BLASTX nr result

ID: Coptis25_contig00025434 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025434
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522517.1| Ethylene-responsive transcription factor, pu...   160   3e-37
gb|ADC94860.1| ERF3 transcription factor [Vitis pseudoreticulata]     158   1e-36
emb|CAN84146.1| hypothetical protein VITISV_020434 [Vitis vinifera]   153   3e-35
ref|XP_002331947.1| AP2/ERF domain-containing transcription fact...   150   3e-34
gb|AFG26327.1| ethylene response factor ERF2 [Eriobotrya japonica]    149   8e-34

>ref|XP_002522517.1| Ethylene-responsive transcription factor, putative [Ricinus
           communis] gi|223538208|gb|EEF39817.1|
           Ethylene-responsive transcription factor, putative
           [Ricinus communis]
          Length = 173

 Score =  160 bits (405), Expect = 3e-37
 Identities = 83/132 (62%), Positives = 97/132 (73%), Gaps = 1/132 (0%)
 Frame = +1

Query: 55  SENELPLNENDSQDMVLYEVLNEAMAINSSDSRIPSQERNRTGM-KPAREIGKKHYRGVR 231
           S+NELP NENDSQDMV+Y+++NE     ++ +  P  + N + M  PA+ I KKHYRGVR
Sbjct: 5   SQNELPFNENDSQDMVIYQMINEGATAPNNSNMPPRSQINSSHMFPPAKVIAKKHYRGVR 64

Query: 232 RRPWGKYAAEIRDSSRHGARVWLGTFETXXXXXXXXXXXXFRMRGAKALLNFPAEVVLAS 411
           RRPWGKYAAEIRDS+RHGARVWLGTFET            FRMRGAKALLNFPAEVV A+
Sbjct: 65  RRPWGKYAAEIRDSARHGARVWLGTFETAEEAALAYDRAAFRMRGAKALLNFPAEVVAAT 124

Query: 412 SAGERFKVNTSL 447
           SAG  FK N +L
Sbjct: 125 SAG--FKPNLNL 134


>gb|ADC94860.1| ERF3 transcription factor [Vitis pseudoreticulata]
          Length = 182

 Score =  158 bits (399), Expect = 1e-36
 Identities = 83/123 (67%), Positives = 92/123 (74%), Gaps = 4/123 (3%)
 Frame = +1

Query: 58  ENELPLNENDSQDMVLYEVLNEAMAINSSDSRIPSQERNRT----GMKPAREIGKKHYRG 225
           ++ELPLNENDSQDMVLYEVLNEA A+N S   IP  +   T     ++PAR I KKHYRG
Sbjct: 6   QSELPLNENDSQDMVLYEVLNEAFALNKSI--IPPIKHQTTPTSNALEPARTIAKKHYRG 63

Query: 226 VRRRPWGKYAAEIRDSSRHGARVWLGTFETXXXXXXXXXXXXFRMRGAKALLNFPAEVVL 405
           VRRRPWGKYAAEIRDS++HGAR WLGTFET            FRMRG+KALLNFPAEVV 
Sbjct: 64  VRRRPWGKYAAEIRDSAKHGARTWLGTFETAEEAALAYDRAAFRMRGSKALLNFPAEVVA 123

Query: 406 ASS 414
           ASS
Sbjct: 124 ASS 126


>emb|CAN84146.1| hypothetical protein VITISV_020434 [Vitis vinifera]
          Length = 153

 Score =  153 bits (387), Expect = 3e-35
 Identities = 80/123 (65%), Positives = 92/123 (74%), Gaps = 4/123 (3%)
 Frame = +1

Query: 58  ENELPLNENDSQDMVLYEVLNEAMAINSSDSRIPSQERNRT----GMKPAREIGKKHYRG 225
           ++ELPLNENDSQDMV+Y+VLNEA A+N+S   IP  +R  T     ++PAR I KKHYRG
Sbjct: 6   QSELPLNENDSQDMVIYQVLNEAFALNNSI--IPPIKRQTTPTSSALEPARTIAKKHYRG 63

Query: 226 VRRRPWGKYAAEIRDSSRHGARVWLGTFETXXXXXXXXXXXXFRMRGAKALLNFPAEVVL 405
           VRRRPWGKYAAEIRDS++HGAR WLGT E             FRMRG+KALLNFPAEVV 
Sbjct: 64  VRRRPWGKYAAEIRDSAKHGARTWLGTXEXAEEAALAYDRAAFRMRGSKALLNFPAEVVA 123

Query: 406 ASS 414
           ASS
Sbjct: 124 ASS 126


>ref|XP_002331947.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222874724|gb|EEF11855.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 183

 Score =  150 bits (379), Expect = 3e-34
 Identities = 80/121 (66%), Positives = 90/121 (74%), Gaps = 3/121 (2%)
 Frame = +1

Query: 61  NELPLNENDSQDMVLYEVLNEAMAINSSDSRI-PSQERNRTGM-KPARE-IGKKHYRGVR 231
           +ELP NENDSQDMV+Y+++NEA A NSS   I P  + N +GM +PAR  I KKHYRGVR
Sbjct: 8   HELPFNENDSQDMVIYQMINEASAPNSSTYNILPRSQINTSGMLQPARTVIAKKHYRGVR 67

Query: 232 RRPWGKYAAEIRDSSRHGARVWLGTFETXXXXXXXXXXXXFRMRGAKALLNFPAEVVLAS 411
           RRPWGKYAAEIRDS RHGAR+WLGTFET            F MRG+KALLNFPAEVV A 
Sbjct: 68  RRPWGKYAAEIRDSKRHGARIWLGTFETAEAAALAYDRAAFNMRGSKALLNFPAEVVAAI 127

Query: 412 S 414
           S
Sbjct: 128 S 128


>gb|AFG26327.1| ethylene response factor ERF2 [Eriobotrya japonica]
          Length = 204

 Score =  149 bits (375), Expect = 8e-34
 Identities = 75/122 (61%), Positives = 90/122 (73%), Gaps = 3/122 (2%)
 Frame = +1

Query: 58  ENELPLNENDSQDMVLYEVLNEAMAINSSDSRIPSQE---RNRTGMKPAREIGKKHYRGV 228
           +NELPLNENDSQDMV+Y+VL+EA ++  + S +P +    R    ++P + IGKKHYRGV
Sbjct: 22  QNELPLNENDSQDMVIYQVLHEATSL--TPSLLPQRHHIHRQPNRLEPTKNIGKKHYRGV 79

Query: 229 RRRPWGKYAAEIRDSSRHGARVWLGTFETXXXXXXXXXXXXFRMRGAKALLNFPAEVVLA 408
           RRRPWGKYAAEIRDS+R GARVWLGTF T            FRMRG KA+LNFPAE+V A
Sbjct: 80  RRRPWGKYAAEIRDSARQGARVWLGTFNTAEEAALAYDRAAFRMRGTKAMLNFPAEIVAA 139

Query: 409 SS 414
           SS
Sbjct: 140 SS 141


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