BLASTX nr result

ID: Coptis25_contig00025507 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025507
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]    106   2e-21
ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [...   105   3e-21
ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycin...   105   3e-21
emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia fab...   104   9e-21
ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [...   103   2e-20

>gb|AAD48018.1| Rab GTP-binding protein Rab11a [Gossypium hirsutum]
          Length = 224

 Score =  106 bits (265), Expect = 2e-21
 Identities = 51/57 (89%), Positives = 56/57 (98%)
 Frame = +1

Query: 151 MAFSTEEQQTEDYLFKIVLIGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKMD 321
           MAF +EE++TEDYLFKIVL+GDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQK+D
Sbjct: 1   MAFVSEEEKTEDYLFKIVLVGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKLD 57


>ref|XP_003536164.1| PREDICTED: ras-related protein RABA5a-like [Glycine max]
          Length = 223

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = +1

Query: 151 MAFSTEEQQTEDYLFKIVLIGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKMD 321
           MAF  EE++TEDYLFKIVLIGDSAVGKSNLLARFAR+EFYPNSKSTIGVEFQTQKMD
Sbjct: 1   MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMD 57


>ref|NP_001242668.1| uncharacterized protein LOC100789187 [Glycine max]
           gi|255641449|gb|ACU21000.1| unknown [Glycine max]
          Length = 226

 Score =  105 bits (263), Expect = 3e-21
 Identities = 52/57 (91%), Positives = 55/57 (96%)
 Frame = +1

Query: 151 MAFSTEEQQTEDYLFKIVLIGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKMD 321
           MAF  EE++TEDYLFKIVLIGDSAVGKSNLLARFAR+EFYPNSKSTIGVEFQTQKMD
Sbjct: 1   MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKMD 57


>emb|CAA82710.1| guanine nucleotide regulatory protein [Vicia faba]
           gi|1098296|prf||2115367D small GTP-binding protein
          Length = 223

 Score =  104 bits (259), Expect = 9e-21
 Identities = 51/57 (89%), Positives = 55/57 (96%)
 Frame = +1

Query: 151 MAFSTEEQQTEDYLFKIVLIGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKMD 321
           MAF  EE++TEDYLFKIVLIGDSAVGKSNLLARFAR+EFYPNSKSTIGVEFQTQKM+
Sbjct: 1   MAFYNEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKME 57


>ref|XP_004139534.1| PREDICTED: ras-related protein RABA5a-like [Cucumis sativus]
           gi|449508980|ref|XP_004163459.1| PREDICTED: LOW QUALITY
           PROTEIN: ras-related protein RABA5a-like [Cucumis
           sativus]
          Length = 224

 Score =  103 bits (256), Expect = 2e-20
 Identities = 50/57 (87%), Positives = 56/57 (98%)
 Frame = +1

Query: 151 MAFSTEEQQTEDYLFKIVLIGDSAVGKSNLLARFARNEFYPNSKSTIGVEFQTQKMD 321
           MAF +EE++TEDYLFKIVLIGDSAVGKSNLLARFAR+EFYPNSKSTIGVEFQTQK++
Sbjct: 1   MAFYSEEEKTEDYLFKIVLIGDSAVGKSNLLARFARDEFYPNSKSTIGVEFQTQKIE 57


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