BLASTX nr result

ID: Coptis25_contig00025410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025410
         (210 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331670.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
gb|AFK43870.1| unknown [Medicago truncatula]                          105   4e-21
ref|XP_003634196.1| PREDICTED: MATE efflux family protein 6 [Vit...   105   4e-21
ref|XP_003620351.1| hypothetical protein MTR_6g081810 [Medicago ...   105   4e-21
ref|XP_003620349.1| hypothetical protein MTR_6g081780 [Medicago ...   105   4e-21

>ref|XP_002331670.1| predicted protein [Populus trichocarpa] gi|222874089|gb|EEF11220.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score =  111 bits (277), Expect = 7e-23
 Identities = 53/69 (76%), Positives = 61/69 (88%)
 Frame = -3

Query: 208 LELWSFELMVLISGFLPNAKLETSVLSISVNTCAIIYTIPAGLSGTVSTRVSNELGAGHP 29
           LE+WSFE+MVL+SG LPN KLETSVLSIS+NTCA+ Y IP GLS  +STRVSNELGAG P
Sbjct: 273 LEIWSFEMMVLLSGLLPNPKLETSVLSISLNTCALTYMIPLGLSAAISTRVSNELGAGKP 332

Query: 28  RAAKLAVCV 2
           +AA+LAVCV
Sbjct: 333 QAARLAVCV 341


>gb|AFK43870.1| unknown [Medicago truncatula]
          Length = 449

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/69 (75%), Positives = 61/69 (88%)
 Frame = -3

Query: 208 LELWSFELMVLISGFLPNAKLETSVLSISVNTCAIIYTIPAGLSGTVSTRVSNELGAGHP 29
           LE+WSFELMVL+SG LPN KLETSVLSIS+NT A+++ IP GLSG +S RVSNELGAG+P
Sbjct: 235 LEMWSFELMVLLSGLLPNPKLETSVLSISLNTSALVWMIPFGLSGAISIRVSNELGAGNP 294

Query: 28  RAAKLAVCV 2
           RAA+LAV V
Sbjct: 295 RAARLAVYV 303


>ref|XP_003634196.1| PREDICTED: MATE efflux family protein 6 [Vitis vinifera]
          Length = 399

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/69 (75%), Positives = 60/69 (86%)
 Frame = -3

Query: 208 LELWSFELMVLISGFLPNAKLETSVLSISVNTCAIIYTIPAGLSGTVSTRVSNELGAGHP 29
           LE+WSFELMVL+SG LPN KL+TSVLSI +NT A ++ IP GLSG VSTRVSNELGAGHP
Sbjct: 183 LEMWSFELMVLLSGLLPNPKLQTSVLSICLNTAATVWMIPFGLSGAVSTRVSNELGAGHP 242

Query: 28  RAAKLAVCV 2
           +AA+LAV V
Sbjct: 243 QAARLAVFV 251


>ref|XP_003620351.1| hypothetical protein MTR_6g081810 [Medicago truncatula]
           gi|355495366|gb|AES76569.1| hypothetical protein
           MTR_6g081810 [Medicago truncatula]
          Length = 496

 Score =  105 bits (262), Expect = 4e-21
 Identities = 52/69 (75%), Positives = 61/69 (88%)
 Frame = -3

Query: 208 LELWSFELMVLISGFLPNAKLETSVLSISVNTCAIIYTIPAGLSGTVSTRVSNELGAGHP 29
           LE+WSFELMVL+SG LPN KLETSVLSIS+NT A+++ IP GLSG +S RVSNELGAG+P
Sbjct: 282 LEMWSFELMVLLSGLLPNPKLETSVLSISLNTSALVWMIPFGLSGAISIRVSNELGAGNP 341

Query: 28  RAAKLAVCV 2
           RAA+LAV V
Sbjct: 342 RAARLAVYV 350


>ref|XP_003620349.1| hypothetical protein MTR_6g081780 [Medicago truncatula]
           gi|355495364|gb|AES76567.1| hypothetical protein
           MTR_6g081780 [Medicago truncatula]
          Length = 517

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/69 (72%), Positives = 61/69 (88%)
 Frame = -3

Query: 208 LELWSFELMVLISGFLPNAKLETSVLSISVNTCAIIYTIPAGLSGTVSTRVSNELGAGHP 29
           LE+WSFEL+VL+SG LPN KLETSVLSI +NT A+++ IP GLSG +S RVSNELGAG+P
Sbjct: 266 LEIWSFELVVLLSGLLPNPKLETSVLSICLNTTAVVWMIPFGLSGAISVRVSNELGAGNP 325

Query: 28  RAAKLAVCV 2
           +AA+LAVCV
Sbjct: 326 QAARLAVCV 334


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