BLASTX nr result

ID: Coptis25_contig00025395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00025395
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320489.1| argonaute protein group [Populus trichocarpa...   240   1e-61
ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis ...   236   1e-60
ref|XP_004140126.1| PREDICTED: protein argonaute 16-like [Cucumi...   230   8e-59
gb|AFV15385.1| AGO6 [Solanum lycopersicum]                            225   3e-57
ref|XP_004156089.1| PREDICTED: protein argonaute 16-like [Cucumi...   224   7e-57

>ref|XP_002320489.1| argonaute protein group [Populus trichocarpa]
           gi|222861262|gb|EEE98804.1| argonaute protein group
           [Populus trichocarpa]
          Length = 869

 Score =  240 bits (612), Expect = 1e-61
 Identities = 117/141 (82%), Positives = 130/141 (92%), Gaps = 1/141 (0%)
 Frame = -3

Query: 493 ALALKGIETEN-TGDALRVLDIILRQQAAKRGCLLVRQSFFHDDVRNFVDVGGGVTACRG 317
           ALALKGIE +N T DALRVLDIILRQQAA RGCLLVRQSFFHDD RNF DVGGGVT  +G
Sbjct: 148 ALALKGIEIDNSTQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRNFNDVGGGVTGVKG 207

Query: 316 FHSSFRTTQGGLSLNMDVSSTMILTPGPVLDFLLTNQNLRDPRQIDWGRAKKMLKNLRVK 137
           FHSSFRTTQGGLSLNMDVS+TMILTPGPV+DFL+ NQN+R+PR +DW +A++MLKNLRVK
Sbjct: 208 FHSSFRTTQGGLSLNMDVSTTMILTPGPVIDFLIVNQNVREPRYVDWVKARRMLKNLRVK 267

Query: 136 TRHNNMEFKIIGISEKPCNQQ 74
           T+HNNMEFKIIG+SEKPCNQQ
Sbjct: 268 TKHNNMEFKIIGLSEKPCNQQ 288


>ref|XP_002271447.2| PREDICTED: protein argonaute 16-like [Vitis vinifera]
          Length = 960

 Score =  236 bits (602), Expect = 1e-60
 Identities = 114/140 (81%), Positives = 126/140 (90%), Gaps = 1/140 (0%)
 Frame = -3

Query: 490 LALKGIETENTG-DALRVLDIILRQQAAKRGCLLVRQSFFHDDVRNFVDVGGGVTACRGF 314
           LALKG E +N   DALRVLDIILRQQAA RGCLLVRQSFFHDD R+F DVGGGVT CRGF
Sbjct: 241 LALKGSEVDNNAQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRHFTDVGGGVTGCRGF 300

Query: 313 HSSFRTTQGGLSLNMDVSSTMILTPGPVLDFLLTNQNLRDPRQIDWGRAKKMLKNLRVKT 134
           HSSFRTTQGGLSLNMDVS+TMILTPGPV+DFLL NQN+RDPR I+W +AKKMLKN+R+KT
Sbjct: 301 HSSFRTTQGGLSLNMDVSTTMILTPGPVIDFLLANQNIRDPRHINWEKAKKMLKNMRIKT 360

Query: 133 RHNNMEFKIIGISEKPCNQQ 74
           +H+NMEFKI G+SEKPCN Q
Sbjct: 361 KHSNMEFKITGLSEKPCNLQ 380


>ref|XP_004140126.1| PREDICTED: protein argonaute 16-like [Cucumis sativus]
          Length = 904

 Score =  230 bits (587), Expect = 8e-59
 Identities = 114/140 (81%), Positives = 122/140 (87%), Gaps = 2/140 (1%)
 Frame = -3

Query: 487 ALKGIETEN--TGDALRVLDIILRQQAAKRGCLLVRQSFFHDDVRNFVDVGGGVTACRGF 314
           ALKG E +N  T DALRVLDIILRQQAA RGCLLVRQSFFHDD RNF DVGGGVT  RGF
Sbjct: 187 ALKGSEEDNGSTQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRNFADVGGGVTGVRGF 246

Query: 313 HSSFRTTQGGLSLNMDVSSTMILTPGPVLDFLLTNQNLRDPRQIDWGRAKKMLKNLRVKT 134
           HSSFR  Q GLSLNMDVS+TMIL PGPV+DFL+ NQN+R+PR IDWG+AKKMLKNLRVK 
Sbjct: 247 HSSFRLAQDGLSLNMDVSTTMILKPGPVIDFLIANQNVREPRYIDWGKAKKMLKNLRVKA 306

Query: 133 RHNNMEFKIIGISEKPCNQQ 74
           RH NMEFKIIG+SEKPCNQQ
Sbjct: 307 RHRNMEFKIIGLSEKPCNQQ 326


>gb|AFV15385.1| AGO6 [Solanum lycopersicum]
          Length = 903

 Score =  225 bits (574), Expect = 3e-57
 Identities = 105/139 (75%), Positives = 123/139 (88%)
 Frame = -3

Query: 490 LALKGIETENTGDALRVLDIILRQQAAKRGCLLVRQSFFHDDVRNFVDVGGGVTACRGFH 311
           LAL+G + EN  DALRVLDIILRQ+AA RGCLLVRQSFFHDD RNF DVGGGV +CRG H
Sbjct: 185 LALQGADPENVQDALRVLDIILRQKAANRGCLLVRQSFFHDDSRNFTDVGGGVMSCRGLH 244

Query: 310 SSFRTTQGGLSLNMDVSSTMILTPGPVLDFLLTNQNLRDPRQIDWGRAKKMLKNLRVKTR 131
           SSFR T GGL+LNMDVS+TMIL+PGPV+DFLL NQN+++PR IDW RAK+MLKN+RVK +
Sbjct: 245 SSFRPTDGGLTLNMDVSTTMILSPGPVIDFLLANQNVKEPRYIDWARAKRMLKNMRVKAK 304

Query: 130 HNNMEFKIIGISEKPCNQQ 74
           H+N EFKIIG+++KPCNQQ
Sbjct: 305 HDNREFKIIGLTDKPCNQQ 323


>ref|XP_004156089.1| PREDICTED: protein argonaute 16-like [Cucumis sativus]
          Length = 903

 Score =  224 bits (570), Expect = 7e-57
 Identities = 113/140 (80%), Positives = 121/140 (86%), Gaps = 2/140 (1%)
 Frame = -3

Query: 487 ALKGIETEN--TGDALRVLDIILRQQAAKRGCLLVRQSFFHDDVRNFVDVGGGVTACRGF 314
           ALKG E +N  T DALRVLDIILRQQAA RGCLLVRQSFFHDD RNF DVGGGVT  RGF
Sbjct: 187 ALKGSEEDNGSTQDALRVLDIILRQQAANRGCLLVRQSFFHDDSRNFADVGGGVTGVRGF 246

Query: 313 HSSFRTTQGGLSLNMDVSSTMILTPGPVLDFLLTNQNLRDPRQIDWGRAKKMLKNLRVKT 134
           HSSFR  Q GLSLNMDVS+TMIL PGPV+DFL+ NQN+R+PR IDWGR +KMLKNLRVK 
Sbjct: 247 HSSFRLAQDGLSLNMDVSTTMILKPGPVIDFLIANQNVREPRYIDWGR-QKMLKNLRVKA 305

Query: 133 RHNNMEFKIIGISEKPCNQQ 74
           RH NMEFKIIG+SEKPCNQQ
Sbjct: 306 RHRNMEFKIIGLSEKPCNQQ 325


Top