BLASTX nr result

ID: Coptis25_contig00025433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025433
         (917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28216.3| unnamed protein product [Vitis vinifera]              244   3e-62
ref|XP_002282238.1| PREDICTED: WD repeat-containing protein 11-l...   244   3e-62
ref|XP_002325208.1| predicted protein [Populus trichocarpa] gi|2...   244   3e-62
ref|XP_002527186.1| nucleotide binding protein, putative [Ricinu...   239   7e-61
ref|XP_004166124.1| PREDICTED: WD repeat-containing protein 11-l...   238   1e-60

>emb|CBI28216.3| unnamed protein product [Vitis vinifera]
          Length = 1250

 Score =  244 bits (622), Expect = 3e-62
 Identities = 122/174 (70%), Positives = 135/174 (77%)
 Frame = +1

Query: 1    KVVAANMVRTDKSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHLQGSDYARVLQ 180
            KVVAANMVR DKSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHL+GSDYARVLQ
Sbjct: 1077 KVVAANMVRIDKSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHLKGSDYARVLQ 1136

Query: 181  RWADHLLHTEHNIWRALILYVXXXXXXXXXXXXRNAQQPDTAAMFLLACHETNAEISKSR 360
            RWADH+LHTEHNIWRALILYV            R A+ PDTAAMF++AC E + EI  + 
Sbjct: 1137 RWADHVLHTEHNIWRALILYVAAGALQEALAALREAKLPDTAAMFIVACREIHEEIISNL 1196

Query: 361  PLDEHLSPSDDEKQPFFLPGLNLRQEDVIAVGEYYGQYQRKLVHLCMDLEPLFD 522
               +  S S  + +   LPGL+   EDVIAVGE+Y QYQRKLVHLCMD +P FD
Sbjct: 1197 GDSDDESKSSTKAKQLNLPGLDPENEDVIAVGEFYEQYQRKLVHLCMDSQPSFD 1250


>ref|XP_002282238.1| PREDICTED: WD repeat-containing protein 11-like [Vitis vinifera]
          Length = 1317

 Score =  244 bits (622), Expect = 3e-62
 Identities = 122/174 (70%), Positives = 135/174 (77%)
 Frame = +1

Query: 1    KVVAANMVRTDKSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHLQGSDYARVLQ 180
            KVVAANMVR DKSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHL+GSDYARVLQ
Sbjct: 1144 KVVAANMVRIDKSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHLKGSDYARVLQ 1203

Query: 181  RWADHLLHTEHNIWRALILYVXXXXXXXXXXXXRNAQQPDTAAMFLLACHETNAEISKSR 360
            RWADH+LHTEHNIWRALILYV            R A+ PDTAAMF++AC E + EI  + 
Sbjct: 1204 RWADHVLHTEHNIWRALILYVAAGALQEALAALREAKLPDTAAMFIVACREIHEEIISNL 1263

Query: 361  PLDEHLSPSDDEKQPFFLPGLNLRQEDVIAVGEYYGQYQRKLVHLCMDLEPLFD 522
               +  S S  + +   LPGL+   EDVIAVGE+Y QYQRKLVHLCMD +P FD
Sbjct: 1264 GDSDDESKSSTKAKQLNLPGLDPENEDVIAVGEFYEQYQRKLVHLCMDSQPSFD 1317


>ref|XP_002325208.1| predicted protein [Populus trichocarpa] gi|222866642|gb|EEF03773.1|
            predicted protein [Populus trichocarpa]
          Length = 1311

 Score =  244 bits (622), Expect = 3e-62
 Identities = 122/174 (70%), Positives = 133/174 (76%)
 Frame = +1

Query: 1    KVVAANMVRTDKSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHLQGSDYARVLQ 180
            KVVAANMV+TD+SLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHL GSDYARVL 
Sbjct: 1138 KVVAANMVQTDRSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHLSGSDYARVLL 1197

