BLASTX nr result

ID: Coptis25_contig00025492 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025492
         (269 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003520518.1| PREDICTED: DTW domain-containing protein 2-l...   119   3e-25
ref|XP_004163694.1| PREDICTED: LOW QUALITY PROTEIN: DTW domain-c...   117   1e-24
ref|XP_004149400.1| PREDICTED: DTW domain-containing protein 2-l...   117   1e-24
ref|XP_002278498.1| PREDICTED: DTW domain-containing protein 2-l...   112   2e-23
ref|XP_002308031.1| predicted protein [Populus trichocarpa] gi|2...   112   3e-23

>ref|XP_003520518.1| PREDICTED: DTW domain-containing protein 2-like [Glycine max]
          Length = 242

 Score =  119 bits (298), Expect = 3e-25
 Identities = 59/89 (66%), Positives = 72/89 (80%)
 Frame = -3

Query: 267 LIVFDGTWKHAKEMVSASLPFLSKFASQVCLNYDVAVDGETIFDSELVLRKEPFSGCMST 88
           LI FD TW+HA+EMVSAS  FLSKFA++VCL  D +  G +I+DSELVLRKEP +GC+ST
Sbjct: 122 LIAFDATWQHAREMVSASEEFLSKFATRVCLGIDESSSGGSIYDSELVLRKEPSAGCVST 181

Query: 87  IEVVARSLRVLESNGIEIEEVLISVLRAM 1
           +E VAR+LRVLE NG+EIE  L+ VLR M
Sbjct: 182 MEAVARALRVLEPNGVEIEARLVGVLREM 210


>ref|XP_004163694.1| PREDICTED: LOW QUALITY PROTEIN: DTW domain-containing protein
           2-like [Cucumis sativus]
          Length = 246

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/89 (64%), Positives = 71/89 (79%)
 Frame = -3

Query: 267 LIVFDGTWKHAKEMVSASLPFLSKFASQVCLNYDVAVDGETIFDSELVLRKEPFSGCMST 88
           LI FDGTWKHAKEMV +S  +LS+FA +VCL+ D +V+G +IFDSEL+LRKEP  GC+ST
Sbjct: 126 LIAFDGTWKHAKEMVRSSEEYLSRFARRVCLDIDESVEGGSIFDSELILRKEPHGGCVST 185

Query: 87  IEVVARSLRVLESNGIEIEEVLISVLRAM 1
           +E VAR LRV+E +G  +EE LI VLR M
Sbjct: 186 MEAVARCLRVMELDGAAVEEKLIGVLREM 214


>ref|XP_004149400.1| PREDICTED: DTW domain-containing protein 2-like [Cucumis sativus]
          Length = 246

 Score =  117 bits (293), Expect = 1e-24
 Identities = 57/89 (64%), Positives = 71/89 (79%)
 Frame = -3

Query: 267 LIVFDGTWKHAKEMVSASLPFLSKFASQVCLNYDVAVDGETIFDSELVLRKEPFSGCMST 88
           LI FDGTWKHAKEMV +S  +LS+FA +VCL+ D +V+G +IFDSEL+LRKEP  GC+ST
Sbjct: 126 LIAFDGTWKHAKEMVRSSEEYLSRFARRVCLDIDESVEGGSIFDSELILRKEPHGGCVST 185

Query: 87  IEVVARSLRVLESNGIEIEEVLISVLRAM 1
           +E VAR LRV+E +G  +EE LI VLR M
Sbjct: 186 MEAVARCLRVMELDGAAVEEKLIGVLREM 214


>ref|XP_002278498.1| PREDICTED: DTW domain-containing protein 2-like [Vitis vinifera]
          Length = 254

 Score =  112 bits (281), Expect = 2e-23
 Identities = 56/89 (62%), Positives = 67/89 (75%)
 Frame = -3

Query: 267 LIVFDGTWKHAKEMVSASLPFLSKFASQVCLNYDVAVDGETIFDSELVLRKEPFSGCMST 88
           LI+FD TWKHAKEMV AS  +LS FA + CL+ D    G +IFDSEL+LRKEPF GC+ST
Sbjct: 140 LILFDATWKHAKEMVDASAEYLSTFAIRACLDCDFGETGGSIFDSELILRKEPFRGCVST 199

Query: 87  IEVVARSLRVLESNGIEIEEVLISVLRAM 1
           +E  AR+LR LE NG EIE  L++VLR M
Sbjct: 200 MEAAARALRFLEPNGPEIESRLLNVLREM 228


>ref|XP_002308031.1| predicted protein [Populus trichocarpa] gi|222854007|gb|EEE91554.1|
           predicted protein [Populus trichocarpa]
          Length = 247

 Score =  112 bits (280), Expect = 3e-23
 Identities = 55/90 (61%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = -3

Query: 267 LIVFDGTWKHAKEMVSASLPFLSKFASQVCLN-YDVAVDGETIFDSELVLRKEPFSGCMS 91
           LIVFD TWKHAKEMVSAS  +LS+FA++VCL+ +D  ++G +I+DS+LVLRKEP  GC+S
Sbjct: 125 LIVFDATWKHAKEMVSASEGYLSRFATRVCLDGFDGGIEGGSIYDSDLVLRKEPCGGCVS 184

Query: 90  TIEVVARSLRVLESNGIEIEEVLISVLRAM 1
           T+E VAR L V+E NG+EIE+ L+ +L+ M
Sbjct: 185 TLEAVARWLGVVEENGLEIEDRLVGLLKEM 214


Top