BLASTX nr result

ID: Coptis25_contig00025472 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025472
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310443.1| predicted protein [Populus trichocarpa] gi|2...    67   1e-21
ref|XP_002889573.1| hypothetical protein ARALYDRAFT_470601 [Arab...    65   5e-21
ref|XP_002327855.1| predicted protein [Populus trichocarpa] gi|2...    64   2e-20
ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig...    65   2e-20
ref|XP_003597487.1| hypothetical protein MTR_2g098580 [Medicago ...    65   2e-20

>ref|XP_002310443.1| predicted protein [Populus trichocarpa] gi|222853346|gb|EEE90893.1|
           predicted protein [Populus trichocarpa]
          Length = 569

 Score = 66.6 bits (161), Expect(2) = 1e-21
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +3

Query: 138 VTKWILKNSDESENVNWILANPKACPECKRPLEEEYG 248
           VTKWILKNS ESEN+NWILAN K CP+CKRP+E+  G
Sbjct: 282 VTKWILKNSAESENMNWILANSKPCPKCKRPIEKNQG 318



 Score = 61.2 bits (147), Expect(2) = 1e-21
 Identities = 30/56 (53%), Positives = 36/56 (64%), Gaps = 11/56 (19%)
 Frame = +2

Query: 2   YSRYLLRTFVESNHKIKWCPALGYENAIDFEVGSESYNV-----------CAEDAH 136
           YSRYLLR+++E N K KWCPA G E AIDF  GS S++V           CAE+AH
Sbjct: 219 YSRYLLRSYIEDNRKTKWCPAPGCEYAIDFAAGSGSFDVSCLCSHSFCWNCAEEAH 274


>ref|XP_002889573.1| hypothetical protein ARALYDRAFT_470601 [Arabidopsis lyrata subsp.
           lyrata] gi|297335415|gb|EFH65832.1| hypothetical protein
           ARALYDRAFT_470601 [Arabidopsis lyrata subsp. lyrata]
          Length = 557

 Score = 64.7 bits (156), Expect(2) = 5e-21
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +3

Query: 138 VTKWILKNSDESENVNWILANPKACPECKRPLEEEYG 248
           V KWILKNS ESEN+NWILAN K CP CKRP+E+ +G
Sbjct: 271 VGKWILKNSAESENMNWILANSKPCPRCKRPIEKNHG 307



 Score = 61.2 bits (147), Expect(2) = 5e-21
 Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 11/56 (19%)
 Frame = +2

Query: 2   YSRYLLRTFVESNHKIKWCPALGYENAIDFEVGSESYNV-----------CAEDAH 136
           Y RY LR++VE N K+KWCPA G E+AIDF  G+ESY+V           C E+AH
Sbjct: 208 YYRYFLRSYVEDNRKMKWCPAPGCEHAIDFAAGTESYDVSCLCSHSFCWNCTEEAH 263


>ref|XP_002327855.1| predicted protein [Populus trichocarpa] gi|222837264|gb|EEE75643.1|
           predicted protein [Populus trichocarpa]
          Length = 546

 Score = 64.3 bits (155), Expect(2) = 2e-20
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +3

Query: 138 VTKWILKNSDESENVNWILANPKACPECKRPLEEEYG 248
           V KWILKNS ESEN+NWILAN K CP+CKRP+E+  G
Sbjct: 260 VEKWILKNSAESENMNWILANSKPCPKCKRPIEKNQG 296



 Score = 59.7 bits (143), Expect(2) = 2e-20
 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 11/56 (19%)
 Frame = +2

Query: 2   YSRYLLRTFVESNHKIKWCPALGYENAIDFEVGSESYNV-----------CAEDAH 136
           YSRYLLR++VE N K KWCPA G E A+DF  GS S++V           C E+AH
Sbjct: 197 YSRYLLRSYVEGNRKTKWCPAPGCEYAVDFAAGSGSFDVSCLCSHSFCWNCVEEAH 252


>ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis
           vinifera]
          Length = 652

 Score = 64.7 bits (156), Expect(2) = 2e-20
 Identities = 27/37 (72%), Positives = 31/37 (83%)
 Frame = +3

Query: 138 VTKWILKNSDESENVNWILANPKACPECKRPLEEEYG 248
           V KWILKNS ESEN+NWILAN K CP+CKRP+E+  G
Sbjct: 334 VAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQG 370



 Score = 58.9 bits (141), Expect(2) = 2e-20
 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 11/56 (19%)
 Frame = +2

Query: 2   YSRYLLRTFVESNHKIKWCPALGYENAIDFEVGSESYNV-----------CAEDAH 136
           YSRY LR+++E N K KWCPA G + A+DF VGS SY+V           C E+AH
Sbjct: 271 YSRYFLRSYIEDNRKTKWCPAPGCDYAVDFIVGSGSYDVSCRCSYSFCWNCTEEAH 326


>ref|XP_003597487.1| hypothetical protein MTR_2g098580 [Medicago truncatula]
           gi|355486535|gb|AES67738.1| hypothetical protein
           MTR_2g098580 [Medicago truncatula]
          Length = 597

 Score = 65.1 bits (157), Expect(2) = 2e-20
 Identities = 27/37 (72%), Positives = 32/37 (86%)
 Frame = +3

Query: 138 VTKWILKNSDESENVNWILANPKACPECKRPLEEEYG 248
           V+KWILKNS ESEN+NWILAN K CP+CKRP+E+  G
Sbjct: 281 VSKWILKNSAESENMNWILANSKPCPKCKRPIEKNQG 317



 Score = 58.5 bits (140), Expect(2) = 2e-20
 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 11/56 (19%)
 Frame = +2

Query: 2   YSRYLLRTFVESNHKIKWCPALGYENAIDFEVGSESYNV-----------CAEDAH 136
           Y RYL+R+++E N K KWCPA G E+A++F+ G E+Y+V           C E+AH
Sbjct: 218 YDRYLIRSYIEDNKKTKWCPAPGCEHAVNFDAGGENYDVSCLCSYSFCWNCTEEAH 273


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