BLASTX nr result
ID: Coptis25_contig00025468
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00025468 (465 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002518685.1| Interleukin-1 receptor-associated kinase, pu... 122 3e-26 ref|XP_002300237.1| predicted protein [Populus trichocarpa] gi|2... 120 9e-26 ref|NP_179911.1| Leucine-rich repeat protein kinase family prote... 114 8e-24 ref|XP_002883890.1| hypothetical protein ARALYDRAFT_480399 [Arab... 112 3e-23 ref|XP_002524923.1| LIM domain kinase, putative [Ricinus communi... 112 3e-23 >ref|XP_002518685.1| Interleukin-1 receptor-associated kinase, putative [Ricinus communis] gi|223542066|gb|EEF43610.1| Interleukin-1 receptor-associated kinase, putative [Ricinus communis] Length = 736 Score = 122 bits (306), Expect = 3e-26 Identities = 59/96 (61%), Positives = 76/96 (79%), Gaps = 4/96 (4%) Frame = +3 Query: 189 FLLPSLVPSLALNPDGVLLLSFKNSVLSDPFSMLQNWNYNDETPCSWNGVLCTPVHTEWS 368 FL+ LVP+ ALN DG+LLLSFK S LSDP S+L++WNY+D+TPCSWNGV CT + + + Sbjct: 17 FLVLGLVPTFALNTDGILLLSFKYSTLSDPLSVLESWNYDDDTPCSWNGVTCTELGLQGT 76 Query: 369 ----RVISLVLPNNQLSGSIPSELGMIENLRHLDLS 464 RV SLVLP++QL GSIP +LG I++L+HLDLS Sbjct: 77 PDMFRVTSLVLPSSQLLGSIPPDLGFIQHLKHLDLS 112 >ref|XP_002300237.1| predicted protein [Populus trichocarpa] gi|222847495|gb|EEE85042.1| predicted protein [Populus trichocarpa] Length = 757 Score = 120 bits (302), Expect = 9e-26 Identities = 64/110 (58%), Positives = 77/110 (70%), Gaps = 4/110 (3%) Frame = +3 Query: 147 SNSPNFCLRFCTIFFLLPSLVPSLALNPDGVLLLSFKNSVLSDPFSMLQNWNYNDETPCS 326 S+S N+ F FFLL +P+ ALN DGVLLLSFK S+L DP S+L+ WNY D+TPC Sbjct: 3 SSSINYLHFFA--FFLLGIALPTFALNTDGVLLLSFKYSILRDPLSVLETWNYEDKTPCF 60 Query: 327 WNGVLCT----PVHTEWSRVISLVLPNNQLSGSIPSELGMIENLRHLDLS 464 W GV CT P + RV SLVLPN+QL GSIP +LG +E+LRHLDLS Sbjct: 61 WKGVTCTELGLPGTPDMFRVTSLVLPNSQLLGSIPPDLGSVEHLRHLDLS 110 >ref|NP_179911.1| Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana] gi|2642433|gb|AAB87101.1| putative receptor-like protein kinase [Arabidopsis thaliana] gi|224589517|gb|ACN59292.1| leucine-rich repeat receptor-like protein kinase [Arabidopsis thaliana] gi|330252344|gb|AEC07438.1| Leucine-rich repeat protein kinase family protein [Arabidopsis thaliana] Length = 773 Score = 114 bits (285), Expect = 8e-24 Identities = 62/111 (55%), Positives = 77/111 (69%), Gaps = 1/111 (0%) Frame = +3 Query: 135 MSIRSNSPNFCLRFCTIFFLLPSL-VPSLALNPDGVLLLSFKNSVLSDPFSMLQNWNYND 311 M +S SP F + F FF SL + S ALN DGVLLLSFK SVL DP S+LQ+WNY+ Sbjct: 1 MKTQSASPFFFVSFFFFFFFFSSLFLLSSALNSDGVLLLSFKYSVLLDPLSLLQSWNYDH 60 Query: 312 ETPCSWNGVLCTPVHTEWSRVISLVLPNNQLSGSIPSELGMIENLRHLDLS 464 + PCSW GVLC SRV++L LPN+ L GSIPS+LG ++NL+ L+LS Sbjct: 61 DNPCSWRGVLC----NNDSRVVTLSLPNSNLVGSIPSDLGFLQNLQSLNLS 107 >ref|XP_002883890.1| hypothetical protein ARALYDRAFT_480399 [Arabidopsis lyrata subsp. lyrata] gi|297329730|gb|EFH60149.1| hypothetical protein ARALYDRAFT_480399 [Arabidopsis lyrata subsp. lyrata] Length = 744 Score = 112 bits (280), Expect = 3e-23 Identities = 65/113 (57%), Positives = 77/113 (68%), Gaps = 4/113 (3%) Frame = +3 Query: 138 SIRSNSPNFCLRFCTIFFLLPSLVPSLALNPDGVLLLSFKNSVLSDPFSMLQNWNYNDET 317 SIRSN L F F LLP+L+ ALN DGV LLSFK S+L+DP S+L+NWNY+DET Sbjct: 3 SIRSN-----LFFHLFFLLLPTLIQ--ALNTDGVALLSFKYSILNDPLSVLRNWNYDDET 55 Query: 318 PCSWNGVLCTPVHT----EWSRVISLVLPNNQLSGSIPSELGMIENLRHLDLS 464 PCSW GV CT + T + RV SLVLPN QL GS+ +L I +LR LDLS Sbjct: 56 PCSWTGVTCTELGTPNTPDMLRVTSLVLPNKQLLGSVSPDLFSILHLRILDLS 108 >ref|XP_002524923.1| LIM domain kinase, putative [Ricinus communis] gi|223535758|gb|EEF37420.1| LIM domain kinase, putative [Ricinus communis] Length = 785 Score = 112 bits (280), Expect = 3e-23 Identities = 57/94 (60%), Positives = 71/94 (75%), Gaps = 3/94 (3%) Frame = +3 Query: 192 LLPSLVPSLALNPDGVLLLSFKNSVLSDPFSMLQNWNYNDETPCSWNGVLCTPV---HTE 362 LL +V S LN DG+LLLS K S+LSDP +L++W+YNDETPCSWNGV C T Sbjct: 21 LLLLVVQSFGLNTDGILLLSLKFSILSDPLRVLESWSYNDETPCSWNGVTCGGPGLDATS 80 Query: 363 WSRVISLVLPNNQLSGSIPSELGMIENLRHLDLS 464 +SRV L LPN+QL GSIP++LGMIE+L++LDLS Sbjct: 81 FSRVTGLSLPNSQLLGSIPADLGMIEHLQNLDLS 114