BLASTX nr result

ID: Coptis25_contig00025468 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025468
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518685.1| Interleukin-1 receptor-associated kinase, pu...   122   3e-26
ref|XP_002300237.1| predicted protein [Populus trichocarpa] gi|2...   120   9e-26
ref|NP_179911.1| Leucine-rich repeat protein kinase family prote...   114   8e-24
ref|XP_002883890.1| hypothetical protein ARALYDRAFT_480399 [Arab...   112   3e-23
ref|XP_002524923.1| LIM domain kinase, putative [Ricinus communi...   112   3e-23

>ref|XP_002518685.1| Interleukin-1 receptor-associated kinase, putative [Ricinus
           communis] gi|223542066|gb|EEF43610.1| Interleukin-1
           receptor-associated kinase, putative [Ricinus communis]
          Length = 736

 Score =  122 bits (306), Expect = 3e-26
 Identities = 59/96 (61%), Positives = 76/96 (79%), Gaps = 4/96 (4%)
 Frame = +3

Query: 189 FLLPSLVPSLALNPDGVLLLSFKNSVLSDPFSMLQNWNYNDETPCSWNGVLCTPVHTEWS 368
           FL+  LVP+ ALN DG+LLLSFK S LSDP S+L++WNY+D+TPCSWNGV CT +  + +
Sbjct: 17  FLVLGLVPTFALNTDGILLLSFKYSTLSDPLSVLESWNYDDDTPCSWNGVTCTELGLQGT 76

Query: 369 ----RVISLVLPNNQLSGSIPSELGMIENLRHLDLS 464
               RV SLVLP++QL GSIP +LG I++L+HLDLS
Sbjct: 77  PDMFRVTSLVLPSSQLLGSIPPDLGFIQHLKHLDLS 112


>ref|XP_002300237.1| predicted protein [Populus trichocarpa] gi|222847495|gb|EEE85042.1|
           predicted protein [Populus trichocarpa]
          Length = 757

 Score =  120 bits (302), Expect = 9e-26
 Identities = 64/110 (58%), Positives = 77/110 (70%), Gaps = 4/110 (3%)
 Frame = +3

Query: 147 SNSPNFCLRFCTIFFLLPSLVPSLALNPDGVLLLSFKNSVLSDPFSMLQNWNYNDETPCS 326
           S+S N+   F   FFLL   +P+ ALN DGVLLLSFK S+L DP S+L+ WNY D+TPC 
Sbjct: 3   SSSINYLHFFA--FFLLGIALPTFALNTDGVLLLSFKYSILRDPLSVLETWNYEDKTPCF 60

Query: 327 WNGVLCT----PVHTEWSRVISLVLPNNQLSGSIPSELGMIENLRHLDLS 464
           W GV CT    P   +  RV SLVLPN+QL GSIP +LG +E+LRHLDLS
Sbjct: 61  WKGVTCTELGLPGTPDMFRVTSLVLPNSQLLGSIPPDLGSVEHLRHLDLS 110


>ref|NP_179911.1| Leucine-rich repeat protein kinase family protein [Arabidopsis
           thaliana] gi|2642433|gb|AAB87101.1| putative
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|224589517|gb|ACN59292.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|330252344|gb|AEC07438.1| Leucine-rich repeat protein
           kinase family protein [Arabidopsis thaliana]
          Length = 773

 Score =  114 bits (285), Expect = 8e-24
 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%)
 Frame = +3

Query: 135 MSIRSNSPNFCLRFCTIFFLLPSL-VPSLALNPDGVLLLSFKNSVLSDPFSMLQNWNYND 311
           M  +S SP F + F   FF   SL + S ALN DGVLLLSFK SVL DP S+LQ+WNY+ 
Sbjct: 1   MKTQSASPFFFVSFFFFFFFFSSLFLLSSALNSDGVLLLSFKYSVLLDPLSLLQSWNYDH 60

Query: 312 ETPCSWNGVLCTPVHTEWSRVISLVLPNNQLSGSIPSELGMIENLRHLDLS 464
           + PCSW GVLC       SRV++L LPN+ L GSIPS+LG ++NL+ L+LS
Sbjct: 61  DNPCSWRGVLC----NNDSRVVTLSLPNSNLVGSIPSDLGFLQNLQSLNLS 107


>ref|XP_002883890.1| hypothetical protein ARALYDRAFT_480399 [Arabidopsis lyrata subsp.
           lyrata] gi|297329730|gb|EFH60149.1| hypothetical protein
           ARALYDRAFT_480399 [Arabidopsis lyrata subsp. lyrata]
          Length = 744

 Score =  112 bits (280), Expect = 3e-23
 Identities = 65/113 (57%), Positives = 77/113 (68%), Gaps = 4/113 (3%)
 Frame = +3

Query: 138 SIRSNSPNFCLRFCTIFFLLPSLVPSLALNPDGVLLLSFKNSVLSDPFSMLQNWNYNDET 317
           SIRSN     L F   F LLP+L+   ALN DGV LLSFK S+L+DP S+L+NWNY+DET
Sbjct: 3   SIRSN-----LFFHLFFLLLPTLIQ--ALNTDGVALLSFKYSILNDPLSVLRNWNYDDET 55

Query: 318 PCSWNGVLCTPVHT----EWSRVISLVLPNNQLSGSIPSELGMIENLRHLDLS 464
           PCSW GV CT + T    +  RV SLVLPN QL GS+  +L  I +LR LDLS
Sbjct: 56  PCSWTGVTCTELGTPNTPDMLRVTSLVLPNKQLLGSVSPDLFSILHLRILDLS 108


>ref|XP_002524923.1| LIM domain kinase, putative [Ricinus communis]
           gi|223535758|gb|EEF37420.1| LIM domain kinase, putative
           [Ricinus communis]
          Length = 785

 Score =  112 bits (280), Expect = 3e-23
 Identities = 57/94 (60%), Positives = 71/94 (75%), Gaps = 3/94 (3%)
 Frame = +3

Query: 192 LLPSLVPSLALNPDGVLLLSFKNSVLSDPFSMLQNWNYNDETPCSWNGVLCTPV---HTE 362
           LL  +V S  LN DG+LLLS K S+LSDP  +L++W+YNDETPCSWNGV C       T 
Sbjct: 21  LLLLVVQSFGLNTDGILLLSLKFSILSDPLRVLESWSYNDETPCSWNGVTCGGPGLDATS 80

Query: 363 WSRVISLVLPNNQLSGSIPSELGMIENLRHLDLS 464
           +SRV  L LPN+QL GSIP++LGMIE+L++LDLS
Sbjct: 81  FSRVTGLSLPNSQLLGSIPADLGMIEHLQNLDLS 114


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