BLASTX nr result

ID: Coptis25_contig00025512 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025512
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524242.1| zinc ion binding protein, putative [Ricinus ...   124   1e-26
ref|XP_004149955.1| PREDICTED: protein DA1-related 2-like [Cucum...   122   3e-26
ref|XP_004164259.1| PREDICTED: LOW QUALITY PROTEIN: protein DA1-...   119   2e-25
ref|XP_002316256.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25
dbj|BAK00378.1| predicted protein [Hordeum vulgare subsp. vulgar...   118   4e-25

>ref|XP_002524242.1| zinc ion binding protein, putative [Ricinus communis]
           gi|223536519|gb|EEF38166.1| zinc ion binding protein,
           putative [Ricinus communis]
          Length = 498

 Score =  124 bits (310), Expect = 1e-26
 Identities = 66/108 (61%), Positives = 70/108 (64%)
 Frame = -3

Query: 335 KGYKNLNPEVEEGICQVLSHMWLESEVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEKK 156
           KGY+NLNPEVEEGICQVLS+MWLESEV+                             E K
Sbjct: 394 KGYRNLNPEVEEGICQVLSYMWLESEVLPSKGMPSTSAASSSSSSSKKGGKSNA---ENK 450

Query: 155 LGEFFMHQIANDTSTAYGRGFRNANVAVNKYSLCRTLDHIRLTGSFPV 12
           LGEFFMHQIAND S AYG GFR AN AVNKY L RTLDHIRLTG FP+
Sbjct: 451 LGEFFMHQIANDASPAYGGGFRAANAAVNKYGLRRTLDHIRLTGHFPL 498


>ref|XP_004149955.1| PREDICTED: protein DA1-related 2-like [Cucumis sativus]
          Length = 515

 Score =  122 bits (306), Expect = 3e-26
 Identities = 66/114 (57%), Positives = 70/114 (61%), Gaps = 6/114 (5%)
 Frame = -3

Query: 335 KGYKNLNPEVEEGICQVLSHMWLESEVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXL--- 165
           KGY+NLNPEVEEGICQVLS+MWLESEV+                                
Sbjct: 402 KGYRNLNPEVEEGICQVLSYMWLESEVMPGFKSGPSTSTASSSSSSSSSHYSLSSKKGGR 461

Query: 164 ---EKKLGEFFMHQIANDTSTAYGRGFRNANVAVNKYSLCRTLDHIRLTGSFPV 12
              E KLGEFFMHQIAND S AYG GFR AN AVNKY L RTLDHI +TGSFPV
Sbjct: 462 SSAENKLGEFFMHQIANDASAAYGEGFRAANAAVNKYGLRRTLDHISMTGSFPV 515


>ref|XP_004164259.1| PREDICTED: LOW QUALITY PROTEIN: protein DA1-related 2-like [Cucumis
           sativus]
          Length = 515

 Score =  119 bits (299), Expect = 2e-25
 Identities = 65/114 (57%), Positives = 69/114 (60%), Gaps = 6/114 (5%)
 Frame = -3

Query: 335 KGYKNLNPEVEEGICQVLSHMWLESEVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXL--- 165
           KGY+NLNPEVEEGICQVLS+MWLESEV+                                
Sbjct: 402 KGYRNLNPEVEEGICQVLSYMWLESEVMPGFKSGPSTSTASSSSSSSSSHYSLSSKKGGR 461

Query: 164 ---EKKLGEFFMHQIANDTSTAYGRGFRNANVAVNKYSLCRTLDHIRLTGSFPV 12
              E KLGE FMHQIAND S AYG GFR AN AVNKY L RTLDHI +TGSFPV
Sbjct: 462 SSAENKLGEXFMHQIANDASAAYGEGFRAANAAVNKYGLRRTLDHISMTGSFPV 515


>ref|XP_002316256.1| predicted protein [Populus trichocarpa] gi|222865296|gb|EEF02427.1|
           predicted protein [Populus trichocarpa]
          Length = 481

 Score =  119 bits (297), Expect = 3e-25
 Identities = 62/109 (56%), Positives = 72/109 (66%), Gaps = 1/109 (0%)
 Frame = -3

Query: 335 KGYKNLNPEVEEGICQVLSHMWLESEVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXL-EK 159
           KGY+NLNPEVEEGICQVLS+MWLESE+                               EK
Sbjct: 373 KGYRNLNPEVEEGICQVLSYMWLESELPGSKGMPSTSTSAASSSSSSSSSKKGEKSQVEK 432

Query: 158 KLGEFFMHQIANDTSTAYGRGFRNANVAVNKYSLCRTLDHIRLTGSFPV 12
           KLG+FFMHQIA+D + AYG GFR+AN AV+KY L RTLDHIRLTG+FP+
Sbjct: 433 KLGDFFMHQIAHDATPAYGEGFRSANAAVSKYGLRRTLDHIRLTGNFPL 481


>dbj|BAK00378.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326529583|dbj|BAK04738.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 508

 Score =  118 bits (296), Expect = 4e-25
 Identities = 63/114 (55%), Positives = 72/114 (63%), Gaps = 6/114 (5%)
 Frame = -3

Query: 335 KGYKNLNPEVEEGICQVLSHMWLESEVIXXXXXXXXXXXXXXXXXXXXXXXXXXXXL--- 165
           KGY+NL+PEVEEGICQV+S++WLESE++                                
Sbjct: 395 KGYRNLSPEVEEGICQVMSYLWLESEILPASTRHAQPSTSYASSSSSSSYRPPSSKKGGI 454

Query: 164 ---EKKLGEFFMHQIANDTSTAYGRGFRNANVAVNKYSLCRTLDHIRLTGSFPV 12
              EKKLGEFFMHQIANDTSTAYG GFR A  AVNKY L +TL+HIRLTG FPV
Sbjct: 455 SHTEKKLGEFFMHQIANDTSTAYGDGFRTAYKAVNKYGLRQTLNHIRLTGGFPV 508


Top