BLASTX nr result

ID: Coptis25_contig00025513 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025513
         (489 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322738.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23
ref|XP_002309293.1| predicted protein [Populus trichocarpa] gi|2...   110   2e-22
ref|XP_003632681.1| PREDICTED: uncharacterized protein LOC100257...   106   2e-21
emb|CBI29995.3| unnamed protein product [Vitis vinifera]              106   2e-21
ref|XP_004171604.1| PREDICTED: uncharacterized protein LOC101226...   100   2e-19

>ref|XP_002322738.1| predicted protein [Populus trichocarpa] gi|222867368|gb|EEF04499.1|
           predicted protein [Populus trichocarpa]
          Length = 1180

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/92 (61%), Positives = 63/92 (68%)
 Frame = -2

Query: 278 MPGLPQRNVQFXXXXXXXXXXXXXXXXXXXXXXXSKHRDDISFDQLQKFWNELPPHARQE 99
           MPGL QRN QF                        KHRDD+SF+QLQKFW+ELPP ARQ+
Sbjct: 1   MPGLAQRNEQFRNATSSGGSYSISANGFWS-----KHRDDVSFNQLQKFWSELPPQARQK 55

Query: 98  LLKIDKQTLLEQARKNLYCSRCNGLLLEGFSQ 3
           LL+IDKQTL EQARKN+YCSRCNGLLLEGF Q
Sbjct: 56  LLRIDKQTLFEQARKNMYCSRCNGLLLEGFMQ 87


>ref|XP_002309293.1| predicted protein [Populus trichocarpa] gi|222855269|gb|EEE92816.1|
           predicted protein [Populus trichocarpa]
          Length = 1222

 Score =  110 bits (274), Expect = 2e-22
 Identities = 56/92 (60%), Positives = 62/92 (67%)
 Frame = -2

Query: 278 MPGLPQRNVQFXXXXXXXXXXXXXXXXXXXXXXXSKHRDDISFDQLQKFWNELPPHARQE 99
           MPGL QRN QF                        KHRDD+SF+QLQKFW+ELPP ARQ+
Sbjct: 1   MPGLTQRNDQFSNATSSGGSYSISANSFWS-----KHRDDVSFNQLQKFWSELPPQARQK 55

Query: 98  LLKIDKQTLLEQARKNLYCSRCNGLLLEGFSQ 3
           LL+IDKQ L EQARKN+YCSRCNGLLLEGF Q
Sbjct: 56  LLRIDKQALFEQARKNMYCSRCNGLLLEGFMQ 87


>ref|XP_003632681.1| PREDICTED: uncharacterized protein LOC100257222 [Vitis vinifera]
          Length = 1284

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/57 (85%), Positives = 53/57 (92%)
 Frame = -2

Query: 173 KHRDDISFDQLQKFWNELPPHARQELLKIDKQTLLEQARKNLYCSRCNGLLLEGFSQ 3
           KHRDDISF+QLQKFW+EL P ARQELL+IDKQTL EQARKN+YCSRCNGLLLEGF Q
Sbjct: 34  KHRDDISFNQLQKFWSELSPQARQELLRIDKQTLFEQARKNMYCSRCNGLLLEGFLQ 90


>emb|CBI29995.3| unnamed protein product [Vitis vinifera]
          Length = 1196

 Score =  106 bits (265), Expect = 2e-21
 Identities = 49/57 (85%), Positives = 53/57 (92%)
 Frame = -2

Query: 173 KHRDDISFDQLQKFWNELPPHARQELLKIDKQTLLEQARKNLYCSRCNGLLLEGFSQ 3
           KHRDDISF+QLQKFW+EL P ARQELL+IDKQTL EQARKN+YCSRCNGLLLEGF Q
Sbjct: 34  KHRDDISFNQLQKFWSELSPQARQELLRIDKQTLFEQARKNMYCSRCNGLLLEGFLQ 90


>ref|XP_004171604.1| PREDICTED: uncharacterized protein LOC101226631, partial [Cucumis
           sativus]
          Length = 164

 Score =  100 bits (248), Expect = 2e-19
 Identities = 44/57 (77%), Positives = 53/57 (92%)
 Frame = -2

Query: 173 KHRDDISFDQLQKFWNELPPHARQELLKIDKQTLLEQARKNLYCSRCNGLLLEGFSQ 3
           +HRDD+S++QLQKFW++L P ARQ+LL+IDKQTL EQARKN+YCSRCNGLLLEGF Q
Sbjct: 29  QHRDDVSYNQLQKFWSDLLPQARQKLLRIDKQTLFEQARKNMYCSRCNGLLLEGFLQ 85


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