BLASTX nr result

ID: Coptis25_contig00025413 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025413
         (665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltran...   230   2e-58
emb|CBI21093.3| unnamed protein product [Vitis vinifera]              230   2e-58
gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelic...   213   3e-53
dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea ...   211   8e-53
ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|2...   202   6e-50

>ref|XP_002282953.2| PREDICTED: probable homogentisate phytyltransferase 1,
           chloroplastic-like [Vitis vinifera]
          Length = 397

 Score =  230 bits (586), Expect = 2e-58
 Identities = 105/180 (58%), Positives = 144/180 (80%)
 Frame = +2

Query: 125 ISKHLRAFYNFTRPYTIFGTIVGVTTMSLLPLQTFSDLSPTFFVGLLKAVVPMVLINIYV 304
           +SK LRAFY F+RP+TI GT++G+T++SLLPL+T SDLSP FFVGLLKA+VP VL+NIYV
Sbjct: 97  VSKQLRAFYLFSRPHTIIGTVIGITSVSLLPLETISDLSPAFFVGLLKAMVPSVLMNIYV 156

Query: 305 VGINQLSDIGIDKINKPTLPLASGEFSFATGATIVALSAILSIGMGVMFKSLPLLCAIAT 484
           VG+NQ+ D+ IDK+NKP LPLASG+FS  TG+ IV +S ++S+GMG+MF+S PL CA+  
Sbjct: 157 VGLNQIFDVEIDKVNKPELPLASGDFSMETGSQIVFISLLMSVGMGIMFQSPPLFCALLI 216

Query: 485 FFFSGTVYSVKLPLLRWKENAFLNALCVVVMRSLAVPLGIFSYVQTSVLGRQLVFTKPVI 664
            F  GT YS+++PLLRWK    L A C++++R++ V L  F+++Q  VLGR +V+TK V+
Sbjct: 217 SFLLGTAYSIEIPLLRWKRYPLLAASCILIVRAIVVQLAFFAHIQKHVLGRSIVYTKSVV 276


>emb|CBI21093.3| unnamed protein product [Vitis vinifera]
          Length = 398

 Score =  230 bits (586), Expect = 2e-58
 Identities = 105/180 (58%), Positives = 144/180 (80%)
 Frame = +2

Query: 125 ISKHLRAFYNFTRPYTIFGTIVGVTTMSLLPLQTFSDLSPTFFVGLLKAVVPMVLINIYV 304
           +SK LRAFY F+RP+TI GT++G+T++SLLPL+T SDLSP FFVGLLKA+VP VL+NIYV
Sbjct: 73  VSKQLRAFYLFSRPHTIIGTVIGITSVSLLPLETISDLSPAFFVGLLKAMVPSVLMNIYV 132

Query: 305 VGINQLSDIGIDKINKPTLPLASGEFSFATGATIVALSAILSIGMGVMFKSLPLLCAIAT 484
           VG+NQ+ D+ IDK+NKP LPLASG+FS  TG+ IV +S ++S+GMG+MF+S PL CA+  
Sbjct: 133 VGLNQIFDVEIDKVNKPELPLASGDFSMETGSQIVFISLLMSVGMGIMFQSPPLFCALLI 192

Query: 485 FFFSGTVYSVKLPLLRWKENAFLNALCVVVMRSLAVPLGIFSYVQTSVLGRQLVFTKPVI 664
            F  GT YS+++PLLRWK    L A C++++R++ V L  F+++Q  VLGR +V+TK V+
Sbjct: 193 SFLLGTAYSIEIPLLRWKRYPLLAASCILIVRAIVVQLAFFAHIQKHVLGRSIVYTKSVV 252


>gb|ACB42448.1| homogentisate geranylgeranyl transferase [Angelica gigas]
          Length = 317

 Score =  213 bits (542), Expect = 3e-53
 Identities = 99/180 (55%), Positives = 138/180 (76%)
 Frame = +2

Query: 116 WTKISKHLRAFYNFTRPYTIFGTIVGVTTMSLLPLQTFSDLSPTFFVGLLKAVVPMVLIN 295
           W K+     AFY FTRP+TI G+IVG+T++SLLPL +F DLSP FFVGLLK ++P+V +N
Sbjct: 18  WRKVD----AFYRFTRPHTIIGSIVGITSVSLLPLVSFEDLSPAFFVGLLKVMIPIVCVN 73