Query: 181  RWADHLLHTEHNIWRALILYVXXXXXXXXXXXXRNAQQPDTAAMFLLACHETNAEISKSR 360
            RWA+H+LH EHNIWRALILYV            R  QQPDTAAMF+LACHE +A+   + 
Sbjct: 1198 RWANHVLHAEHNIWRALILYVAAGALQDALAALRETQQPDTAAMFILACHEGHAQFISNL 1257

Query: 361  PLDEHLSPSDDEKQPFFLPGLNLRQEDVIAVGEYYGQYQRKLVHLCMDLEPLFD 522
               +  S S  +     LPGLN   EDVIAVGEYYGQYQRKLVHLCMD +P  D
Sbjct: 1258 GNSDDESGSSIKDTLVGLPGLNPENEDVIAVGEYYGQYQRKLVHLCMDSQPFSD 1311


>ref|XP_002527186.1| nucleotide binding protein, putative [Ricinus communis]
            gi|223533451|gb|EEF35199.1| nucleotide binding protein,
            putative [Ricinus communis]
          Length = 1357

 Score =  239 bits (610), Expect = 7e-61
 Identities = 123/179 (68%), Positives = 135/179 (75%), Gaps = 5/179 (2%)
 Frame = +1

Query: 1    KVVAANMVRTDKSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHLQGSDYARVLQ 180
            KVVAANMVRTD+SLSGTHLLCAVGR+QEACSQLQDAGCWTDAATLAATHL+GSDYARVLQ
Sbjct: 1185 KVVAANMVRTDRSLSGTHLLCAVGRHQEACSQLQDAGCWTDAATLAATHLRGSDYARVLQ 1244

Query: 181  RWADHLLHTEHNIWRALILYVXXXXXXXXXXXXRNAQQPDTAAMFLLACHETNAEISKSR 360
            RWA+H+L  EHNIWRAL+L+V            R AQQPDTAAMF+LAC E + EI    
Sbjct: 1245 RWAEHVLRAEHNIWRALVLFVAAGALQEALAALREAQQPDTAAMFILACREIHEEII--- 1301

Query: 361  PLDEHLSPSDDEK-----QPFFLPGLNLRQEDVIAVGEYYGQYQRKLVHLCMDLEPLFD 522
                +L  SDDE          LPGLN   EDVIAVGEY+GQYQRKLVHLCMD +P  D
Sbjct: 1302 ---SNLGNSDDESGTVKDTQVDLPGLNPENEDVIAVGEYFGQYQRKLVHLCMDSQPFSD 1357


>ref|XP_004166124.1| PREDICTED: WD repeat-containing protein 11-like, partial [Cucumis
            sativus]
          Length = 844

 Score =  238 bits (607), Expect = 1e-60
 Identities = 120/175 (68%), Positives = 135/175 (77%), Gaps = 1/175 (0%)
 Frame = +1

Query: 1    KVVAANMVRTDKSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHLQGSDYARVLQ 180
            KVVAANMVRTD+SLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHL+GSDYARVL 
Sbjct: 670  KVVAANMVRTDRSLSGTHLLCAVGRYQEACSQLQDAGCWTDAATLAATHLKGSDYARVLL 729

Query: 181  RWADHLLHTEHNIWRALILYVXXXXXXXXXXXXRNAQQPDTAAMFLLACHETNAE-ISKS 357
            RWA+H+ H+EHNIWRALILYV            R +QQPDTAAMF+LAC E +AE IS  
Sbjct: 730  RWANHVFHSEHNIWRALILYVAAGALQEALAALRESQQPDTAAMFILACREIHAEFISNL 789

Query: 358  RPLDEHLSPSDDEKQPFFLPGLNLRQEDVIAVGEYYGQYQRKLVHLCMDLEPLFD 522
               D+    +  + +   LPGL+   +DV+AVGEYYGQYQRKLVHLCMD  P  D
Sbjct: 790  ENSDDESDSNALKNKLLKLPGLDPENDDVVAVGEYYGQYQRKLVHLCMDSLPYSD 844


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