BLASTX nr result
ID: Coptis25_contig00025472
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025472 (270 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002310443.1| predicted protein [Populus trichocarpa] gi|2... 67 1e-21 ref|XP_002889573.1| hypothetical protein ARALYDRAFT_470601 [Arab... 65 5e-21 ref|XP_002327855.1| predicted protein [Populus trichocarpa] gi|2... 64 2e-20 ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein lig... 65 2e-20 ref|XP_003597487.1| hypothetical protein MTR_2g098580 [Medicago ... 65 2e-20 >ref|XP_002310443.1| predicted protein [Populus trichocarpa] gi|222853346|gb|EEE90893.1| predicted protein [Populus trichocarpa] Length = 569 Score = 66.6 bits (161), Expect(2) = 1e-21 Identities = 28/37 (75%), Positives = 32/37 (86%) Frame = +3 Query: 138 VTKWILKNSDESENVNWILANPKACPECKRPLEEEYG 248 VTKWILKNS ESEN+NWILAN K CP+CKRP+E+ G Sbjct: 282 VTKWILKNSAESENMNWILANSKPCPKCKRPIEKNQG 318 Score = 61.2 bits (147), Expect(2) = 1e-21 Identities = 30/56 (53%), Positives = 36/56 (64%), Gaps = 11/56 (19%) Frame = +2 Query: 2 YSRYLLRTFVESNHKIKWCPALGYENAIDFEVGSESYNV-----------CAEDAH 136 YSRYLLR+++E N K KWCPA G E AIDF GS S++V CAE+AH Sbjct: 219 YSRYLLRSYIEDNRKTKWCPAPGCEYAIDFAAGSGSFDVSCLCSHSFCWNCAEEAH 274 >ref|XP_002889573.1| hypothetical protein ARALYDRAFT_470601 [Arabidopsis lyrata subsp. lyrata] gi|297335415|gb|EFH65832.1| hypothetical protein ARALYDRAFT_470601 [Arabidopsis lyrata subsp. lyrata] Length = 557 Score = 64.7 bits (156), Expect(2) = 5e-21 Identities = 27/37 (72%), Positives = 31/37 (83%) Frame = +3 Query: 138 VTKWILKNSDESENVNWILANPKACPECKRPLEEEYG 248 V KWILKNS ESEN+NWILAN K CP CKRP+E+ +G Sbjct: 271 VGKWILKNSAESENMNWILANSKPCPRCKRPIEKNHG 307 Score = 61.2 bits (147), Expect(2) = 5e-21 Identities = 29/56 (51%), Positives = 36/56 (64%), Gaps = 11/56 (19%) Frame = +2 Query: 2 YSRYLLRTFVESNHKIKWCPALGYENAIDFEVGSESYNV-----------CAEDAH 136 Y RY LR++VE N K+KWCPA G E+AIDF G+ESY+V C E+AH Sbjct: 208 YYRYFLRSYVEDNRKMKWCPAPGCEHAIDFAAGTESYDVSCLCSHSFCWNCTEEAH 263 >ref|XP_002327855.1| predicted protein [Populus trichocarpa] gi|222837264|gb|EEE75643.1| predicted protein [Populus trichocarpa] Length = 546 Score = 64.3 bits (155), Expect(2) = 2e-20 Identities = 27/37 (72%), Positives = 31/37 (83%) Frame = +3 Query: 138 VTKWILKNSDESENVNWILANPKACPECKRPLEEEYG 248 V KWILKNS ESEN+NWILAN K CP+CKRP+E+ G Sbjct: 260 VEKWILKNSAESENMNWILANSKPCPKCKRPIEKNQG 296 Score = 59.7 bits (143), Expect(2) = 2e-20 Identities = 29/56 (51%), Positives = 35/56 (62%), Gaps = 11/56 (19%) Frame = +2 Query: 2 YSRYLLRTFVESNHKIKWCPALGYENAIDFEVGSESYNV-----------CAEDAH 136 YSRYLLR++VE N K KWCPA G E A+DF GS S++V C E+AH Sbjct: 197 YSRYLLRSYVEGNRKTKWCPAPGCEYAVDFAAGSGSFDVSCLCSHSFCWNCVEEAH 252 >ref|XP_002268068.2| PREDICTED: probable E3 ubiquitin-protein ligase ARI8-like [Vitis vinifera] Length = 652 Score = 64.7 bits (156), Expect(2) = 2e-20 Identities = 27/37 (72%), Positives = 31/37 (83%) Frame = +3 Query: 138 VTKWILKNSDESENVNWILANPKACPECKRPLEEEYG 248 V KWILKNS ESEN+NWILAN K CP+CKRP+E+ G Sbjct: 334 VAKWILKNSAESENMNWILANSKPCPKCKRPIEKNQG 370 Score = 58.9 bits (141), Expect(2) = 2e-20 Identities = 28/56 (50%), Positives = 35/56 (62%), Gaps = 11/56 (19%) Frame = +2 Query: 2 YSRYLLRTFVESNHKIKWCPALGYENAIDFEVGSESYNV-----------CAEDAH 136 YSRY LR+++E N K KWCPA G + A+DF VGS SY+V C E+AH Sbjct: 271 YSRYFLRSYIEDNRKTKWCPAPGCDYAVDFIVGSGSYDVSCRCSYSFCWNCTEEAH 326 >ref|XP_003597487.1| hypothetical protein MTR_2g098580 [Medicago truncatula] gi|355486535|gb|AES67738.1| hypothetical protein MTR_2g098580 [Medicago truncatula] Length = 597 Score = 65.1 bits (157), Expect(2) = 2e-20 Identities = 27/37 (72%), Positives = 32/37 (86%) Frame = +3 Query: 138 VTKWILKNSDESENVNWILANPKACPECKRPLEEEYG 248 V+KWILKNS ESEN+NWILAN K CP+CKRP+E+ G Sbjct: 281 VSKWILKNSAESENMNWILANSKPCPKCKRPIEKNQG 317 Score = 58.5 bits (140), Expect(2) = 2e-20 Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 11/56 (19%) Frame = +2 Query: 2 YSRYLLRTFVESNHKIKWCPALGYENAIDFEVGSESYNV-----------CAEDAH 136 Y RYL+R+++E N K KWCPA G E+A++F+ G E+Y+V C E+AH Sbjct: 218 YDRYLIRSYIEDNKKTKWCPAPGCEHAVNFDAGGENYDVSCLCSYSFCWNCTEEAH 273