BLASTX nr result

ID: Coptis25_contig00025504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025504
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252...    94   1e-17
emb|CBI23013.3| unnamed protein product [Vitis vinifera]               94   1e-17
emb|CAN73471.1| hypothetical protein VITISV_039356 [Vitis vinifera]    94   1e-17
ref|XP_003588509.1| hypothetical protein MTR_1g007990 [Medicago ...    82   3e-14
ref|XP_003550866.1| PREDICTED: uncharacterized protein LOC100815...    80   1e-13

>ref|XP_002272676.2| PREDICTED: uncharacterized protein LOC100252197 [Vitis vinifera]
          Length = 1887

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/100 (48%), Positives = 67/100 (67%)
 Frame = -2

Query: 310  FMNEKELIVRQIEEKGNTAASIICKMQKVIMPQGLQDNLMHGIIGVVALIGTVTDNKLSR 131
            ++++KE ++R IE+K  +AA+  C + + I  Q     LM  I+GVVAL+ TV  N+L R
Sbjct: 1568 YLSKKESVMRCIEKKDKSAAAFFCNLSREIPFQDPVSQLMKDIVGVVALLATVRINRLGR 1627

Query: 130  ILAKYLGEDHMLAVVCESYETASTLERYGEHGNVNHNSAI 11
            +LA+YLGED MLAVVC SYE AS LE+Y   G V+   A+
Sbjct: 1628 MLAEYLGEDQMLAVVCRSYEAASKLEKYEWDGKVDREHAL 1667


>emb|CBI23013.3| unnamed protein product [Vitis vinifera]
          Length = 1718

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/100 (48%), Positives = 67/100 (67%)
 Frame = -2

Query: 310  FMNEKELIVRQIEEKGNTAASIICKMQKVIMPQGLQDNLMHGIIGVVALIGTVTDNKLSR 131
            ++++KE ++R IE+K  +AA+  C + + I  Q     LM  I+GVVAL+ TV  N+L R
Sbjct: 1399 YLSKKESVMRCIEKKDKSAAAFFCNLSREIPFQDPVSQLMKDIVGVVALLATVRINRLGR 1458

Query: 130  ILAKYLGEDHMLAVVCESYETASTLERYGEHGNVNHNSAI 11
            +LA+YLGED MLAVVC SYE AS LE+Y   G V+   A+
Sbjct: 1459 MLAEYLGEDQMLAVVCRSYEAASKLEKYEWDGKVDREHAL 1498


>emb|CAN73471.1| hypothetical protein VITISV_039356 [Vitis vinifera]
          Length = 1117

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 48/100 (48%), Positives = 67/100 (67%)
 Frame = -2

Query: 310 FMNEKELIVRQIEEKGNTAASIICKMQKVIMPQGLQDNLMHGIIGVVALIGTVTDNKLSR 131
           ++++KE ++R IE+K  +AA+  C + + I  Q     LM  I+GVVAL+ TV  N+L R
Sbjct: 439 YLSKKESVMRCIEKKDKSAAAFFCNLSREIPFQDPVSQLMKDIVGVVALLATVRINRLGR 498

Query: 130 ILAKYLGEDHMLAVVCESYETASTLERYGEHGNVNHNSAI 11
           +LA+YLGED MLAVVC SYE AS LE+Y   G V+   A+
Sbjct: 499 MLAEYLGEDQMLAVVCRSYEAASKLEKYEWDGKVDREHAL 538



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
 Frame = -2

Query: 286  VRQIEEKGNTAASIICKMQKVIMPQGLQDNLMHGIIGVVALIGTVTDNKLSRILAKYLGE 107
            V QI +   +AA+I+C+++     Q     L   ++G+VA +G V D  LSR+ ++YLG 
Sbjct: 875  VEQILKYEKSAAAILCQLKIRHGSQASHLTLAKDVLGIVATLGKVDDENLSRLFSEYLGL 934

Query: 106  DHMLAVVCESYETASTLERYG-EHGNVNHNSA 14
            + M+A+VC++YE   TLE Y  E   +N +SA
Sbjct: 935  ETMMAIVCKTYEGVKTLETYDFEVNMINVDSA 966


>ref|XP_003588509.1| hypothetical protein MTR_1g007990 [Medicago truncatula]
            gi|355477557|gb|AES58760.1| hypothetical protein
            MTR_1g007990 [Medicago truncatula]
          Length = 1009

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 45/112 (40%), Positives = 72/112 (64%), Gaps = 1/112 (0%)
 Frame = -2

Query: 343  VDPQQLRHLDY-FMNEKELIVRQIEEKGNTAASIICKMQKVIMPQGLQDNLMHGIIGVVA 167
            V   QL + D  F   KE +  +I+   N+AAS++C +      +  Q++ +  IIGVVA
Sbjct: 681  VQHYQLGNADLLFATTKEEMTTKIKNMENSAASVLCSLSA---REKQQNHFLEDIIGVVA 737

Query: 166  LIGTVTDNKLSRILAKYLGEDHMLAVVCESYETASTLERYGEHGNVNHNSAI 11
            L+G+V   +LSR+LA+YLGED ML V+C S +TA +LE+Y ++G +++  A+
Sbjct: 738  LLGSVQSPELSRMLAEYLGEDQMLGVICRSLDTAISLEKYKQNGEIDYVHAL 789


>ref|XP_003550866.1| PREDICTED: uncharacterized protein LOC100815144 [Glycine max]
          Length = 1261

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 45/114 (39%), Positives = 69/114 (60%)
 Frame = -2

Query: 343  VDPQQLRHLDYFMNEKELIVRQIEEKGNTAASIICKMQKVIMPQGLQDNLMHGIIGVVAL 164
            V+P QL  +D    + EL+ + I    N+  S++C + K   P       +  +IGVVAL
Sbjct: 934  VEPYQLSIMDSSFTKDELMTK-IRSMENSPYSVLCSLSKREKPPNY---FLEDLIGVVAL 989

Query: 163  IGTVTDNKLSRILAKYLGEDHMLAVVCESYETASTLERYGEHGNVNHNSAIATE 2
            IGTV   +LSRILA+YLGE  ML ++  S++TAS+LE+Y + G +++  A+  E
Sbjct: 990  IGTVQRPELSRILAEYLGEAKMLGLIYRSFDTASSLEKYNQKGEIDYERALHAE 1043


Top