Query: 296 IYVVGINQLSDIGIDKINKPTLPLASGEFSFATGATIVALSAILSIGMGVMFKSLPLLCA 475
           IYVVG+NQL D+ IDK+NKP LP+ASGE+S  TG  IV+   ++SI MG+MF+S P+L  
Sbjct: 74  IYVVGLNQLYDVEIDKVNKPNLPIASGEYSMETGKAIVSAFGLMSIIMGIMFQSPPVLYC 133

Query: 476 IATFFFSGTVYSVKLPLLRWKENAFLNALCVVVMRSLAVPLGIFSYVQTSVLGRQLVFTK 655
           +   FF GT YS+ +PL RWK+NAFL A+C+V++R++ V L +F ++Q  VLGR ++F++
Sbjct: 134 LLVCFFFGTAYSIDVPLFRWKKNAFLAAMCIVIVRAITVQLTVFYHIQQYVLGRPVLFSR 193


>dbj|BAH10642.1| homogentisate geranylgeranyl transferase [Hevea brasiliensis]
          Length = 411

 Score =  211 bits (538), Expect = 8e-53
 Identities = 102/197 (51%), Positives = 145/197 (73%)
 Frame = +2

Query: 74  EDGDAFIQESSISSWTKISKHLRAFYNFTRPYTIFGTIVGVTTMSLLPLQTFSDLSPTFF 253
           EDGD     S       I +HL + Y F+RP+T+ GTI+G+T++SLLP++T  DLSPT+F
Sbjct: 95  EDGDDICSSSKRGP---ILEHLNSLYQFSRPHTVIGTIIGITSVSLLPVETIVDLSPTYF 151

Query: 254 VGLLKAVVPMVLINIYVVGINQLSDIGIDKINKPTLPLASGEFSFATGATIVALSAILSI 433
           +GLLKA+VP VL+NIYVVG+NQL D+ IDK+NKP LPLASG+FS ATG  IV+ S +LS+
Sbjct: 152 IGLLKALVPSVLMNIYVVGLNQLFDVEIDKVNKPYLPLASGKFSMATGILIVSASLLLSL 211

Query: 434 GMGVMFKSLPLLCAIATFFFSGTVYSVKLPLLRWKENAFLNALCVVVMRSLAVPLGIFSY 613
            MG+ F+S PLL A+   F  G+VYS++LP LRWK++AFL A C++++R++ V L  F +
Sbjct: 212 YMGITFQSPPLLAALLISFALGSVYSIELPFLRWKKHAFLAASCILIVRAMVVQLAFFVH 271

Query: 614 VQTSVLGRQLVFTKPVI 664
           +Q  VLG+ +   + ++
Sbjct: 272 IQKFVLGKSIFIPRSLM 288


>ref|XP_002324898.1| predicted protein [Populus trichocarpa] gi|222866332|gb|EEF03463.1|
           predicted protein [Populus trichocarpa]
          Length = 284

 Score =  202 bits (513), Expect = 6e-50
 Identities = 94/176 (53%), Positives = 134/176 (76%)
 Frame = +2

Query: 137 LRAFYNFTRPYTIFGTIVGVTTMSLLPLQTFSDLSPTFFVGLLKAVVPMVLINIYVVGIN 316
           L +FY F+RP+T+ GT++G+T++SLLP++T S+LSPTFF+GLLKA+VP VL+NIYVVG+N
Sbjct: 1   LHSFYQFSRPHTVIGTLIGITSVSLLPVETISELSPTFFMGLLKALVPSVLMNIYVVGLN 60

Query: 317 QLSDIGIDKINKPTLPLASGEFSFATGATIVALSAILSIGMGVMFKSLPLLCAIATFFFS 496
           QL D+ IDK+NKP LPLASG+FS  TG  IV+ S + S  MG+MF+S  L  A+      
Sbjct: 61  QLFDVEIDKVNKPYLPLASGDFSMGTGVAIVSASLLASFAMGIMFQSPLLFSALLISCVL 120

Query: 497 GTVYSVKLPLLRWKENAFLNALCVVVMRSLAVPLGIFSYVQTSVLGRQLVFTKPVI 664
           G+VYS++LP LRWK+ AFL A C++++R++ V L  F ++Q  VLG+  V T+ ++
Sbjct: 121 GSVYSIELPFLRWKKQAFLAATCIMIVRAIVVQLAFFVHMQKFVLGKTTVVTRSLV 176


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