSR RT+ILSIHQPSFK           SKGT+VHHGTL S
Sbjct: 231 KSIATSRLRTVILSIHQPSFKILSTIDNILLLSKGTVVHHGTLFS 275


>ref|XP_002329680.1| white-brown-complex ABC transporter family [Populus trichocarpa]
           gi|222870588|gb|EEF07719.1| white-brown-complex ABC
           transporter family [Populus trichocarpa]
          Length = 593

 Score =  119 bits (298), Expect = 3e-25
 Identities = 64/105 (60%), Positives = 74/105 (70%)
 Frame = -2

Query: 315 LADLHLSHLANTRLASSLSGGERRRISIGXXXXXXXXXXXXDEPTSGLDSASAFNVMQTL 136
           L +L+L+HLAN RLA  LSGGERRR+SIG            DEPTSGLDS SA NVMQTL
Sbjct: 146 LNELNLTHLANARLAHGLSGGERRRVSIGLSLLHDPGILLLDEPTSGLDSKSALNVMQTL 205

Query: 135 QSVATSRNRTIILSIHQPSFKXXXXXXXXXXXSKGTIVHHGTLSS 1
           +S+ATSR RT+ILSIHQPSF            +KGT+VHHG+LSS
Sbjct: 206 KSIATSRYRTVILSIHQPSFNILSTIDKILLLNKGTVVHHGSLSS 250


>ref|XP_003592180.1| ABC transporter G family member [Medicago truncatula]
           gi|355481228|gb|AES62431.1| ABC transporter G family
           member [Medicago truncatula]
          Length = 610

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/105 (60%), Positives = 72/105 (68%)
 Frame = -2

Query: 315 LADLHLSHLANTRLASSLSGGERRRISIGXXXXXXXXXXXXDEPTSGLDSASAFNVMQTL 136
           L +L L+HLANTRL   LSGGERRR+SIG            DEPTSGLDS+SAF VMQTL
Sbjct: 150 LNELRLTHLANTRLNHGLSGGERRRVSIGLSLLHDPAVLLLDEPTSGLDSSSAFKVMQTL 209

Query: 135 QSVATSRNRTIILSIHQPSFKXXXXXXXXXXXSKGTIVHHGTLSS 1
           +S   S NRTI+LSIHQPSFK           SKGT+VHHG+L+S
Sbjct: 210 KSTCVSYNRTIVLSIHQPSFKILSCIDRILLLSKGTVVHHGSLAS 254


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